| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is yqeL [H]
Identifier: 170077494
GI number: 170077494
Start: 902272
End: 902655
Strand: Direct
Name: yqeL [H]
Synonym: SYNPCC7002_A0872
Alternate gene names: 170077494
Gene position: 902272-902655 (Clockwise)
Preceding gene: 170077492
Following gene: 170077495
Centisome position: 30.0
GC content: 48.44
Gene sequence:
>384_bases ATGACTCTACCGAAAACCCTTGAAACCCATGAAAATGGACGTTTAGTCTGGGATATCGCGGCTGCAGCCGATGACCGGAA AGCCGAAGATATTGCGATTTTGAAGGTAGATCAAATTTCCTATCTGGCGGATTTTTTCGTTGTGGCGACAGGATTCTCGC GGACTCAGGTGCGGGCGATCGCCGATGCCATCGAAGAAAGATTAGAAACAAAATATGGCAAAGTGCCCCTACGGATGGAG GGCAAAAGCGAAGGGATGTGGATTCTCCAAGATTATGGCGAAGTGATTGTACACATCTTTCTGCCGCAGGAACGGGAATT TTATAATCTCGAAGCCTTCTGGGGCCATGCCGAACGCATTGAATTTGAGCCTGCTCTTCCTTAG
Upstream 100 bases:
>100_bases AGAATGCCTTTGTTTTCCCTGGGGTGCTGTGGGGGAGATTCCACGGTAAGCTAGAAGAACAACTATTTTTGCTCTATTGA TATTCACAACAGAACCGTTA
Downstream 100 bases:
>100_bases ATTTTTTGGGATGAAGCGTCAAGGGTGTCTTTTTAAAAGCCTAGACTCTTTCTCGTAATTAATTAAATCAACTCTAGTCA GGATCGCAATGGTGCGTTAG
Product: iojap-related protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MTLPKTLETHENGRLVWDIAAAADDRKAEDIAILKVDQISYLADFFVVATGFSRTQVRAIADAIEERLETKYGKVPLRME GKSEGMWILQDYGEVIVHIFLPQEREFYNLEAFWGHAERIEFEPALP
Sequences:
>Translated_127_residues MTLPKTLETHENGRLVWDIAAAADDRKAEDIAILKVDQISYLADFFVVATGFSRTQVRAIADAIEERLETKYGKVPLRME GKSEGMWILQDYGEVIVHIFLPQEREFYNLEAFWGHAERIEFEPALP >Mature_126_residues TLPKTLETHENGRLVWDIAAAADDRKAEDIAILKVDQISYLADFFVVATGFSRTQVRAIADAIEERLETKYGKVPLRMEG KSEGMWILQDYGEVIVHIFLPQEREFYNLEAFWGHAERIEFEPALP
Specific function: Unknown
COG id: COG0799
COG function: function code S; Uncharacterized homolog of plant Iojap protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Iojap family [H]
Homologues:
Organism=Escherichia coli, GI87081768, Length=91, Percent_Identity=37.3626373626374, Blast_Score=67, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004394 [H]
Pfam domain/function: PF02410 DUF143 [H]
EC number: NA
Molecular weight: Translated: 14599; Mature: 14468
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPKTLETHENGRLVWDIAAAADDRKAEDIAILKVDQISYLADFFVVATGFSRTQVRAI CCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCHHHHHHH ADAIEERLETKYGKVPLRMEGKSEGMWILQDYGEVIVHIFLPQEREFYNLEAFWGHAERI HHHHHHHHHHHCCCCCEEECCCCCCEEEEECCCEEEEEEECCCCCCEEEEHEECCCCCEE EFEPALP EECCCCC >Mature Secondary Structure TLPKTLETHENGRLVWDIAAAADDRKAEDIAILKVDQISYLADFFVVATGFSRTQVRAI CCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEHHHHHHHHHHHHHCCCCHHHHHHH ADAIEERLETKYGKVPLRMEGKSEGMWILQDYGEVIVHIFLPQEREFYNLEAFWGHAERI HHHHHHHHHHHCCCCCEEECCCCCCEEEEECCCEEEEEEECCCCCCEEEEHEECCCCCEE EFEPALP EECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]