Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170077246

Identifier: 170077246

GI number: 170077246

Start: 652562

End: 653491

Strand: Reverse

Name: 170077246

Synonym: SYNPCC7002_A0622

Alternate gene names: NA

Gene position: 653491-652562 (Counterclockwise)

Preceding gene: 170077247

Following gene: 170077245

Centisome position: 21.72

GC content: 51.83

Gene sequence:

>930_bases
ATGTCGCTTGCCATTAACCAAGGATTATTTGCTCGAAAAATTGCCGACCATTTTGCGGTGCTCGGCTTGCCCATTGATGC
GAATCCAAAAGTCGTGCGCAAAGCCTATTTACAAATTGCCCAACGGCTCCACCCGGATACCTGTACCCTAACCCAGGCTC
TGGATAAACGCTTGGCCAGTGAATTTTTGTCAAAGCTCGTGAATCCGGCCTATGAAAAACTGTCTAAACCGGCTTCCTGG
TCGGAATACCAAGTGATTCTGGTGCAATTGAGTCAGCAATTGAGTAATGAGACAGATAACCTTGTCCTCACCACGACGGA
AGCCCAGGAACTCCTCGATACCCCAGGGAATATTTCGGCGCTCTACCGGGAGAAGGTGGCCGCTTTGGCCCAGGCAAATT
ACCAAACGATGGCTACAGTCCCCCAGGCGATCGCCACCTTAAGCGAACTGAACCTCGTCTATCTCCAATACCTCGGCAAG
GTTAAAAAAGTCGAGACAAAAGAAACCATGCCCCAATATCCTGGGGAAACCATGGCGACATCAGGCGCTACCGTCAGCCC
GCCGCCGAAAAATACCAGCACATCTTCCCTAGACGCAGCCCTCTGGCGGGGGGAAGAACACCTAAAAAAGAAAAACTATG
CCAAGGCCGTACTGGAATTCCGAGATGCCCTCCAGCTCGATCCCAACTGCATTAAGGCCCACGCCCTCATGGGACTGTCC
TATCTCAGCCAAAACCAACTGGCAATGGCCAAGGTGCATATCAAAAAAGCTTACCTCTCCAAACCAACAGATCCCCTCGT
GCGCCAAGCCAAACAAGCCCTCGAAAAAGTGATGGGCAGCGCCCTAGAGACCCAACCAGGGGCCAAGAAAGGGAGCGCCG
ATAAACAAGGGGGTTTATTTGGCGGTTTGTTTGGCGGGAAAAAGAAGTAG

Upstream 100 bases:

>100_bases
TTCAGAGTTATTACGCTGCGGATTCATAAAAACCATCATTAAACGGTTGTACCTTTTTTAGAATCAGTCATAATTAGGTC
AATGGGACCCCCACAAACAT

Downstream 100 bases:

>100_bases
AATAGGCGACGGCAAAGCTCAACATACGGATTTCATGATTCATCAACCCCCCGCAGGTGCCAGGGATTTATTACCCCTCG
AAGTTGCTCAAAAGGCCTGG

Product: DnaJ-like protein

Products: NA

Alternate protein names: Heat Shock Protein DNAJ-Like; Heat Shock Protein DNAJ Domain Protein; DNAJ Domain-Containing Protein; DNAJ-Like Protein; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MSLAINQGLFARKIADHFAVLGLPIDANPKVVRKAYLQIAQRLHPDTCTLTQALDKRLASEFLSKLVNPAYEKLSKPASW
SEYQVILVQLSQQLSNETDNLVLTTTEAQELLDTPGNISALYREKVAALAQANYQTMATVPQAIATLSELNLVYLQYLGK
VKKVETKETMPQYPGETMATSGATVSPPPKNTSTSSLDAALWRGEEHLKKKNYAKAVLEFRDALQLDPNCIKAHALMGLS
YLSQNQLAMAKVHIKKAYLSKPTDPLVRQAKQALEKVMGSALETQPGAKKGSADKQGGLFGGLFGGKKK

Sequences:

>Translated_309_residues
MSLAINQGLFARKIADHFAVLGLPIDANPKVVRKAYLQIAQRLHPDTCTLTQALDKRLASEFLSKLVNPAYEKLSKPASW
SEYQVILVQLSQQLSNETDNLVLTTTEAQELLDTPGNISALYREKVAALAQANYQTMATVPQAIATLSELNLVYLQYLGK
VKKVETKETMPQYPGETMATSGATVSPPPKNTSTSSLDAALWRGEEHLKKKNYAKAVLEFRDALQLDPNCIKAHALMGLS
YLSQNQLAMAKVHIKKAYLSKPTDPLVRQAKQALEKVMGSALETQPGAKKGSADKQGGLFGGLFGGKKK
>Mature_308_residues
SLAINQGLFARKIADHFAVLGLPIDANPKVVRKAYLQIAQRLHPDTCTLTQALDKRLASEFLSKLVNPAYEKLSKPASWS
EYQVILVQLSQQLSNETDNLVLTTTEAQELLDTPGNISALYREKVAALAQANYQTMATVPQAIATLSELNLVYLQYLGKV
KKVETKETMPQYPGETMATSGATVSPPPKNTSTSSLDAALWRGEEHLKKKNYAKAVLEFRDALQLDPNCIKAHALMGLSY
LSQNQLAMAKVHIKKAYLSKPTDPLVRQAKQALEKVMGSALETQPGAKKGSADKQGGLFGGLFGGKKK

Specific function: Unknown

COG id: COG2214

COG function: function code O; DnaJ-class molecular chaperone

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33739; Mature: 33608

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION ; PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLAINQGLFARKIADHFAVLGLPIDANPKVVRKAYLQIAQRLHPDTCTLTQALDKRLAS
CCCCCCCCHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
EFLSKLVNPAYEKLSKPASWSEYQVILVQLSQQLSNETDNLVLTTTEAQELLDTPGNISA
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHCCCCCHHH
LYREKVAALAQANYQTMATVPQAIATLSELNLVYLQYLGKVKKVETKETMPQYPGETMAT
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
SGATVSPPPKNTSTSSLDAALWRGEEHLKKKNYAKAVLEFRDALQLDPNCIKAHALMGLS
CCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
YLSQNQLAMAKVHIKKAYLSKPTDPLVRQAKQALEKVMGSALETQPGAKKGSADKQGGLF
HHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE
GGLFGGKKK
ECCCCCCCC
>Mature Secondary Structure 
SLAINQGLFARKIADHFAVLGLPIDANPKVVRKAYLQIAQRLHPDTCTLTQALDKRLAS
CCCCCCCHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH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ECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA