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The map label for this gene is yjcF [C]

Identifier: 170077495

GI number: 170077495

Start: 903161

End: 904024

Strand: Direct

Name: yjcF [C]

Synonym: SYNPCC7002_A0873

Alternate gene names: 170077495

Gene position: 903161-904024 (Clockwise)

Preceding gene: 170077494

Following gene: 170077496

Centisome position: 30.02

GC content: 52.55

Gene sequence:

>864_bases
TTGTTTTGTGGGTCGAAATCCATGAATGTTCAACAATTACTACGCGCCTACGAACATGGGGAACGAAACTTTGCCGGAAT
CAACCTGCAGGGAGCCGATCTCCGGGGTGAGGCATTAATTGGCGTTAACTTCCAGGGGGCCAACCTCATGGGTGCGAATC
TGAGTCGAACATTTTTACTGAAAGCCGATTTGTCTGGGGCGGCATTAAATTGGGCAAACCTCGCCCATGCCAAACTAAAC
GATGCCCAGCTTGTTGGTGCAGATTTAACGAAAGCGACCTTAGACGGGGCCTTTATGGTCAACGCTCAACTGATCGAAGC
GCGTTTGTGTGGGGCCAGCCTAGACCATACCAATTTACGGGGCGGGAACCTCCGGCGGGCTAATTTGTGTGGCGCGAATC
TCGCCCGGGTGAACCTATGCCAGGCAAACTTAAATCAGGCAAATTTAGCCTGGGTCAATGCCCAGGAAGCACGCCTAGGC
CATGCGGATCTCCAGCACGCTAATTTACACCATGGCAATTTTAGCCGCGCTTTTTTGCGGGATGTGAATTTGCTGGGTAT
GGATTTAGCCGGGCTAAATTTTTCAGGGGCAAAACTTTATGGCGCTAATCTCCGGCAGGCGAATCTCCAGGGGAGTAATC
TCGTCGAAGCCAATCTAAAGCTCGCCTGTTTAGTCGAGGCAGATCTGCGGGGAGCAAAGCTCGTCGGGGCAAAATTAGAA
GGGGCAGACCTGCGGAATGTGCTGCTCGAGCCAGAAAATTTAGCGTATTTACCGGGAATCGATCGTCCGGTGCTGGCTAA
TTTGACCTATCATTCACCCGATGCCCACGGGGGCTGGCAAGGGTTACCCCAGGCGGTTGGTTAG

Upstream 100 bases:

>100_bases
CCTTTTAAGAATTTTTTAAGATATAGAATAAACGTGAATTGAAATAGCAGCCCGTCACCGTGATTCTGTCCAGTCATGGC
ATGGAATTAGTGCTATTTTT

Downstream 100 bases:

>100_bases
TTGTCAGTCAGACCTCGCCCAGAGATAGGCAGGGACTGCAAGTTCTGTTATGTTTAAGGACTTAGACAGTCTGGGAGACA
GCCGAAGGGAATGGCTATTT

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MFCGSKSMNVQQLLRAYEHGERNFAGINLQGADLRGEALIGVNFQGANLMGANLSRTFLLKADLSGAALNWANLAHAKLN
DAQLVGADLTKATLDGAFMVNAQLIEARLCGASLDHTNLRGGNLRRANLCGANLARVNLCQANLNQANLAWVNAQEARLG
HADLQHANLHHGNFSRAFLRDVNLLGMDLAGLNFSGAKLYGANLRQANLQGSNLVEANLKLACLVEADLRGAKLVGAKLE
GADLRNVLLEPENLAYLPGIDRPVLANLTYHSPDAHGGWQGLPQAVG

Sequences:

>Translated_287_residues
MFCGSKSMNVQQLLRAYEHGERNFAGINLQGADLRGEALIGVNFQGANLMGANLSRTFLLKADLSGAALNWANLAHAKLN
DAQLVGADLTKATLDGAFMVNAQLIEARLCGASLDHTNLRGGNLRRANLCGANLARVNLCQANLNQANLAWVNAQEARLG
HADLQHANLHHGNFSRAFLRDVNLLGMDLAGLNFSGAKLYGANLRQANLQGSNLVEANLKLACLVEADLRGAKLVGAKLE
GADLRNVLLEPENLAYLPGIDRPVLANLTYHSPDAHGGWQGLPQAVG
>Mature_287_residues
MFCGSKSMNVQQLLRAYEHGERNFAGINLQGADLRGEALIGVNFQGANLMGANLSRTFLLKADLSGAALNWANLAHAKLN
DAQLVGADLTKATLDGAFMVNAQLIEARLCGASLDHTNLRGGNLRRANLCGANLARVNLCQANLNQANLAWVNAQEARLG
HADLQHANLHHGNFSRAFLRDVNLLGMDLAGLNFSGAKLYGANLRQANLQGSNLVEANLKLACLVEADLRGAKLVGAKLE
GADLRNVLLEPENLAYLPGIDRPVLANLTYHSPDAHGGWQGLPQAVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

Organism=Homo sapiens, GI39753959, Length=140, Percent_Identity=36.4285714285714, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI221377802, Length=196, Percent_Identity=33.1632653061224, Blast_Score=78, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 30581; Mature: 30581

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFCGSKSMNVQQLLRAYEHGERNFAGINLQGADLRGEALIGVNFQGANLMGANLSRTFLL
CCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEEECCCEEECCCCCEEEEE
KADLSGAALNWANLAHAKLNDAQLVGADLTKATLDGAFMVNAQLIEARLCGASLDHTNLR
EECCCCCEECHHHHHHCCCCCCEEECCCCHHHHCCCEEEEEHEEEEHHHCCCCCCCCCCC
GGNLRRANLCGANLARVNLCQANLNQANLAWVNAQEARLGHADLQHANLHHGNFSRAFLR
CCCEEEEECCCCCCEEEEEEECCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCCHHHHHH
DVNLLGMDLAGLNFSGAKLYGANLRQANLQGSNLVEANLKLACLVEADLRGAKLVGAKLE
CCCEEEEEEECCCCCCCEEECCCCEECCCCCCCEEECCEEEEEEEECCCCCEEEEEEECC
GADLRNVLLEPENLAYLPGIDRPVLANLTYHSPDAHGGWQGLPQAVG
CCCHHHHEECCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFCGSKSMNVQQLLRAYEHGERNFAGINLQGADLRGEALIGVNFQGANLMGANLSRTFLL
CCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEEECCCEEECCCCCEEEEE
KADLSGAALNWANLAHAKLNDAQLVGADLTKATLDGAFMVNAQLIEARLCGASLDHTNLR
EECCCCCEECHHHHHHCCCCCCEEECCCCHHHHCCCEEEEEHEEEEHHHCCCCCCCCCCC
GGNLRRANLCGANLARVNLCQANLNQANLAWVNAQEARLGHADLQHANLHHGNFSRAFLR
CCCEEEEECCCCCCEEEEEEECCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCCCHHHHHH
DVNLLGMDLAGLNFSGAKLYGANLRQANLQGSNLVEANLKLACLVEADLRGAKLVGAKLE
CCCEEEEEEECCCCCCCEEECCCCEECCCCCCCEEECCEEEEEEEECCCCCEEEEEEECC
GADLRNVLLEPENLAYLPGIDRPVLANLTYHSPDAHGGWQGLPQAVG
CCCHHHHEECCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]