| Definition | Yersinia pseudotuberculosis YPIII chromosome, complete genome. |
|---|---|
| Accession | NC_010465 |
| Length | 4,689,441 |
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The map label for this gene is 170023018
Identifier: 170023018
GI number: 170023018
Start: 873844
End: 874437
Strand: Direct
Name: 170023018
Synonym: YPK_0769
Alternate gene names: NA
Gene position: 873844-874437 (Clockwise)
Preceding gene: 170023017
Following gene: 170023019
Centisome position: 18.63
GC content: 29.29
Gene sequence:
>594_bases ATGAGTTTTTTTGATACGTCCTTTGAAGGTAAGCTTATTGAAGCTGTTAAAATGGATTTTTTTGATCTTTTAAATAAAGT TGAAAATGAAAATATATATGCAATTAGTTTAGTGGTAGATAGCGATGTGAGTGGGTTTTTTCTGGTTTTTAATACATTGG AGTTTTTAGAGAGAAAAGATTTTGTTTTATCTCAAAATGACAATTTAAAAGAATTTAGAGAATTTATGTCTCCAGAGGAA ATTAAGAAAATGTTTGGGGATTATGATGGTGGTTTTAAAAGTACAAAATGGATCCCGACTGAGTGGGGCTATGGGAATAA CTCGTTGGAGTACAGTAAGATAAATGTCATTAATAAGGAGTTATCTAAGGTAAGTGAATCATTAAATAATGGATTTATTT TTGAAAAAAAAGTTCATGGGATGATGATATCATCTTTGTTGGCTTTAAAAGAAACGCTTGGATTTGATTTTAATGAGGTT GTCTTCTTTGTCTCTATGTCTGATGATGAGCGAGTAAGAGAAATTGAAAATTCATCAGCTAAAATATTGAATTCGGAAAG TATTTATGATGAATTTATAAATAGGTTTTCTTGA
Upstream 100 bases:
>100_bases GCTCAAATGGAATCTGGGGAGATAGATAAAAAATGTGCAAAAGGAAAAATGGAATCTCGACTCCAGTCAATTGGTCAGTC AGTTTTTGGAGGATATTAAT
Downstream 100 bases:
>100_bases TTTTTATATGATGATGCTAAATAATTCGATTTTATCGATGATATTTTAGATTCTGTGAATAATTTTTTTAATTACCTATC GATATATTAAAGGTGATCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MSFFDTSFEGKLIEAVKMDFFDLLNKVENENIYAISLVVDSDVSGFFLVFNTLEFLERKDFVLSQNDNLKEFREFMSPEE IKKMFGDYDGGFKSTKWIPTEWGYGNNSLEYSKINVINKELSKVSESLNNGFIFEKKVHGMMISSLLALKETLGFDFNEV VFFVSMSDDERVREIENSSAKILNSESIYDEFINRFS
Sequences:
>Translated_197_residues MSFFDTSFEGKLIEAVKMDFFDLLNKVENENIYAISLVVDSDVSGFFLVFNTLEFLERKDFVLSQNDNLKEFREFMSPEE IKKMFGDYDGGFKSTKWIPTEWGYGNNSLEYSKINVINKELSKVSESLNNGFIFEKKVHGMMISSLLALKETLGFDFNEV VFFVSMSDDERVREIENSSAKILNSESIYDEFINRFS >Mature_196_residues SFFDTSFEGKLIEAVKMDFFDLLNKVENENIYAISLVVDSDVSGFFLVFNTLEFLERKDFVLSQNDNLKEFREFMSPEEI KKMFGDYDGGFKSTKWIPTEWGYGNNSLEYSKINVINKELSKVSESLNNGFIFEKKVHGMMISSLLALKETLGFDFNEVV FFVSMSDDERVREIENSSAKILNSESIYDEFINRFS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22875; Mature: 22744
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFFDTSFEGKLIEAVKMDFFDLLNKVENENIYAISLVVDSDVSGFFLVFNTLEFLERKD CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHCC FVLSQNDNLKEFREFMSPEEIKKMFGDYDGGFKSTKWIPTEWGYGNNSLEYSKINVINKE CEECCCCCHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH LSKVSESLNNGFIFEKKVHGMMISSLLALKETLGFDFNEVVFFVSMSDDERVREIENSSA HHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCHHHHHHHCCCH KILNSESIYDEFINRFS HHCCCHHHHHHHHHHCC >Mature Secondary Structure SFFDTSFEGKLIEAVKMDFFDLLNKVENENIYAISLVVDSDVSGFFLVFNTLEFLERKD CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHCC FVLSQNDNLKEFREFMSPEEIKKMFGDYDGGFKSTKWIPTEWGYGNNSLEYSKINVINKE CEECCCCCHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH LSKVSESLNNGFIFEKKVHGMMISSLLALKETLGFDFNEVVFFVSMSDDERVREIENSSA HHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCHHHHHHHCCCH KILNSESIYDEFINRFS HHCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA