| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170024523
Identifier: 170024523
GI number: 170024523
Start: 2544818
End: 2545336
Strand: Direct
Name: 170024523
Synonym: YPK_2298
Alternate gene names: NA
Gene position: 2544818-2545336 (Clockwise)
Preceding gene: 170024522
Following gene: 170024524
Centisome position: 54.27
GC content: 46.82
Gene sequence:
>519_bases ATGGCATTACAAGGAAAGTTTGTTGTTAACAATGCTCACTACTCCCCTTTGAGTATTTTTGGTGTTGGTACATTTATGGC CTTTTCTGGCAATAAGGCATACCGCAACAGAGGCGGCTGTACCATGGTCCCTGATAACGGGCCATTACCCGAGGGGTGCT ACTGGATTGTTGAGCGCCCTAAAGGCGGGGTTAAAACCCGCATTAATACCGCAATGAAAGATTTCCCCACCAAGTTTACC CATGCACCGACTGACCATAATGAATGGTTTGGCTTGTACCGTGATGATGGGAAAATTGACGATTACACTTGGATCAATAA TGTTGAACGTGGACATTTCAGATTGCATCCCATCGGCCCGATGGGGGTTTCTATGGGGTGTATCACGTTACAACATGCTG CCGATTTTCAGGTGCTGCGCAAAGCCCTACTCCACACACAAACCATTGCAGTTAATGGAACTAAATTGATGGCCTATGGG TGTATTGAGGTGGTGACGAATGGCAACACTTGTCCGTAG
Upstream 100 bases:
>100_bases ATAAGTTATGTTTTGGTTGTTTCGTTACTTACTTGGATAAGTGATTTGCTTTACAATGCAATAGACGCAAGACAGTATTA AATAAAAATATGAGGACACT
Downstream 100 bases:
>100_bases GTTATTGAAGGTACTATTTTTTATCGGCCTGTTTATACTGGCGGTTAAGTATATCCATAGTTACCCCTATCCGATGCCTG AGAGCCAGTTACAGTACTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MALQGKFVVNNAHYSPLSIFGVGTFMAFSGNKAYRNRGGCTMVPDNGPLPEGCYWIVERPKGGVKTRINTAMKDFPTKFT HAPTDHNEWFGLYRDDGKIDDYTWINNVERGHFRLHPIGPMGVSMGCITLQHAADFQVLRKALLHTQTIAVNGTKLMAYG CIEVVTNGNTCP
Sequences:
>Translated_172_residues MALQGKFVVNNAHYSPLSIFGVGTFMAFSGNKAYRNRGGCTMVPDNGPLPEGCYWIVERPKGGVKTRINTAMKDFPTKFT HAPTDHNEWFGLYRDDGKIDDYTWINNVERGHFRLHPIGPMGVSMGCITLQHAADFQVLRKALLHTQTIAVNGTKLMAYG CIEVVTNGNTCP >Mature_171_residues ALQGKFVVNNAHYSPLSIFGVGTFMAFSGNKAYRNRGGCTMVPDNGPLPEGCYWIVERPKGGVKTRINTAMKDFPTKFTH APTDHNEWFGLYRDDGKIDDYTWINNVERGHFRLHPIGPMGVSMGCITLQHAADFQVLRKALLHTQTIAVNGTKLMAYGC IEVVTNGNTCP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19066; Mature: 18935
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALQGKFVVNNAHYSPLSIFGVGTFMAFSGNKAYRNRGGCTMVPDNGPLPEGCYWIVERP CCCCCEEEEECCCCCCEEEEEEEEEEEECCCHHHHCCCCEEECCCCCCCCCCEEEEEECC KGGVKTRINTAMKDFPTKFTHAPTDHNEWFGLYRDDGKIDDYTWINNVERGHFRLHPIGP CCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCC MGVSMGCITLQHAADFQVLRKALLHTQTIAVNGTKLMAYGCIEVVTNGNTCP CCCEECEEEEECCCCHHHHHHHHHHHEEEEECCCEEEEEEEEEEEECCCCCC >Mature Secondary Structure ALQGKFVVNNAHYSPLSIFGVGTFMAFSGNKAYRNRGGCTMVPDNGPLPEGCYWIVERP CCCCEEEEECCCCCCEEEEEEEEEEEECCCHHHHCCCCEEECCCCCCCCCCEEEEEECC KGGVKTRINTAMKDFPTKFTHAPTDHNEWFGLYRDDGKIDDYTWINNVERGHFRLHPIGP CCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCC MGVSMGCITLQHAADFQVLRKALLHTQTIAVNGTKLMAYGCIEVVTNGNTCP CCCEECEEEEECCCCHHHHHHHHHHHEEEEECCCEEEEEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA