| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077267
Identifier: 170077267
GI number: 170077267
Start: 674799
End: 675413
Strand: Reverse
Name: 170077267
Synonym: SYNPCC7002_A0644
Alternate gene names: NA
Gene position: 675413-674799 (Counterclockwise)
Preceding gene: 170077268
Following gene: 170077265
Centisome position: 22.45
GC content: 50.08
Gene sequence:
>615_bases ATGACACAGTTTTGGTCAGAGATTGCTCCCCAGGCCTATTTTTGGTTCAAGGCTTTCCATATTATTGGTGTGGTGGTTTG GTTTGCGGGGTTGTTTTACCTCGTGCGCCTTTTTGTCTACCATGCCGAAGCCGAAAAGGAACCCGAACCCGCCCGGAGCA TCCTCAAAAAACAATATGAGTTGATGGAAAAGCGCCTCTACAACATCATTACCCAACCGGGAATGTTTGTGACTGTGGCC ATGGCGATCGCCGTGATCAGTACTGAACCGGGGGTTCTAAAAGCCTGGTGGCTCCATGCGAAATTGGCCTTGGTTGTCCT GTTATTGGTCTACCATTTCTTCTGCGGGCGGATTATGCGTAAGCTGGCAGAAGGCACCTGCACCTGGACAGGTCAACAGT TCCGCGCCCTCAACGAAGCGCCGACCCTCCTGTTGGTAACCATTGTGATGTTGGCCGTGTTTAAAAATAGTTTGCCCCTC AATTGGACAGGGGGTTTAATTCTGGCGTTGATTGTTTTTATGGCCGCCGCAATCCAACTCTATGCGAAAAAACGTCGTAA GGATCAAGAAAAACTCCGGGAAGCCCAGAGCCAAGTGGCCACCTCTAATCCTTAA
Upstream 100 bases:
>100_bases TTTAACATTTAATGTCAACTTCGGAAAAAACTGCGGCGATCGCCCCCAGCCCCTTTTACACTGACTAAAAACGATATAAA GATTTTTATCGAAACTTGCT
Downstream 100 bases:
>100_bases AATCAGCCCTTGATTTTGTGCGTTTAAACCAAGTAAAAGTCCCTGGATTCTGTCAAAAATCTAGGGACTTTGCTATGTAC ATCAAGCTTAAAACTCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MTQFWSEIAPQAYFWFKAFHIIGVVVWFAGLFYLVRLFVYHAEAEKEPEPARSILKKQYELMEKRLYNIITQPGMFVTVA MAIAVISTEPGVLKAWWLHAKLALVVLLLVYHFFCGRIMRKLAEGTCTWTGQQFRALNEAPTLLLVTIVMLAVFKNSLPL NWTGGLILALIVFMAAAIQLYAKKRRKDQEKLREAQSQVATSNP
Sequences:
>Translated_204_residues MTQFWSEIAPQAYFWFKAFHIIGVVVWFAGLFYLVRLFVYHAEAEKEPEPARSILKKQYELMEKRLYNIITQPGMFVTVA MAIAVISTEPGVLKAWWLHAKLALVVLLLVYHFFCGRIMRKLAEGTCTWTGQQFRALNEAPTLLLVTIVMLAVFKNSLPL NWTGGLILALIVFMAAAIQLYAKKRRKDQEKLREAQSQVATSNP >Mature_203_residues TQFWSEIAPQAYFWFKAFHIIGVVVWFAGLFYLVRLFVYHAEAEKEPEPARSILKKQYELMEKRLYNIITQPGMFVTVAM AIAVISTEPGVLKAWWLHAKLALVVLLLVYHFFCGRIMRKLAEGTCTWTGQQFRALNEAPTLLLVTIVMLAVFKNSLPLN WTGGLILALIVFMAAAIQLYAKKRRKDQEKLREAQSQVATSNP
Specific function: Unknown
COG id: COG1981
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0093 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014351 - InterPro: IPR005265 [H]
Pfam domain/function: PF03653 UPF0093 [H]
EC number: NA
Molecular weight: Translated: 23368; Mature: 23237
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQFWSEIAPQAYFWFKAFHIIGVVVWFAGLFYLVRLFVYHAEAEKEPEPARSILKKQYE CCCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LMEKRLYNIITQPGMFVTVAMAIAVISTEPGVLKAWWLHAKLALVVLLLVYHFFCGRIMR HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLAEGTCTWTGQQFRALNEAPTLLLVTIVMLAVFKNSLPLNWTGGLILALIVFMAAAIQL HHHCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH YAKKRRKDQEKLREAQSQVATSNP HHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TQFWSEIAPQAYFWFKAFHIIGVVVWFAGLFYLVRLFVYHAEAEKEPEPARSILKKQYE CCHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LMEKRLYNIITQPGMFVTVAMAIAVISTEPGVLKAWWLHAKLALVVLLLVYHFFCGRIMR HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLAEGTCTWTGQQFRALNEAPTLLLVTIVMLAVFKNSLPLNWTGGLILALIVFMAAAIQL HHHCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH YAKKRRKDQEKLREAQSQVATSNP HHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]