Click here to switch to the map view.

The map label for this gene is 170024525

Identifier: 170024525

GI number: 170024525

Start: 2545760

End: 2546929

Strand: Direct

Name: 170024525

Synonym: YPK_2300

Alternate gene names: NA

Gene position: 2545760-2546929 (Clockwise)

Preceding gene: 170024524

Following gene: 170024526

Centisome position: 54.29

GC content: 52.82

Gene sequence:

>1170_bases
ATGAGTGATTATCATCACGGCGCGCGCGTCATCGAAATCAACGACGGTACTCGCGTTATTTCCACTGTTTCCACCGCCAT
TATCGGCATGGTCTGTACTTCCGATGATGCTGACCCCACTCTGTTCCCACTCAATACCCCGGTATTACTCACCGATGTGC
TGGCCGCCAGCGGCAAGGCCGGTGAAACCGGCACATTAGCCCATTCACTGGATGCTATCAGCGACCAAACCAAACCACTG
ACCGTCGTTGTCCGGGTGGCGCAGGGTGAAACCGAAGCTGAAACCACGTCAAATATTATTGGCGGAATAACACCGGATGG
CCGTTATACCGGCATGAAAGCGCTGTTAGCGGCGCAGGGTAAGTTTGACGTCAAGCCCCGTATTTTAGGGGTTCCCGGTC
ATGACACTCTGGCGGTATCCACTGAGCTACTTTCCATCGCTCAGAGCCTACGTGCCTTTGCCTACATCAGCGCCTATGGT
TGCAAAACCAAAGAAGAGGCCATTATCTACCGCGATAATTTCAGTCAGCGCGAAGCGATGGTGATTTGGCCCGATTTCCT
CAGTTGGGACACGGTCACTAACGCCGAAACCACCGCTTACGCCACGGCTCGCGCCCTCGGCTTACGTGCCAAGATTGATA
ATGATGTTGGCTGGCATAAAACGCTGTCTAACGTCGGGGTGAATGGCGTCACCGGTATCAGTGCGGATGTGTTCTGGGAT
CTGCAAAACAGCGCTACCGATGCCAATTTGCTCAACAGTAAAGACGTCACCACGCTGATCCGCAAAGATGGTTACCGTTT
TTGGGGTTCCCGTTCTTGTTCTGACGATCCGTTATTTGCCTTTGAGAACTACACCCGCACCGCACAGGTACTGGCTGACA
CCCTGGCCGAGGCCCATATGTGGGCTAACGATAAGCCGCTTACCCCGTCACTGGCAAAAGACATTATTGAGGGTATTCGC
GCCAAAATGCGCGAGCTGAAATCATTGGGTTATCTGATTGATGGTGACTGCTGGTACGACGACAGCGTAAACGATAAAGA
CACACTAAAGGCTGGCCGCCTGTTTATTGATTACGACTATACGCCGGTGCCGCCGCTGGAAGATTTAACCCTGCGTCAAC
GCATTACTGATCGTTATCTGGCTAATTTCGCCGCCGCCGTTAACAGCTAA

Upstream 100 bases:

>100_bases
TTTTCTCGTTGTGCCATTCGCCACCCAACCCTCATCAATCGCCACCCGCACAAATTGCCGTCACCATACTCTCTACCCTC
AACCAGCAGAGAGTTAATCC

Downstream 100 bases:

>100_bases
GGAGCGTAACTATGGCATTACCACGCAAGCTTAAGTTCCTCAATGTGTTCAATGACGGGAACAGCTATCAGGGGGTGGTT
GAATCCATCACCTTGCCAAA

Product: tail sheath protein

Products: NA

Alternate protein names: Phage Tail Sheath Protein; Bacteriophage Tail Sheath Protein; Phage Tail Sheath Protein; Phage Tail Sheath Protein FI; Tail Sheath Protein FI; Phage-Related Tail Sheath Protein; Phage-Related Tail Protein; Phage TAIL SHEATH PROTEIN; Phage Tail Sheath-Like Protein; Prophage; Prophage Tail Sheath; Phage P2 Tail Sheath FI-Like Protein; Tail Sheath Protein Bacteriophage; Bacteriophage Tail Sheath Protein; Bacteriophage P2 Tail Sheath Protein GPFI; Pyocin R2_PP Tail Sheath Protein GpFI; Pyocin R2_PP Tail Sheath Protein; Bacteriophage Tail Sheath Protein FI; Phage-Related Tail Sheath Protein; Bacteriophage Contractile Tail Sheath Protein; Bacteriophage P2 Tail Sheath Protein

Number of amino acids: Translated: 389; Mature: 388

Protein sequence:

>389_residues
MSDYHHGARVIEINDGTRVISTVSTAIIGMVCTSDDADPTLFPLNTPVLLTDVLAASGKAGETGTLAHSLDAISDQTKPL
TVVVRVAQGETEAETTSNIIGGITPDGRYTGMKALLAAQGKFDVKPRILGVPGHDTLAVSTELLSIAQSLRAFAYISAYG
CKTKEEAIIYRDNFSQREAMVIWPDFLSWDTVTNAETTAYATARALGLRAKIDNDVGWHKTLSNVGVNGVTGISADVFWD
LQNSATDANLLNSKDVTTLIRKDGYRFWGSRSCSDDPLFAFENYTRTAQVLADTLAEAHMWANDKPLTPSLAKDIIEGIR
AKMRELKSLGYLIDGDCWYDDSVNDKDTLKAGRLFIDYDYTPVPPLEDLTLRQRITDRYLANFAAAVNS

Sequences:

>Translated_389_residues
MSDYHHGARVIEINDGTRVISTVSTAIIGMVCTSDDADPTLFPLNTPVLLTDVLAASGKAGETGTLAHSLDAISDQTKPL
TVVVRVAQGETEAETTSNIIGGITPDGRYTGMKALLAAQGKFDVKPRILGVPGHDTLAVSTELLSIAQSLRAFAYISAYG
CKTKEEAIIYRDNFSQREAMVIWPDFLSWDTVTNAETTAYATARALGLRAKIDNDVGWHKTLSNVGVNGVTGISADVFWD
LQNSATDANLLNSKDVTTLIRKDGYRFWGSRSCSDDPLFAFENYTRTAQVLADTLAEAHMWANDKPLTPSLAKDIIEGIR
AKMRELKSLGYLIDGDCWYDDSVNDKDTLKAGRLFIDYDYTPVPPLEDLTLRQRITDRYLANFAAAVNS
>Mature_388_residues
SDYHHGARVIEINDGTRVISTVSTAIIGMVCTSDDADPTLFPLNTPVLLTDVLAASGKAGETGTLAHSLDAISDQTKPLT
VVVRVAQGETEAETTSNIIGGITPDGRYTGMKALLAAQGKFDVKPRILGVPGHDTLAVSTELLSIAQSLRAFAYISAYGC
KTKEEAIIYRDNFSQREAMVIWPDFLSWDTVTNAETTAYATARALGLRAKIDNDVGWHKTLSNVGVNGVTGISADVFWDL
QNSATDANLLNSKDVTTLIRKDGYRFWGSRSCSDDPLFAFENYTRTAQVLADTLAEAHMWANDKPLTPSLAKDIIEGIRA
KMRELKSLGYLIDGDCWYDDSVNDKDTLKAGRLFIDYDYTPVPPLEDLTLRQRITDRYLANFAAAVNS

Specific function: Unknown

COG id: COG3497

COG function: function code R; Phage tail sheath protein FI

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42445; Mature: 42314

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDYHHGARVIEINDGTRVISTVSTAIIGMVCTSDDADPTLFPLNTPVLLTDVLAASGKA
CCCCCCCCEEEEECCCCHHHHHHHHHHHEEEEECCCCCCEEEECCCCHHHHHHHHHCCCC
GETGTLAHSLDAISDQTKPLTVVVRVAQGETEAETTSNIIGGITPDGRYTGMKALLAAQG
CCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCC
KFDVKPRILGVPGHDTLAVSTELLSIAQSLRAFAYISAYGCKTKEEAIIYRDNFSQREAM
CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEE
VIWPDFLSWDTVTNAETTAYATARALGLRAKIDNDVGWHKTLSNVGVNGVTGISADVFWD
EEECCCCCCCCCCCCCHHHHHHHHHHEEEEECCCCCCHHHHHHHCCCCCCCCCCCEEEEE
LQNSATDANLLNSKDVTTLIRKDGYRFWGSRSCSDDPLFAFENYTRTAQVLADTLAEAHM
CCCCCCCCHHCCCCHHHHHHHHCCCEECCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHH
WANDKPLTPSLAKDIIEGIRAKMRELKSLGYLIDGDCWYDDSVNDKDTLKAGRLFIDYDY
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCEEECCCCCCHHHHHHCEEEEEECC
TPVPPLEDLTLRQRITDRYLANFAAAVNS
CCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SDYHHGARVIEINDGTRVISTVSTAIIGMVCTSDDADPTLFPLNTPVLLTDVLAASGKA
CCCCCCCEEEEECCCCHHHHHHHHHHHEEEEECCCCCCEEEECCCCHHHHHHHHHCCCC
GETGTLAHSLDAISDQTKPLTVVVRVAQGETEAETTSNIIGGITPDGRYTGMKALLAAQG
CCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCCC
KFDVKPRILGVPGHDTLAVSTELLSIAQSLRAFAYISAYGCKTKEEAIIYRDNFSQREAM
CCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEE
VIWPDFLSWDTVTNAETTAYATARALGLRAKIDNDVGWHKTLSNVGVNGVTGISADVFWD
EEECCCCCCCCCCCCCHHHHHHHHHHEEEEECCCCCCHHHHHHHCCCCCCCCCCCEEEEE
LQNSATDANLLNSKDVTTLIRKDGYRFWGSRSCSDDPLFAFENYTRTAQVLADTLAEAHM
CCCCCCCCHHCCCCHHHHHHHHCCCEECCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHH
WANDKPLTPSLAKDIIEGIRAKMRELKSLGYLIDGDCWYDDSVNDKDTLKAGRLFIDYDY
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCEEECCCCCCHHHHHHCEEEEEECC
TPVPPLEDLTLRQRITDRYLANFAAAVNS
CCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA