Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is 170076762

Identifier: 170076762

GI number: 170076762

Start: 130195

End: 130581

Strand: Direct

Name: 170076762

Synonym: SYNPCC7002_A0129

Alternate gene names: NA

Gene position: 130195-130581 (Clockwise)

Preceding gene: 170076757

Following gene: 170076766

Centisome position: 4.33

GC content: 43.93

Gene sequence:

>387_bases
ATGGCTACAAAGAAAAAGATTGAAACATTGACCGGTGATGCACTGCTCGCAAAAGTTAAGGAGCTTGAAAACCACAGTAA
AGAAGAAAAAGCAAGAGCTTGCGGCTATTACACGATCACCAAGAATGGGGTTGAACGTGTCAATATGATGAAGTTCTATA
ACGCTCTCATCGAAGCAGAAGGGGTGCAGTTAGATAGCAATACAAATGCCCAAGGTCGGGGGGGTCGTGCTGCCACCTAT
CGTATTAGTGTACAGTCCAATGGGAATCTTTTGATTGGGTCTGCCTACACCAAAAAAATGGGACTCCAGCCCGGTGATGA
ATTTGAAATTTCTTTAGGTCGCAAACATATTCACCTCAAACAACTGGGTGCCGATGGTGATGATTAA

Upstream 100 bases:

>100_bases
CAGCTAATTTAAAAGTTTAAGGTGCGCAGCGAAGTAAAAAAAGAATTCGCAGGCTTCATCCCATAACTCTCATTTATCGT
CATTCATTCGTAATAAGTAA

Downstream 100 bases:

>100_bases
ATTTTCCTAGGAATTAATCTGCACAAATCGAGATAGCGATCGCCATGGTGGGGGTCGTTTTTTTGTGAAAATTACCATTG
ACTGGGGTGATGTTGTTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MATKKKIETLTGDALLAKVKELENHSKEEKARACGYYTITKNGVERVNMMKFYNALIEAEGVQLDSNTNAQGRGGRAATY
RISVQSNGNLLIGSAYTKKMGLQPGDEFEISLGRKHIHLKQLGADGDD

Sequences:

>Translated_128_residues
MATKKKIETLTGDALLAKVKELENHSKEEKARACGYYTITKNGVERVNMMKFYNALIEAEGVQLDSNTNAQGRGGRAATY
RISVQSNGNLLIGSAYTKKMGLQPGDEFEISLGRKHIHLKQLGADGDD
>Mature_127_residues
ATKKKIETLTGDALLAKVKELENHSKEEKARACGYYTITKNGVERVNMMKFYNALIEAEGVQLDSNTNAQGRGGRAATYR
ISVQSNGNLLIGSAYTKKMGLQPGDEFEISLGRKHIHLKQLGADGDD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14032; Mature: 13901

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATKKKIETLTGDALLAKVKELENHSKEEKARACGYYTITKNGVERVNMMKFYNALIEAE
CCCCHHHHHHCCHHHHHHHHHHHCCCHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHC
GVQLDSNTNAQGRGGRAATYRISVQSNGNLLIGSAYTKKMGLQPGDEFEISLGRKHIHLK
CEEECCCCCCCCCCCCEEEEEEEEECCCCEEEECCHHHHCCCCCCCCEEEEECCCEEEEE
QLGADGDD
ECCCCCCC
>Mature Secondary Structure 
ATKKKIETLTGDALLAKVKELENHSKEEKARACGYYTITKNGVERVNMMKFYNALIEAE
CCCHHHHHHCCHHHHHHHHHHHCCCHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHC
GVQLDSNTNAQGRGGRAATYRISVQSNGNLLIGSAYTKKMGLQPGDEFEISLGRKHIHLK
CEEECCCCCCCCCCCCEEEEEEEEECCCCEEEECCHHHHCCCCCCCCEEEEECCCEEEEE
QLGADGDD
ECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA