| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077246
Identifier: 170077246
GI number: 170077246
Start: 652562
End: 653491
Strand: Reverse
Name: 170077246
Synonym: SYNPCC7002_A0622
Alternate gene names: NA
Gene position: 653491-652562 (Counterclockwise)
Preceding gene: 170077247
Following gene: 170077245
Centisome position: 21.72
GC content: 51.83
Gene sequence:
>930_bases ATGTCGCTTGCCATTAACCAAGGATTATTTGCTCGAAAAATTGCCGACCATTTTGCGGTGCTCGGCTTGCCCATTGATGC GAATCCAAAAGTCGTGCGCAAAGCCTATTTACAAATTGCCCAACGGCTCCACCCGGATACCTGTACCCTAACCCAGGCTC TGGATAAACGCTTGGCCAGTGAATTTTTGTCAAAGCTCGTGAATCCGGCCTATGAAAAACTGTCTAAACCGGCTTCCTGG TCGGAATACCAAGTGATTCTGGTGCAATTGAGTCAGCAATTGAGTAATGAGACAGATAACCTTGTCCTCACCACGACGGA AGCCCAGGAACTCCTCGATACCCCAGGGAATATTTCGGCGCTCTACCGGGAGAAGGTGGCCGCTTTGGCCCAGGCAAATT ACCAAACGATGGCTACAGTCCCCCAGGCGATCGCCACCTTAAGCGAACTGAACCTCGTCTATCTCCAATACCTCGGCAAG GTTAAAAAAGTCGAGACAAAAGAAACCATGCCCCAATATCCTGGGGAAACCATGGCGACATCAGGCGCTACCGTCAGCCC GCCGCCGAAAAATACCAGCACATCTTCCCTAGACGCAGCCCTCTGGCGGGGGGAAGAACACCTAAAAAAGAAAAACTATG CCAAGGCCGTACTGGAATTCCGAGATGCCCTCCAGCTCGATCCCAACTGCATTAAGGCCCACGCCCTCATGGGACTGTCC TATCTCAGCCAAAACCAACTGGCAATGGCCAAGGTGCATATCAAAAAAGCTTACCTCTCCAAACCAACAGATCCCCTCGT GCGCCAAGCCAAACAAGCCCTCGAAAAAGTGATGGGCAGCGCCCTAGAGACCCAACCAGGGGCCAAGAAAGGGAGCGCCG ATAAACAAGGGGGTTTATTTGGCGGTTTGTTTGGCGGGAAAAAGAAGTAG
Upstream 100 bases:
>100_bases TTCAGAGTTATTACGCTGCGGATTCATAAAAACCATCATTAAACGGTTGTACCTTTTTTAGAATCAGTCATAATTAGGTC AATGGGACCCCCACAAACAT
Downstream 100 bases:
>100_bases AATAGGCGACGGCAAAGCTCAACATACGGATTTCATGATTCATCAACCCCCCGCAGGTGCCAGGGATTTATTACCCCTCG AAGTTGCTCAAAAGGCCTGG
Product: DnaJ-like protein
Products: NA
Alternate protein names: Heat Shock Protein DNAJ-Like; Heat Shock Protein DNAJ Domain Protein; DNAJ Domain-Containing Protein; DNAJ-Like Protein; Tetratricopeptide Repeat Domain Protein
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MSLAINQGLFARKIADHFAVLGLPIDANPKVVRKAYLQIAQRLHPDTCTLTQALDKRLASEFLSKLVNPAYEKLSKPASW SEYQVILVQLSQQLSNETDNLVLTTTEAQELLDTPGNISALYREKVAALAQANYQTMATVPQAIATLSELNLVYLQYLGK VKKVETKETMPQYPGETMATSGATVSPPPKNTSTSSLDAALWRGEEHLKKKNYAKAVLEFRDALQLDPNCIKAHALMGLS YLSQNQLAMAKVHIKKAYLSKPTDPLVRQAKQALEKVMGSALETQPGAKKGSADKQGGLFGGLFGGKKK
Sequences:
>Translated_309_residues MSLAINQGLFARKIADHFAVLGLPIDANPKVVRKAYLQIAQRLHPDTCTLTQALDKRLASEFLSKLVNPAYEKLSKPASW SEYQVILVQLSQQLSNETDNLVLTTTEAQELLDTPGNISALYREKVAALAQANYQTMATVPQAIATLSELNLVYLQYLGK VKKVETKETMPQYPGETMATSGATVSPPPKNTSTSSLDAALWRGEEHLKKKNYAKAVLEFRDALQLDPNCIKAHALMGLS YLSQNQLAMAKVHIKKAYLSKPTDPLVRQAKQALEKVMGSALETQPGAKKGSADKQGGLFGGLFGGKKK >Mature_308_residues SLAINQGLFARKIADHFAVLGLPIDANPKVVRKAYLQIAQRLHPDTCTLTQALDKRLASEFLSKLVNPAYEKLSKPASWS EYQVILVQLSQQLSNETDNLVLTTTEAQELLDTPGNISALYREKVAALAQANYQTMATVPQAIATLSELNLVYLQYLGKV KKVETKETMPQYPGETMATSGATVSPPPKNTSTSSLDAALWRGEEHLKKKNYAKAVLEFRDALQLDPNCIKAHALMGLSY LSQNQLAMAKVHIKKAYLSKPTDPLVRQAKQALEKVMGSALETQPGAKKGSADKQGGLFGGLFGGKKK
Specific function: Unknown
COG id: COG2214
COG function: function code O; DnaJ-class molecular chaperone
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33739; Mature: 33608
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION ; PS50076 DNAJ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLAINQGLFARKIADHFAVLGLPIDANPKVVRKAYLQIAQRLHPDTCTLTQALDKRLAS CCCCCCCCHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH EFLSKLVNPAYEKLSKPASWSEYQVILVQLSQQLSNETDNLVLTTTEAQELLDTPGNISA HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHCCCCCHHH LYREKVAALAQANYQTMATVPQAIATLSELNLVYLQYLGKVKKVETKETMPQYPGETMAT HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC SGATVSPPPKNTSTSSLDAALWRGEEHLKKKNYAKAVLEFRDALQLDPNCIKAHALMGLS CCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH YLSQNQLAMAKVHIKKAYLSKPTDPLVRQAKQALEKVMGSALETQPGAKKGSADKQGGLF HHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE GGLFGGKKK ECCCCCCCC >Mature Secondary Structure SLAINQGLFARKIADHFAVLGLPIDANPKVVRKAYLQIAQRLHPDTCTLTQALDKRLAS CCCCCCCHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH EFLSKLVNPAYEKLSKPASWSEYQVILVQLSQQLSNETDNLVLTTTEAQELLDTPGNISA HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHCCCCCHHH LYREKVAALAQANYQTMATVPQAIATLSELNLVYLQYLGKVKKVETKETMPQYPGETMAT HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC SGATVSPPPKNTSTSSLDAALWRGEEHLKKKNYAKAVLEFRDALQLDPNCIKAHALMGLS CCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH YLSQNQLAMAKVHIKKAYLSKPTDPLVRQAKQALEKVMGSALETQPGAKKGSADKQGGLF HHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE GGLFGGKKK ECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA