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The map label for this gene is prcA [H]

Identifier: 170076813

GI number: 170076813

Start: 190898

End: 192481

Strand: Direct

Name: prcA [H]

Synonym: SYNPCC7002_A0181

Alternate gene names: 170076813

Gene position: 190898-192481 (Clockwise)

Preceding gene: 170076807

Following gene: 170076819

Centisome position: 6.35

GC content: 53.54

Gene sequence:

>1584_bases
ATGGCACGCCCAGGGGGGACACCACAGCAACAAGGTCTTATTTTACAACGGGGACATACGGAACTTTTACTTCATCAGTT
AGAGGATCGCCTCCTGGTGGCATTTCGCAGTTCTGATGTGGATCTTCTCGATATTGTTCCAGGATTAATGTATCGTCCCT
TACCATCGGGGCAGCCAGATATTTTATTCGAAGAAATTCTTGTACCGCCAGAGGATTTCGCCACCTCCTTGAGGGCCGCG
TGTCAACATCCCGATATTCTCTTTGCTTACCCGGTTTATCAGCTAGCAGACTCGGCTGAGGGCTTTGTCTATCTGACCCA
GCAAATCACCCTCCAATTCGCCCCGGAGGTTTCCCCAGCAGCCCAAAAAGCGATTGGCGATCGCCACCACCTTAAAAAAA
TTCGTCCCCTTCTGGGGGCCGATCAAACGTTTATTTATGAACTAACGGCGCAAACTGACTGCGATCCCCTCTGGTTAACC
CAGATCCTCCAGCAAGATCCGGCGATCGCCCTCGCTGAACCCAATGTTTTATTGCCCCTCGCGGTGCGAGAAATGTCCTT
GGCGACAAATCCCCAAAGCCGCCACTGGTACCTAGACGCCATTCAAATCCCCCAAGCTTGGCAAATGACCAAAGGCGATC
GCCAAACAACCATTGCCGTGTTAGCCTCTGACCTCGATCTAGAAAATTCTGCCGAGCCAATCGCTGAAACAAGCGAAACT
CCCTATGGTGCCATTCCAGAAATTCGGCCCACGACCTGGGGTAATACCATTGCCCAGTTGACGATCGATGTTGCCCCAGA
ATGCACCCTATTGCTCCTGCAACTGCCCCAGTACTTAGATGATGCACTCCTCGAAAAAGTCATCGAAGCGGCGATCGCCC
AGGGGGCCGCAGTGATTCTTTTGGCTTGGCAACTGGCGATGATCAACGGGCCTCTCTCCCTGCGGCAAAGTTTAGCTCTC
CACCGGGCTGCCACCCAGGGAAACCGGGGTCAAGGGTGTCTGTTGGTAACGGGAGCCGGGGATGCCAATCGCCCCTTAGC
CGGAATCATTTATGAACGTCACTGGCCGAATCAACTTTTTCAGGGGCCGACCGCTTGGCTCGACGGGAAGGGTAATCATC
CGGCAGTTGTGACCGTTAGTGGTTGTACTGAGGCGAATAAAAAAGCTAGCCATAGCAACTGGGGAGAGGCCGTTAGCCTT
TGTGGGCCAACGAATCCAGGTACACCAACCCTTTGGCTACCAGAACAGGGCATGGTCGCGGTACCACCGGAAATTAGTGA
TGACTTGGGGGCCGAGATAGATCCGGTTGAAGCTTTAAATCAGCAGGGTAGCACCTTAGAAGCTGCCGCTTTAGTGGCGG
GAGTCGCGGCATTGGTTTGGTCAGTAAATCCGAAGCTGACGGGGTGGGCCGTGCGGGAGATTTTACAAACCACAGCCGAA
AAAATTGTCGATTTAAGCGGCGATCGCCAATTGCAGTTAACCTTGGGCACCTACGACGCCCAGGGCCATTCCCAATGGTT
TGGTTACGGTCGTGTGAATGCCTTGGCAGCAGTTGTCTTAGCCCAGGGCAATCAGCCGGACTGA

Upstream 100 bases:

>100_bases
TTCATAATGTTCGTCAAGTCTTGTTTTGACACAATAACAGTACTGATTATGTTGTACATCTTGATCCCACAGTGGGAACA
GACAAGGAGAGCTTAGGCCT

Downstream 100 bases:

>100_bases
CAGAACAACAGGCATTAACTATTTTGGCCATCGATTAATTTAAAAGCCAACAATGGGACTTGAACCCACGACCTACGCAT
TACGAATGCGTTGCTCTACC

Product: subtilase family peptidase

Products: NA

Alternate protein names: Trypsin [H]

Number of amino acids: Translated: 527; Mature: 526

Protein sequence:

>527_residues
MARPGGTPQQQGLILQRGHTELLLHQLEDRLLVAFRSSDVDLLDIVPGLMYRPLPSGQPDILFEEILVPPEDFATSLRAA
CQHPDILFAYPVYQLADSAEGFVYLTQQITLQFAPEVSPAAQKAIGDRHHLKKIRPLLGADQTFIYELTAQTDCDPLWLT
QILQQDPAIALAEPNVLLPLAVREMSLATNPQSRHWYLDAIQIPQAWQMTKGDRQTTIAVLASDLDLENSAEPIAETSET
PYGAIPEIRPTTWGNTIAQLTIDVAPECTLLLLQLPQYLDDALLEKVIEAAIAQGAAVILLAWQLAMINGPLSLRQSLAL
HRAATQGNRGQGCLLVTGAGDANRPLAGIIYERHWPNQLFQGPTAWLDGKGNHPAVVTVSGCTEANKKASHSNWGEAVSL
CGPTNPGTPTLWLPEQGMVAVPPEISDDLGAEIDPVEALNQQGSTLEAAALVAGVAALVWSVNPKLTGWAVREILQTTAE
KIVDLSGDRQLQLTLGTYDAQGHSQWFGYGRVNALAAVVLAQGNQPD

Sequences:

>Translated_527_residues
MARPGGTPQQQGLILQRGHTELLLHQLEDRLLVAFRSSDVDLLDIVPGLMYRPLPSGQPDILFEEILVPPEDFATSLRAA
CQHPDILFAYPVYQLADSAEGFVYLTQQITLQFAPEVSPAAQKAIGDRHHLKKIRPLLGADQTFIYELTAQTDCDPLWLT
QILQQDPAIALAEPNVLLPLAVREMSLATNPQSRHWYLDAIQIPQAWQMTKGDRQTTIAVLASDLDLENSAEPIAETSET
PYGAIPEIRPTTWGNTIAQLTIDVAPECTLLLLQLPQYLDDALLEKVIEAAIAQGAAVILLAWQLAMINGPLSLRQSLAL
HRAATQGNRGQGCLLVTGAGDANRPLAGIIYERHWPNQLFQGPTAWLDGKGNHPAVVTVSGCTEANKKASHSNWGEAVSL
CGPTNPGTPTLWLPEQGMVAVPPEISDDLGAEIDPVEALNQQGSTLEAAALVAGVAALVWSVNPKLTGWAVREILQTTAE
KIVDLSGDRQLQLTLGTYDAQGHSQWFGYGRVNALAAVVLAQGNQPD
>Mature_526_residues
ARPGGTPQQQGLILQRGHTELLLHQLEDRLLVAFRSSDVDLLDIVPGLMYRPLPSGQPDILFEEILVPPEDFATSLRAAC
QHPDILFAYPVYQLADSAEGFVYLTQQITLQFAPEVSPAAQKAIGDRHHLKKIRPLLGADQTFIYELTAQTDCDPLWLTQ
ILQQDPAIALAEPNVLLPLAVREMSLATNPQSRHWYLDAIQIPQAWQMTKGDRQTTIAVLASDLDLENSAEPIAETSETP
YGAIPEIRPTTWGNTIAQLTIDVAPECTLLLLQLPQYLDDALLEKVIEAAIAQGAAVILLAWQLAMINGPLSLRQSLALH
RAATQGNRGQGCLLVTGAGDANRPLAGIIYERHWPNQLFQGPTAWLDGKGNHPAVVTVSGCTEANKKASHSNWGEAVSLC
GPTNPGTPTLWLPEQGMVAVPPEISDDLGAEIDPVEALNQQGSTLEAAALVAGVAALVWSVNPKLTGWAVREILQTTAEK
IVDLSGDRQLQLTLGTYDAQGHSQWFGYGRVNALAAVVLAQGNQPD

Specific function: Degrades phycobiliproteins in vitro. Has a substrate specificity similar to that of trypsin [H]

COG id: COG1404

COG function: function code O; Subtilisin-like serine proteases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S8 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008979
- InterPro:   IPR000209
- InterPro:   IPR022398
- InterPro:   IPR015500
- InterPro:   IPR002884 [H]

Pfam domain/function: PF01483 P_proprotein; PF00082 Peptidase_S8 [H]

EC number: NA

Molecular weight: Translated: 57043; Mature: 56911

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARPGGTPQQQGLILQRGHTELLLHQLEDRLLVAFRSSDVDLLDIVPGLMYRPLPSGQPD
CCCCCCCCHHCCEEEECCCHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHCCCCCCCCCC
ILFEEILVPPEDFATSLRAACQHPDILFAYPVYQLADSAEGFVYLTQQITLQFAPEVSPA
HHHHHHCCCCHHHHHHHHHHHCCCCEEEECHHHHHHCCCCCEEEEEEEEEEEECCCCCHH
AQKAIGDRHHLKKIRPLLGADQTFIYELTAQTDCDPLWLTQILQQDPAIALAEPNVLLPL
HHHHCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEECCCEEEEH
AVREMSLATNPQSRHWYLDAIQIPQAWQMTKGDRQTTIAVLASDLDLENSAEPIAETSET
HHHHHHHCCCCCCCEEEEEEEECCCHHCCCCCCCCEEEEEEEECCCCCCCCCCCHHCCCC
PYGAIPEIRPTTWGNTIAQLTIDVAPECTLLLLQLPQYLDDALLEKVIEAAIAQGAAVIL
CCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEH
LAWQLAMINGPLSLRQSLALHRAATQGNRGQGCLLVTGAGDANRPLAGIIYERHWPNQLF
HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCHHHH
QGPTAWLDGKGNHPAVVTVSGCTEANKKASHSNWGEAVSLCGPTNPGTPTLWLPEQGMVA
CCCCEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCEE
VPPEISDDLGAEIDPVEALNQQGSTLEAAALVAGVAALVWSVNPKLTGWAVREILQTTAE
CCCCCCHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
KIVDLSGDRQLQLTLGTYDAQGHSQWFGYGRVNALAAVVLAQGNQPD
HHHCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHEECCCCCC
>Mature Secondary Structure 
ARPGGTPQQQGLILQRGHTELLLHQLEDRLLVAFRSSDVDLLDIVPGLMYRPLPSGQPD
CCCCCCCHHCCEEEECCCHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHCCCCCCCCCC
ILFEEILVPPEDFATSLRAACQHPDILFAYPVYQLADSAEGFVYLTQQITLQFAPEVSPA
HHHHHHCCCCHHHHHHHHHHHCCCCEEEECHHHHHHCCCCCEEEEEEEEEEEECCCCCHH
AQKAIGDRHHLKKIRPLLGADQTFIYELTAQTDCDPLWLTQILQQDPAIALAEPNVLLPL
HHHHCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEECCCEEEEH
AVREMSLATNPQSRHWYLDAIQIPQAWQMTKGDRQTTIAVLASDLDLENSAEPIAETSET
HHHHHHHCCCCCCCEEEEEEEECCCHHCCCCCCCCEEEEEEEECCCCCCCCCCCHHCCCC
PYGAIPEIRPTTWGNTIAQLTIDVAPECTLLLLQLPQYLDDALLEKVIEAAIAQGAAVIL
CCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEH
LAWQLAMINGPLSLRQSLALHRAATQGNRGQGCLLVTGAGDANRPLAGIIYERHWPNQLF
HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCHHHH
QGPTAWLDGKGNHPAVVTVSGCTEANKKASHSNWGEAVSLCGPTNPGTPTLWLPEQGMVA
CCCCEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCEE
VPPEISDDLGAEIDPVEALNQQGSTLEAAALVAGVAALVWSVNPKLTGWAVREILQTTAE
CCCCCCHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
KIVDLSGDRQLQLTLGTYDAQGHSQWFGYGRVNALAAVVLAQGNQPD
HHHCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1900347; 8944762 [H]