| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is hisZ
Identifier: 170077245
GI number: 170077245
Start: 651313
End: 652527
Strand: Reverse
Name: hisZ
Synonym: SYNPCC7002_A0621
Alternate gene names: 170077245
Gene position: 652527-651313 (Counterclockwise)
Preceding gene: 170077246
Following gene: 170077244
Centisome position: 21.69
GC content: 52.02
Gene sequence:
>1215_bases ATGATTCATCAACCCCCCGCAGGTGCCAGGGATTTATTACCCCTCGAAGTTGCTCAAAAGGCCTGGATTAATGACAATCT CCAACGGGTTTTTCAACAGTGGGGCTACCAGCGGATCGTCACCTCTACTTTGGAATGGTTGGAGACGCTCACGGCTGGCG GGGCGGTGGATCGCACAAAGGTCATTCAACTACAAACGGCAGAAAGTCAAGCTTTGGGTTTGCGTCCAGAGTTAACGGCC TCGATCGCCAGGGCGGCTGTCACCAGAATGGCCGAAAATACCTTTCCCCAACGGCTTTGTTACCGGGCCAATGTGTTTCG TCATCCCCCCCGGGGCAGCCACGGCAAACAAATGGAGTTTTACCAAGCGGGGGTAGAGTTACTCTTTGCGGCAGGAATTG TGGCGGATGCAGAAATTTTATTGCTTCTAGCAGATTCCCTCGATGCCCTGGGTTTAGAAGATTGGCAGTTAATTTTAGGA GAGGCGGCCCTGGGGCGATCGCTCTTGGATCCGTTTCCTGAACCAGTAAGGGAAACAGTTCGTCATTGTGTGGCCAATTT AGACCGGGTTGGGTTGCAGGAATTGCCCCTGGATGAGGATCTCAAGGCCTATGCCCTGGACATTTTTGATCTGCGTGGCG AGCCGGAAACCATATTGGCGCGGGTGAGTCAGTTTGATCTGGGGCCAGAGGCGCAGGAAATCGTCGCGAATCTTAAGGCT CTCTTTGCGTTATTGGCTGGGAGTACCCAGAAGCAACTGCCAATTATCTTGGATTTAACCCTAATTCAGACCTTTGATTA CTACACGGGCATTGTGTTTGAGGTGGTTAATTTTGCCAATCATCAGTCTTATATCTTGGGTCAAGGTGGCCGCTATGATC AGCTGCTGGGTCTGTATCATCCCCAACGGGAAAATCACCCCGGTATTGGCTTTTGCTTGAATATTGAAGAACTACACACC TGTCTGTTGACAAGTCCCCAATTGCCCAAACAACTCGCTGGTAGTGCTTGGCTGGTGATTGCAACGGAACCCAATGCCCA GCAGCAGGTATTTCACTATGCCCAAACCCTGCGTCAAGGGGATGAAATGGTGCGCGTCGAAGTGGAACTGGGAGGGCGAT CGCCTGCCGAAATTTATGCCTATGCCCGCAGCAGCCACATTACCCACCTCGCCTGGATTGACCCCAGTGGCGAACCCAAA CTCGAAACCCTCTAA
Upstream 100 bases:
>100_bases AAGAAAGGGAGCGCCGATAAACAAGGGGGTTTATTTGGCGGTTTGTTTGGCGGGAAAAAGAAGTAGAATAGGCGACGGCA AAGCTCAACATACGGATTTC
Downstream 100 bases:
>100_bases CTTAAATTCTGTTTCCTTAAGATTTTTGAATCACTGCTAACGAAAAAATGCTTACCATTGCCATTCCCAAAGGTGGCCTC CTCCCAGAGGCGATCGCCCT
Product: ATP phosphoribosyltransferase regulatory subunit
Products: AMP; diphosphate +L-histidyl-tRNAHis [C]
Alternate protein names: NA
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MIHQPPAGARDLLPLEVAQKAWINDNLQRVFQQWGYQRIVTSTLEWLETLTAGGAVDRTKVIQLQTAESQALGLRPELTA SIARAAVTRMAENTFPQRLCYRANVFRHPPRGSHGKQMEFYQAGVELLFAAGIVADAEILLLLADSLDALGLEDWQLILG EAALGRSLLDPFPEPVRETVRHCVANLDRVGLQELPLDEDLKAYALDIFDLRGEPETILARVSQFDLGPEAQEIVANLKA LFALLAGSTQKQLPIILDLTLIQTFDYYTGIVFEVVNFANHQSYILGQGGRYDQLLGLYHPQRENHPGIGFCLNIEELHT CLLTSPQLPKQLAGSAWLVIATEPNAQQQVFHYAQTLRQGDEMVRVEVELGGRSPAEIYAYARSSHITHLAWIDPSGEPK LETL
Sequences:
>Translated_404_residues MIHQPPAGARDLLPLEVAQKAWINDNLQRVFQQWGYQRIVTSTLEWLETLTAGGAVDRTKVIQLQTAESQALGLRPELTA SIARAAVTRMAENTFPQRLCYRANVFRHPPRGSHGKQMEFYQAGVELLFAAGIVADAEILLLLADSLDALGLEDWQLILG EAALGRSLLDPFPEPVRETVRHCVANLDRVGLQELPLDEDLKAYALDIFDLRGEPETILARVSQFDLGPEAQEIVANLKA LFALLAGSTQKQLPIILDLTLIQTFDYYTGIVFEVVNFANHQSYILGQGGRYDQLLGLYHPQRENHPGIGFCLNIEELHT CLLTSPQLPKQLAGSAWLVIATEPNAQQQVFHYAQTLRQGDEMVRVEVELGGRSPAEIYAYARSSHITHLAWIDPSGEPK LETL >Mature_404_residues MIHQPPAGARDLLPLEVAQKAWINDNLQRVFQQWGYQRIVTSTLEWLETLTAGGAVDRTKVIQLQTAESQALGLRPELTA SIARAAVTRMAENTFPQRLCYRANVFRHPPRGSHGKQMEFYQAGVELLFAAGIVADAEILLLLADSLDALGLEDWQLILG EAALGRSLLDPFPEPVRETVRHCVANLDRVGLQELPLDEDLKAYALDIFDLRGEPETILARVSQFDLGPEAQEIVANLKA LFALLAGSTQKQLPIILDLTLIQTFDYYTGIVFEVVNFANHQSYILGQGGRYDQLLGLYHPQRENHPGIGFCLNIEELHT CLLTSPQLPKQLAGSAWLVIATEPNAQQQVFHYAQTLRQGDEMVRVEVELGGRSPAEIYAYARSSHITHLAWIDPSGEPK LETL
Specific function: Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
COG id: COG3705
COG function: function code E; ATP phosphoribosyltransferase involved in histidine biosynthesis
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family. HisZ subfamily
Homologues:
Organism=Homo sapiens, GI6996014, Length=352, Percent_Identity=26.4204545454545, Blast_Score=90, Evalue=4e-18, Organism=Homo sapiens, GI15029520, Length=346, Percent_Identity=25.7225433526012, Blast_Score=83, Evalue=5e-16, Organism=Drosophila melanogaster, GI24643061, Length=364, Percent_Identity=25, Blast_Score=84, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HISZ_SYNP2 (B1XPZ9)
Other databases:
- EMBL: CP000951 - RefSeq: YP_001733883.1 - ProteinModelPortal: B1XPZ9 - SMR: B1XPZ9 - GeneID: 6057357 - GenomeReviews: CP000951_GR - KEGG: syp:SYNPCC7002_A0621 - HOGENOM: HBG616575 - OMA: YREHVKS - ProtClustDB: PRK12292 - GO: GO:0005737 - HAMAP: MF_00125 - InterPro: IPR002314 - InterPro: IPR004517 - InterPro: IPR004516 - PANTHER: PTHR11476 - PIRSF: PIRSF001549 - TIGRFAMs: TIGR00443
Pfam domain/function: PF00587 tRNA-synt_2b
EC number: 6.1.1.21 [C]
Molecular weight: Translated: 44972; Mature: 44972
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHQPPAGARDLLPLEVAQKAWINDNLQRVFQQWGYQRIVTSTLEWLETLTAGGAVDRTK CCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCEE VIQLQTAESQALGLRPELTASIARAAVTRMAENTFPQRLCYRANVFRHPPRGSHGKQMEF EEEEEECCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH YQAGVELLFAAGIVADAEILLLLADSLDALGLEDWQLILGEAALGRSLLDPFPEPVRETV HHHHHHHHHHHHHHHHHHEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH RHCVANLDRVGLQELPLDEDLKAYALDIFDLRGEPETILARVSQFDLGPEAQEIVANLKA HHHHHHHHHCCHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHH LFALLAGSTQKQLPIILDLTLIQTFDYYTGIVFEVVNFANHQSYILGQGGRYDQLLGLYH HHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHCCC PQRENHPGIGFCLNIEELHTCLLTSPQLPKQLAGSAWLVIATEPNAQQQVFHYAQTLRQG CCCCCCCCCEEEEEHHHHHHHHHCCCCCHHHHCCCEEEEEEECCCHHHHHHHHHHHHHCC DEMVRVEVELGGRSPAEIYAYARSSHITHLAWIDPSGEPKLETL CCEEEEEEEECCCCHHHHHEEHHCCCCEEEEEECCCCCCCCCCC >Mature Secondary Structure MIHQPPAGARDLLPLEVAQKAWINDNLQRVFQQWGYQRIVTSTLEWLETLTAGGAVDRTK CCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCEE VIQLQTAESQALGLRPELTASIARAAVTRMAENTFPQRLCYRANVFRHPPRGSHGKQMEF EEEEEECCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH YQAGVELLFAAGIVADAEILLLLADSLDALGLEDWQLILGEAALGRSLLDPFPEPVRETV HHHHHHHHHHHHHHHHHHEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHH RHCVANLDRVGLQELPLDEDLKAYALDIFDLRGEPETILARVSQFDLGPEAQEIVANLKA HHHHHHHHHCCHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHH LFALLAGSTQKQLPIILDLTLIQTFDYYTGIVFEVVNFANHQSYILGQGGRYDQLLGLYH HHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHCCC PQRENHPGIGFCLNIEELHTCLLTSPQLPKQLAGSAWLVIATEPNAQQQVFHYAQTLRQG CCCCCCCCCEEEEEHHHHHHHHHCCCCCHHHHCCCEEEEEEECCCHHHHHHHHHHHHHCC DEMVRVEVELGGRSPAEIYAYARSSHITHLAWIDPSGEPKLETL CCEEEEEEEECCCCHHHHHEEHHCCCCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Mg2+ [C]
Kcat value (1/min): 8520 [C]
Specific activity: 121.8
Km value (mM): 0.06 {His}} 0.046 {His}} 0.03 {His}} 0.02 {His}} 0.017 {His}} 0.011 {His}} 0.008 {His}} 0.0014 {tRNAHis}} 0.00056 {tRNAHis}} 0.0016 {U73tRNAHisGUG}} 0.00031 {U73tRNAHisGUG}} 0.89 {ATP}} 0.74 {ATP}} 0.655 {ATP}} 0.5
Substrates: ATP; @HIST01.txt*L-histidine!; tRNAHis [C]
Specific reaction: ATP + @HIST01.txt*L-histidine! + tRNAHis = AMP + diphosphate +L-histidyl-tRNAHis [C]
General reaction: Aminoacylation; Esterification [C]
Inhibitor: 1, 2, 4-Triazole-3-alanine; D-Histidine; Diphosphate; L-Histidinol; Mg2+; N-Acetyl histidine; NEM; p-Chloromercuribenzoate [C]
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA