Click here to switch to the map view.

The map label for this gene is 170076807

Identifier: 170076807

GI number: 170076807

Start: 184149

End: 184550

Strand: Direct

Name: 170076807

Synonym: SYNPCC7002_A0175

Alternate gene names: NA

Gene position: 184149-184550 (Clockwise)

Preceding gene: 170076806

Following gene: 170076813

Centisome position: 6.12

GC content: 46.52

Gene sequence:

>402_bases
ATGCCAAGTATTGTGGATATTGCGGTTAATAATGAGGGTTTTTCAACCCTTGTGGCCGCCGTGCAAGCCGCAGGTTTAGT
GGAAACTTTAGCCGGAGAAGGGGATTTTACCGTCTTTGCGCCCAACGATGACGCTTTCGCCAAATTGCCCCCCGGCACGA
TTCAAACCCTTGTGCAAAATCCGCCCCAGTTAGCGCGTATTCTCACTTATCACGTCGCGGCGGGACGGTTAACTAAGGAT
GATTTAATCAAACTTGGGGAAGTGACTTCCATCGAAGGTTCCCCCATTCCCATTAATGGTGAAGATGATTTTGAGGTCAA
AAATGCAACGGTTTTAGCGGCTGACATCGAAGCTGACAATGGCATTATTCATGTAATTGATAATGTTATTTTGATGGGCT
AA

Upstream 100 bases:

>100_bases
CGTTTTCTCCGGCCAGAAGCCCGCTTACGGGACATTCAAAACGCAGAATATCGTTAATCTATTTTGAATTTCTTTTATTT
AGTCAATCGGAGCTTAAACA

Downstream 100 bases:

>100_bases
TTTTTCTAGAATCAAAAAACAAAAAGGCTTCTATCTATAACGGATTAAGAAGCCTCTTTTTTTTGACTATTTAAACTAAT
TTTAGGGAGTGATGATCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MPSIVDIAVNNEGFSTLVAAVQAAGLVETLAGEGDFTVFAPNDDAFAKLPPGTIQTLVQNPPQLARILTYHVAAGRLTKD
DLIKLGEVTSIEGSPIPINGEDDFEVKNATVLAADIEADNGIIHVIDNVILMG

Sequences:

>Translated_133_residues
MPSIVDIAVNNEGFSTLVAAVQAAGLVETLAGEGDFTVFAPNDDAFAKLPPGTIQTLVQNPPQLARILTYHVAAGRLTKD
DLIKLGEVTSIEGSPIPINGEDDFEVKNATVLAADIEADNGIIHVIDNVILMG
>Mature_132_residues
PSIVDIAVNNEGFSTLVAAVQAAGLVETLAGEGDFTVFAPNDDAFAKLPPGTIQTLVQNPPQLARILTYHVAAGRLTKDD
LIKLGEVTSIEGSPIPINGEDDFEVKNATVLAADIEADNGIIHVIDNVILMG

Specific function: Unknown

COG id: COG2335

COG function: function code M; Secreted and surface protein containing fasciclin-like repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAS1 domain

Homologues:

Organism=Homo sapiens, GI4507467, Length=131, Percent_Identity=38.1679389312977, Blast_Score=89, Evalue=9e-19,
Organism=Homo sapiens, GI209863034, Length=131, Percent_Identity=29.0076335877863, Blast_Score=64, Evalue=3e-11,
Organism=Homo sapiens, GI209862911, Length=131, Percent_Identity=29.0076335877863, Blast_Score=64, Evalue=3e-11,
Organism=Homo sapiens, GI209863011, Length=131, Percent_Identity=29.0076335877863, Blast_Score=64, Evalue=3e-11,
Organism=Homo sapiens, GI209862907, Length=131, Percent_Identity=29.0076335877863, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y175_SYNP2 (O33752)

Other databases:

- EMBL:   U97516
- EMBL:   CP000951
- PIR:   T14238
- RefSeq:   YP_001733445.1
- ProteinModelPortal:   O33752
- SMR:   O33752
- GeneID:   6057151
- GenomeReviews:   CP000951_GR
- KEGG:   syp:SYNPCC7002_A0175
- HOGENOM:   HBG750250
- OMA:   IEADNGV
- InterPro:   IPR000782
- Gene3D:   G3DSA:2.30.180.10
- SMART:   SM00554

Pfam domain/function: PF02469 Fasciclin; SSF82153 BIgH3_FAS1

EC number: NA

Molecular weight: Translated: 13921; Mature: 13790

Theoretical pI: Translated: 3.88; Mature: 3.88

Prosite motif: PS50213 FAS1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSIVDIAVNNEGFSTLVAAVQAAGLVETLAGEGDFTVFAPNDDAFAKLPPGTIQTLVQN
CCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEECCCHHHHHHHCC
PPQLARILTYHVAAGRLTKDDLIKLGEVTSIEGSPIPINGEDDFEVKNATVLAADIEADN
CHHHHHHHHHHHHCCCCCHHHHHCCCCEEECCCCCCCCCCCCCCEECCEEEEEEECCCCC
GIIHVIDNVILMG
CEEEEECEEEECC
>Mature Secondary Structure 
PSIVDIAVNNEGFSTLVAAVQAAGLVETLAGEGDFTVFAPNDDAFAKLPPGTIQTLVQN
CCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEECCCHHHHHHHCC
PPQLARILTYHVAAGRLTKDDLIKLGEVTSIEGSPIPINGEDDFEVKNATVLAADIEADN
CHHHHHHHHHHHHCCCCCHHHHHCCCCEEECCCCCCCCCCCCCCEECCEEEEEEECCCCC
GIIHVIDNVILMG
CEEEEECEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA