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The map label for this gene is psbZ

Identifier: 170076768

GI number: 170076768

Start: 134875

End: 135063

Strand: Direct

Name: psbZ

Synonym: SYNPCC7002_A0135

Alternate gene names: 170076768

Gene position: 134875-135063 (Clockwise)

Preceding gene: 170076766

Following gene: 170076769

Centisome position: 4.48

GC content: 46.56

Gene sequence:

>189_bases
ATGACTATTTTATTCCAACTTGCCCTTGCTGCCCTCGTGGCCCTTTCGTTCCTGATGGTAATTGGTGTTCCTGTTGCCTA
TGCTTCCCCCACCAACTGGGAACAGTCCAAATCCTTGATTTTTGTCGGTTCCATTGCTTGGACTGTTTTGGTCATTGCCG
TCGGTGTCCTGAATTTTTTCGTGATCTAA

Upstream 100 bases:

>100_bases
CTTACTATAAACAATGAAAACTTTAGGATTTTCAAAACCCTATTTGGCATCCTAAGCCCATAAACCCCATTTGCTTGCTG
TCTTGGGAGAATTTTAAAAA

Downstream 100 bases:

>100_bases
CCACGCACATTCCTATGTTTGGCGATCAGGACGGCCCTGATCTCCCCCAAGGTGCAATCTTCTGCGTTGGCAACCTCAAC
GTGATTGCACCTTAATTTTT

Product: photosystem II reaction center protein Z

Products: NA

Alternate protein names: PSII-Z

Number of amino acids: Translated: 62; Mature: 61

Protein sequence:

>62_residues
MTILFQLALAALVALSFLMVIGVPVAYASPTNWEQSKSLIFVGSIAWTVLVIAVGVLNFFVI

Sequences:

>Translated_62_residues
MTILFQLALAALVALSFLMVIGVPVAYASPTNWEQSKSLIFVGSIAWTVLVIAVGVLNFFVI
>Mature_61_residues
TILFQLALAALVALSFLMVIGVPVAYASPTNWEQSKSLIFVGSIAWTVLVIAVGVLNFFVI

Specific function: Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein. Note=Associated with the photosystem II complex (By similarity)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbZ family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSBZ_SYNP2 (B1XLJ0)

Other databases:

- EMBL:   CP000951
- RefSeq:   YP_001733406.1
- ProteinModelPortal:   B1XLJ0
- SMR:   B1XLJ0
- GeneID:   6056794
- GenomeReviews:   CP000951_GR
- KEGG:   syp:SYNPCC7002_A0135
- HOGENOM:   HBG712001
- OMA:   VAYASPQ
- ProtClustDB:   PRK02576
- GO:   GO:0015979
- HAMAP:   MF_00644
- InterPro:   IPR002644
- Gene3D:   G3DSA:1.10.287.740
- ProDom:   PD004770
- TIGRFAMs:   TIGR03043

Pfam domain/function: PF01737 Ycf9

EC number: NA

Molecular weight: Translated: 6655; Mature: 6524

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x18f701cc)-; HASH(0x15e33cb8)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTILFQLALAALVALSFLMVIGVPVAYASPTNWEQSKSLIFVGSIAWTVLVIAVGVLNFF
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHH
VI
CH
>Mature Secondary Structure 
TILFQLALAALVALSFLMVIGVPVAYASPTNWEQSKSLIFVGSIAWTVLVIAVGVLNFF
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHH
VI
CH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA