Definition Yersinia pseudotuberculosis YPIII chromosome, complete genome.
Accession NC_010465
Length 4,689,441

Click here to switch to the map view.

The map label for this gene is 170024524

Identifier: 170024524

GI number: 170024524

Start: 2545317

End: 2545595

Strand: Direct

Name: 170024524

Synonym: YPK_2299

Alternate gene names: NA

Gene position: 2545317-2545595 (Clockwise)

Preceding gene: 170024523

Following gene: 170024525

Centisome position: 54.28

GC content: 42.29

Gene sequence:

>279_bases
ATGGCAACACTTGTCCGTAGGTTATTGAAGGTACTATTTTTTATCGGCCTGTTTATACTGGCGGTTAAGTATATCCATAG
TTACCCCTATCCGATGCCTGAGAGCCAGTTACAGTACTGGTTCAGTATCTCAGAGTTTTTGGGGTTCAGTAACCCCGAAG
ATATCTATTTCCCGGCAATGCTGGTTCTCGATATTATTGTCGCATCGCTAGCTTATGTGCTTATTATAAAGGGATTTCAT
AAGTTCAGAACACGAAAAAAGACGTCACACGCGGGATAG

Upstream 100 bases:

>100_bases
GCCGATTTTCAGGTGCTGCGCAAAGCCCTACTCCACACACAAACCATTGCAGTTAATGGAACTAAATTGATGGCCTATGG
GTGTATTGAGGTGGTGACGA

Downstream 100 bases:

>100_bases
AAAAATCACTTTCCTGTTAATGGTAACCACTCTATATCGCGTAAAGTGGTTACCCGTTTTATAGTTTTCTCGTTGTGCCA
TTCGCCACCCAACCCTCATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 92; Mature: 91

Protein sequence:

>92_residues
MATLVRRLLKVLFFIGLFILAVKYIHSYPYPMPESQLQYWFSISEFLGFSNPEDIYFPAMLVLDIIVASLAYVLIIKGFH
KFRTRKKTSHAG

Sequences:

>Translated_92_residues
MATLVRRLLKVLFFIGLFILAVKYIHSYPYPMPESQLQYWFSISEFLGFSNPEDIYFPAMLVLDIIVASLAYVLIIKGFH
KFRTRKKTSHAG
>Mature_91_residues
ATLVRRLLKVLFFIGLFILAVKYIHSYPYPMPESQLQYWFSISEFLGFSNPEDIYFPAMLVLDIIVASLAYVLIIKGFHK
FRTRKKTSHAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10719; Mature: 10588

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLVRRLLKVLFFIGLFILAVKYIHSYPYPMPESQLQYWFSISEFLGFSNPEDIYFPAM
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHH
LVLDIIVASLAYVLIIKGFHKFRTRKKTSHAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ATLVRRLLKVLFFIGLFILAVKYIHSYPYPMPESQLQYWFSISEFLGFSNPEDIYFPAM
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHH
LVLDIIVASLAYVLIIKGFHKFRTRKKTSHAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA