Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170077267

Identifier: 170077267

GI number: 170077267

Start: 674799

End: 675413

Strand: Reverse

Name: 170077267

Synonym: SYNPCC7002_A0644

Alternate gene names: NA

Gene position: 675413-674799 (Counterclockwise)

Preceding gene: 170077268

Following gene: 170077265

Centisome position: 22.45

GC content: 50.08

Gene sequence:

>615_bases
ATGACACAGTTTTGGTCAGAGATTGCTCCCCAGGCCTATTTTTGGTTCAAGGCTTTCCATATTATTGGTGTGGTGGTTTG
GTTTGCGGGGTTGTTTTACCTCGTGCGCCTTTTTGTCTACCATGCCGAAGCCGAAAAGGAACCCGAACCCGCCCGGAGCA
TCCTCAAAAAACAATATGAGTTGATGGAAAAGCGCCTCTACAACATCATTACCCAACCGGGAATGTTTGTGACTGTGGCC
ATGGCGATCGCCGTGATCAGTACTGAACCGGGGGTTCTAAAAGCCTGGTGGCTCCATGCGAAATTGGCCTTGGTTGTCCT
GTTATTGGTCTACCATTTCTTCTGCGGGCGGATTATGCGTAAGCTGGCAGAAGGCACCTGCACCTGGACAGGTCAACAGT
TCCGCGCCCTCAACGAAGCGCCGACCCTCCTGTTGGTAACCATTGTGATGTTGGCCGTGTTTAAAAATAGTTTGCCCCTC
AATTGGACAGGGGGTTTAATTCTGGCGTTGATTGTTTTTATGGCCGCCGCAATCCAACTCTATGCGAAAAAACGTCGTAA
GGATCAAGAAAAACTCCGGGAAGCCCAGAGCCAAGTGGCCACCTCTAATCCTTAA

Upstream 100 bases:

>100_bases
TTTAACATTTAATGTCAACTTCGGAAAAAACTGCGGCGATCGCCCCCAGCCCCTTTTACACTGACTAAAAACGATATAAA
GATTTTTATCGAAACTTGCT

Downstream 100 bases:

>100_bases
AATCAGCCCTTGATTTTGTGCGTTTAAACCAAGTAAAAGTCCCTGGATTCTGTCAAAAATCTAGGGACTTTGCTATGTAC
ATCAAGCTTAAAACTCAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MTQFWSEIAPQAYFWFKAFHIIGVVVWFAGLFYLVRLFVYHAEAEKEPEPARSILKKQYELMEKRLYNIITQPGMFVTVA
MAIAVISTEPGVLKAWWLHAKLALVVLLLVYHFFCGRIMRKLAEGTCTWTGQQFRALNEAPTLLLVTIVMLAVFKNSLPL
NWTGGLILALIVFMAAAIQLYAKKRRKDQEKLREAQSQVATSNP

Sequences:

>Translated_204_residues
MTQFWSEIAPQAYFWFKAFHIIGVVVWFAGLFYLVRLFVYHAEAEKEPEPARSILKKQYELMEKRLYNIITQPGMFVTVA
MAIAVISTEPGVLKAWWLHAKLALVVLLLVYHFFCGRIMRKLAEGTCTWTGQQFRALNEAPTLLLVTIVMLAVFKNSLPL
NWTGGLILALIVFMAAAIQLYAKKRRKDQEKLREAQSQVATSNP
>Mature_203_residues
TQFWSEIAPQAYFWFKAFHIIGVVVWFAGLFYLVRLFVYHAEAEKEPEPARSILKKQYELMEKRLYNIITQPGMFVTVAM
AIAVISTEPGVLKAWWLHAKLALVVLLLVYHFFCGRIMRKLAEGTCTWTGQQFRALNEAPTLLLVTIVMLAVFKNSLPLN
WTGGLILALIVFMAAAIQLYAKKRRKDQEKLREAQSQVATSNP

Specific function: Unknown

COG id: COG1981

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0093 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014351
- InterPro:   IPR005265 [H]

Pfam domain/function: PF03653 UPF0093 [H]

EC number: NA

Molecular weight: Translated: 23368; Mature: 23237

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQFWSEIAPQAYFWFKAFHIIGVVVWFAGLFYLVRLFVYHAEAEKEPEPARSILKKQYE
CCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LMEKRLYNIITQPGMFVTVAMAIAVISTEPGVLKAWWLHAKLALVVLLLVYHFFCGRIMR
HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLAEGTCTWTGQQFRALNEAPTLLLVTIVMLAVFKNSLPLNWTGGLILALIVFMAAAIQL
HHHCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
YAKKRRKDQEKLREAQSQVATSNP
HHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TQFWSEIAPQAYFWFKAFHIIGVVVWFAGLFYLVRLFVYHAEAEKEPEPARSILKKQYE
CCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LMEKRLYNIITQPGMFVTVAMAIAVISTEPGVLKAWWLHAKLALVVLLLVYHFFCGRIMR
HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLAEGTCTWTGQQFRALNEAPTLLLVTIVMLAVFKNSLPLNWTGGLILALIVFMAAAIQL
HHHCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
YAKKRRKDQEKLREAQSQVATSNP
HHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]