| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
Click here to switch to the map view.
The map label for this gene is 170077265
Identifier: 170077265
GI number: 170077265
Start: 672720
End: 673751
Strand: Reverse
Name: 170077265
Synonym: SYNPCC7002_A0642
Alternate gene names: NA
Gene position: 673751-672720 (Counterclockwise)
Preceding gene: 170077267
Following gene: 170077264
Centisome position: 22.4
GC content: 52.71
Gene sequence:
>1032_bases ATGGCGAACCAACTACCCATTCCTGCTTTTTTTAATCCCCAGACCGTTGGTGAGATCTGGCGTGTCCCCTATCTAGACCG GGCTGCCGCGGCTGAAACCTGGGCCAAGGAACACGGGATTCAGCCGGCCACCACTGACCGCTGTCGTGTTTGCCTGCTGG TGGTCGATGTGCAGAATACCTTTTGTATCCCGGAGTTTGAGCTGTTTGTCGGCGGCCAATCGGGACTGGGGGCCGTGGAA GATAACCGACGTTTGTGTGAATTTATCTACCGAAATCTCGGAACAATTACCACCATTACCCCTACCATGGACACCCACAA GGCGGTGCAAATTTTTCACCCGGTCTTTTGGGTCAATGGAGCGGGCGAACATCCCCAACCCGCGAGCAATATCAGCTTTG CGGAGGTTGAACAGGGTCTTTGGCGCGTCAATCCGGCGATCGCCTTTAGTACGAAGCGCGACTACGAAGACTTACAACAA TATGCCCGTCACTACACCGCCCAACTCAGCCAAGCAGGGAAATATCCCCTGACGATTTGGCCCTACCACGCCATGCTCGG AGGAATTGGCCATGCCCTTGTGCCAGCGGTGGAAGAGGCTCTGTTTTTCCATAACTTAGTGCGCCATAGCCAAACCCATT TTGAAATTAAAGGAGATAATCCCCTCACGGAAAATTATTCTGCGTTGCGGCCAGAGGTCTTAGACGATGCCCAGGGACAA CCCATTGCCCAGGAAAATACCCGTTTCCTGCAAAAATTGTTGGCCTTTGATGCGCTGATTATTGCGGGGCAAGCGAAAAG CCACTGTCTAGCCTGGACGGTGGACGATTTACTCTCGGAAATTTTGCGTCACGATCCAGCCTTGGCAAAGAAAGTTTATC TTTTGGAGGACTGTACTTCTCCGGTCGTGATTCCTGGGGTAGTTGATTTTACGGCCCAGGCCGATCAAGCCTTTGATCGA TTTGCCGCAGCCGGGATGCAGCTTGTCAGTTCGACGATGGCGATCGCCGATTTTCCGGGGTTAAATCTTTAG
Upstream 100 bases:
>100_bases GATCGCCTTTCCCTCGGCTGACCCCGATTTGACAATGTGTTTTTAAAACACCACAATAAGGGTGTGGCGAAAATATCTGT TGCCAATTGAGGTGTCGATG
Downstream 100 bases:
>100_bases TTGTCTGGGGGAGGGAATTGTGTACAATCTAGCCAATGTGAAAACCTCCCCTACAATAGGAAAATAACAATACACAGACA AAAGAAGGGTCTATGGCTAC
Product: hypothetical protein
Products: nicotinate; NH3
Alternate protein names: None
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MANQLPIPAFFNPQTVGEIWRVPYLDRAAAAETWAKEHGIQPATTDRCRVCLLVVDVQNTFCIPEFELFVGGQSGLGAVE DNRRLCEFIYRNLGTITTITPTMDTHKAVQIFHPVFWVNGAGEHPQPASNISFAEVEQGLWRVNPAIAFSTKRDYEDLQQ YARHYTAQLSQAGKYPLTIWPYHAMLGGIGHALVPAVEEALFFHNLVRHSQTHFEIKGDNPLTENYSALRPEVLDDAQGQ PIAQENTRFLQKLLAFDALIIAGQAKSHCLAWTVDDLLSEILRHDPALAKKVYLLEDCTSPVVIPGVVDFTAQADQAFDR FAAAGMQLVSSTMAIADFPGLNL
Sequences:
>Translated_343_residues MANQLPIPAFFNPQTVGEIWRVPYLDRAAAAETWAKEHGIQPATTDRCRVCLLVVDVQNTFCIPEFELFVGGQSGLGAVE DNRRLCEFIYRNLGTITTITPTMDTHKAVQIFHPVFWVNGAGEHPQPASNISFAEVEQGLWRVNPAIAFSTKRDYEDLQQ YARHYTAQLSQAGKYPLTIWPYHAMLGGIGHALVPAVEEALFFHNLVRHSQTHFEIKGDNPLTENYSALRPEVLDDAQGQ PIAQENTRFLQKLLAFDALIIAGQAKSHCLAWTVDDLLSEILRHDPALAKKVYLLEDCTSPVVIPGVVDFTAQADQAFDR FAAAGMQLVSSTMAIADFPGLNL >Mature_342_residues ANQLPIPAFFNPQTVGEIWRVPYLDRAAAAETWAKEHGIQPATTDRCRVCLLVVDVQNTFCIPEFELFVGGQSGLGAVED NRRLCEFIYRNLGTITTITPTMDTHKAVQIFHPVFWVNGAGEHPQPASNISFAEVEQGLWRVNPAIAFSTKRDYEDLQQY ARHYTAQLSQAGKYPLTIWPYHAMLGGIGHALVPAVEEALFFHNLVRHSQTHFEIKGDNPLTENYSALRPEVLDDAQGQP IAQENTRFLQKLLAFDALIIAGQAKSHCLAWTVDDLLSEILRHDPALAKKVYLLEDCTSPVVIPGVVDFTAQADQAFDRF AAAGMQLVSSTMAIADFPGLNL
Specific function: Unknown
COG id: COG1335
COG function: function code Q; Amidases related to nicotinamidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.5.1.19
Molecular weight: Translated: 38087; Mature: 37955
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANQLPIPAFFNPQTVGEIWRVPYLDRAAAAETWAKEHGIQPATTDRCRVCLLVVDVQNT CCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCC FCIPEFELFVGGQSGLGAVEDNRRLCEFIYRNLGTITTITPTMDTHKAVQIFHPVFWVNG CCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHEEEECC AGEHPQPASNISFAEVEQGLWRVNPAIAFSTKRDYEDLQQYARHYTAQLSQAGKYPLTIW CCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEE PYHAMLGGIGHALVPAVEEALFFHNLVRHSQTHFEIKGDNPLTENYSALRPEVLDDAQGQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHCCHHHCCCCCC PIAQENTRFLQKLLAFDALIIAGQAKSHCLAWTVDDLLSEILRHDPALAKKVYLLEDCTS CCHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHCCC PVVIPGVVDFTAQADQAFDRFAAAGMQLVSSTMAIADFPGLNL CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure ANQLPIPAFFNPQTVGEIWRVPYLDRAAAAETWAKEHGIQPATTDRCRVCLLVVDVQNT CCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCC FCIPEFELFVGGQSGLGAVEDNRRLCEFIYRNLGTITTITPTMDTHKAVQIFHPVFWVNG CCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHEEEECC AGEHPQPASNISFAEVEQGLWRVNPAIAFSTKRDYEDLQQYARHYTAQLSQAGKYPLTIW CCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEE PYHAMLGGIGHALVPAVEEALFFHNLVRHSQTHFEIKGDNPLTENYSALRPEVLDDAQGQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHCCHHHCCCCCC PIAQENTRFLQKLLAFDALIIAGQAKSHCLAWTVDDLLSEILRHDPALAKKVYLLEDCTS CCHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHCCC PVVIPGVVDFTAQADQAFDRFAAAGMQLVSSTMAIADFPGLNL CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: nicotinamide; H2O
Specific reaction: nicotinamide + H2O = nicotinate + NH3
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA