Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

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The map label for this gene is 170025846

Identifier: 170025846

GI number: 170025846

Start: 4008140

End: 4008301

Strand: Reverse

Name: 170025846

Synonym: YPK_3631

Alternate gene names: NA

Gene position: 4008301-4008140 (Counterclockwise)

Preceding gene: 170025847

Following gene: 170025845

Centisome position: 85.48

GC content: 46.3

Gene sequence:

>162_bases
ATGTTTCGCTGGGGCATTATTTTTCTAATTATTGCGTTAATCGCGGCCGCATTAGGTTTTGGTGGATTGGCCGGTACTGC
GGCTTGGGCAGCAAAAGTGGTCTTTGTAGTGGGGATTATTTTGTTCCTCATCAGTCTGTTTACGGGACGTAAGCGCCTTT
AA

Upstream 100 bases:

>100_bases
CCCCAAGCCGTTCGTCAACTGAGTTAATTTCCTCTGAGAGCCAAATGAAAGGGTGTCTGTTTAATCAGGCACCTTATCTT
TAAACTGGAAGGAGAAGCTT

Downstream 100 bases:

>100_bases
CAAGGCAGTAGGGGTGACAGCAAAGGGCAATAAGGGGTATCGTCAACACCTGTTCGTCATGAATTAAGGATAGATGGTGG
GATACAGAATACCTATTACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 53; Mature: 53

Protein sequence:

>53_residues
MFRWGIIFLIIALIAAALGFGGLAGTAAWAAKVVFVVGIILFLISLFTGRKRL

Sequences:

>Translated_53_residues
MFRWGIIFLIIALIAAALGFGGLAGTAAWAAKVVFVVGIILFLISLFTGRKRL
>Mature_53_residues
MFRWGIIFLIIALIAAALGFGGLAGTAAWAAKVVFVVGIILFLISLFTGRKRL

Specific function: Unknown

COG id: COG5487

COG function: function code S; Small integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0391 family [H]

Homologues:

Organism=Escherichia coli, GI145693221, Length=52, Percent_Identity=90.3846153846154, Blast_Score=62, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009760 [H]

Pfam domain/function: PF07043 DUF1328 [H]

EC number: NA

Molecular weight: Translated: 5665; Mature: 5665

Theoretical pI: Translated: 12.81; Mature: 12.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRWGIIFLIIALIAAALGFGGLAGTAAWAAKVVFVVGIILFLISLFTGRKRL
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MFRWGIIFLIIALIAAALGFGGLAGTAAWAAKVVFVVGIILFLISLFTGRKRL
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA