| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077206
Identifier: 170077206
GI number: 170077206
Start: 607348
End: 608541
Strand: Direct
Name: 170077206
Synonym: SYNPCC7002_A0581
Alternate gene names: NA
Gene position: 607348-608541 (Clockwise)
Preceding gene: 170077205
Following gene: 170077208
Centisome position: 20.19
GC content: 52.85
Gene sequence:
>1194_bases ATGAGAACGATCGCCAGCATCAACGAAAAGATTCTCGCCCACCAGGCCGTTGTCTGGACGGTGTCTGAAGTAAAAGCACG GGTGGCGGAATGGGGCATCAAAAAAATTGCTGAAACCGTTGATGTGGTGACCACAGGTACCTTTGAGCCGATGGAATCTT CGGGGGCAATGCTCAACCTGGGCCATACGGATCCCCCCATTAAAATTCGCAAATGTTGGCTTAATGGGGTGCCCGCTTAT CCTGGCCTGGGGGCGGTGGATATTTACCTAGGGGCGACCATGATGGAAGACCCCCTGGAAAATGAAGCGGCGGAAATTGG CGATCGCCCCCTCTCCCAGAAAGGCGGCGGCCATGTCATTGAAGATCTGATCGCAGGTAAAACCGTCCATCTCCATGCCC TAGGCCATGTGACCGATTGTTATCCGCGCGCTACCTGGGACAATACCCTCACGAAAGATCAAATTAATCAGTTTTATCTG TTCAATCCCCGCAATCTTTATCAAAATTTTATTGTGGGCGTTAACGGTGGCGATCGCCCCCTCTATACTTACCTCGGCCC CCTCCAGCCCCATTTGGGAAATGCCGTCTATGCCTGTGCTGGAGCAATTTCTCCTTTGTTAAATGACCCAGATTTAGAGT TGATCGGGGTCGGCAGCAAAATTTTCTTGGGGGGCGGTATTGGTTACGTGGCCTGGGAAGGCACCCAGCATTTTCCCCTC CAGAAACGTCTGGGCAATCGCACACCCCTGGGGCCAGCCTCCACTTTGGCCTTGATCGGCGACGCAAAACAAATGGACCC CAAGTGGGTACGGGGTTGTTATTTCACCAAGTACGGCCCTTCTTTAATGTTGGGTGTGGGGGTGCCCCTGCCAGTTCTCC ATGAGGAAGTCATCGCCCACTGTGCTGTCCAAGATAAAGAAATTGTCGCCCCGGTGATGGATTTTTCGATTCCGCGCCGG GTGCGGCCCACCTTTGGTTTGGTGAGCTATGGCCAGCTCAAAACCGGGAAATTAACCATTGAGGGAAAAACCGTAAAAGT TGCTCCGGTCACAAGTCTATATCTCGCGGATCAAGTGGCAGAAACCCTCAAACAATGGATTCAAGCCGGAGATTTTACCC TCACCGAACCCGTGGCGACCATCAGTGGCGATCGCCCCTTTTTGTCCCAAGACCAATGGAGCCAGCGTTTGTAA
Upstream 100 bases:
>100_bases CTGGGATGACGTGAAATATTGTTCGGAGCGGTGCCGGCGGCGGCGTAACCAAGGGTAATTTTCTCCTAGGATGAAAGGGT ACGCTTCCCTCTGTTCAACC
Downstream 100 bases:
>100_bases TACCGACGAAAAAAGCCACCATCCTGAAACGGCGGTGACCATCGATCATTTTTTAGAAAACAGAATTTTCCCAGTAAATT TCGTTAGCTCATGGTGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MRTIASINEKILAHQAVVWTVSEVKARVAEWGIKKIAETVDVVTTGTFEPMESSGAMLNLGHTDPPIKIRKCWLNGVPAY PGLGAVDIYLGATMMEDPLENEAAEIGDRPLSQKGGGHVIEDLIAGKTVHLHALGHVTDCYPRATWDNTLTKDQINQFYL FNPRNLYQNFIVGVNGGDRPLYTYLGPLQPHLGNAVYACAGAISPLLNDPDLELIGVGSKIFLGGGIGYVAWEGTQHFPL QKRLGNRTPLGPASTLALIGDAKQMDPKWVRGCYFTKYGPSLMLGVGVPLPVLHEEVIAHCAVQDKEIVAPVMDFSIPRR VRPTFGLVSYGQLKTGKLTIEGKTVKVAPVTSLYLADQVAETLKQWIQAGDFTLTEPVATISGDRPFLSQDQWSQRL
Sequences:
>Translated_397_residues MRTIASINEKILAHQAVVWTVSEVKARVAEWGIKKIAETVDVVTTGTFEPMESSGAMLNLGHTDPPIKIRKCWLNGVPAY PGLGAVDIYLGATMMEDPLENEAAEIGDRPLSQKGGGHVIEDLIAGKTVHLHALGHVTDCYPRATWDNTLTKDQINQFYL FNPRNLYQNFIVGVNGGDRPLYTYLGPLQPHLGNAVYACAGAISPLLNDPDLELIGVGSKIFLGGGIGYVAWEGTQHFPL QKRLGNRTPLGPASTLALIGDAKQMDPKWVRGCYFTKYGPSLMLGVGVPLPVLHEEVIAHCAVQDKEIVAPVMDFSIPRR VRPTFGLVSYGQLKTGKLTIEGKTVKVAPVTSLYLADQVAETLKQWIQAGDFTLTEPVATISGDRPFLSQDQWSQRL >Mature_397_residues MRTIASINEKILAHQAVVWTVSEVKARVAEWGIKKIAETVDVVTTGTFEPMESSGAMLNLGHTDPPIKIRKCWLNGVPAY PGLGAVDIYLGATMMEDPLENEAAEIGDRPLSQKGGGHVIEDLIAGKTVHLHALGHVTDCYPRATWDNTLTKDQINQFYL FNPRNLYQNFIVGVNGGDRPLYTYLGPLQPHLGNAVYACAGAISPLLNDPDLELIGVGSKIFLGGGIGYVAWEGTQHFPL QKRLGNRTPLGPASTLALIGDAKQMDPKWVRGCYFTKYGPSLMLGVGVPLPVLHEEVIAHCAVQDKEIVAPVMDFSIPRR VRPTFGLVSYGQLKTGKLTIEGKTVKVAPVTSLYLADQVAETLKQWIQAGDFTLTEPVATISGDRPFLSQDQWSQRL
Specific function: Unknown
COG id: COG1900
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR002708 - InterPro: IPR016426 - ProDom: PD011569 [H]
Pfam domain/function: PF00571 CBS; PF01837 DUF39 [H]
EC number: NA
Molecular weight: Translated: 43278; Mature: 43278
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTIASINEKILAHQAVVWTVSEVKARVAEWGIKKIAETVDVVTTGTFEPMESSGAMLNL CCCHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEEC GHTDPPIKIRKCWLNGVPAYPGLGAVDIYLGATMMEDPLENEAAEIGDRPLSQKGGGHVI CCCCCCCEEEEEECCCCCCCCCCCEEHHHHCCHHHCCCHHHHHHHHCCCCCCCCCCCHHH EDLIAGKTVHLHALGHVTDCYPRATWDNTLTKDQINQFYLFNPRNLYQNFIVGVNGGDRP HHHHCCCEEEEEEECCHHHCCCCCCCCCCCCHHHCCEEEEECHHHHHCCEEEECCCCCCC LYTYLGPLQPHLGNAVYACAGAISPLLNDPDLELIGVGSKIFLGGGIGYVAWEGTQHFPL EEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCEEEEEECCCCCCCH QKRLGNRTPLGPASTLALIGDAKQMDPKWVRGCYFTKYGPSLMLGVGVPLPVLHEEVIAH HHHCCCCCCCCCHHHEEEECCCHHCCHHHHHCEEEEECCCCEEEECCCCCHHHHHHHHHH CAVQDKEIVAPVMDFSIPRRVRPTFGLVSYGQLKTGKLTIEGKTVKVAPVTSLYLADQVA HHCCCCHHHHHHHHCCCCCCCCCCCCCEECCCEECCEEEEECCEEEEECHHHHHHHHHHH ETLKQWIQAGDFTLTEPVATISGDRPFLSQDQWSQRL HHHHHHHHCCCCEEECCHHCCCCCCCCCCCCHHHHCC >Mature Secondary Structure MRTIASINEKILAHQAVVWTVSEVKARVAEWGIKKIAETVDVVTTGTFEPMESSGAMLNL CCCHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEEC GHTDPPIKIRKCWLNGVPAYPGLGAVDIYLGATMMEDPLENEAAEIGDRPLSQKGGGHVI CCCCCCCEEEEEECCCCCCCCCCCEEHHHHCCHHHCCCHHHHHHHHCCCCCCCCCCCHHH EDLIAGKTVHLHALGHVTDCYPRATWDNTLTKDQINQFYLFNPRNLYQNFIVGVNGGDRP HHHHCCCEEEEEEECCHHHCCCCCCCCCCCCHHHCCEEEEECHHHHHCCEEEECCCCCCC LYTYLGPLQPHLGNAVYACAGAISPLLNDPDLELIGVGSKIFLGGGIGYVAWEGTQHFPL EEEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCEEEEEECCCCCCCH QKRLGNRTPLGPASTLALIGDAKQMDPKWVRGCYFTKYGPSLMLGVGVPLPVLHEEVIAH HHHCCCCCCCCCHHHEEEECCCHHCCHHHHHCEEEEECCCCEEEECCCCCHHHHHHHHHH CAVQDKEIVAPVMDFSIPRRVRPTFGLVSYGQLKTGKLTIEGKTVKVAPVTSLYLADQVA HHCCCCHHHHHHHHCCCCCCCCCCCCCEECCCEECCEEEEECCEEEEECHHHHHHHHHHH ETLKQWIQAGDFTLTEPVATISGDRPFLSQDQWSQRL HHHHHHHHCCCCEEECCHHCCCCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]