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The map label for this gene is rhsB [H]

Identifier: 170023019

GI number: 170023019

Start: 874708

End: 876789

Strand: Direct

Name: rhsB [H]

Synonym: YPK_0770

Alternate gene names: 170023019

Gene position: 874708-876789 (Clockwise)

Preceding gene: 170023018

Following gene: 170023020

Centisome position: 18.65

GC content: 54.27

Gene sequence:

>2082_bases
TTGCAAAGCCGTACCGATCCGGATGGCAGCCTGACCGAGTACCTGTACGACACCGAAGAACAGTTGATTGGGGTGAAAAA
TCAGCGCGGTAAAACGTGGCAGCTCAAGCGTAACGCCGAAGGGCGGTTAATCGAAGAAGTGGATTACTGGGGGCAGAGCC
GCGGTTATCAGTACAATGCGGTTGGGCATTTAACCGGCAGTCACGATCCGCTAGGGCAGATATTGGCGGTCACCTGCGAC
AAATTAGGGCGCATCACCGAGAAGAGCATTGCGGGTGATGAGCAGGCGTGGGAGCGCTACGAGTATAACGTTCAGGGCCA
GCTTATCGGGGCGGTGAACCCGGCGGTGACGGTGACGCGGCGCTATAATCAGGACGGCCAGTTAGCGCAGGAAATTCAGC
AGCAACCGCAGGTCAGTGCGACGGTGGAATATGGCTATAATGCCGCCGGTCAGCAGGTTGAGCAGCGCCATCTGTTGCAA
TATGCCGATGAGGACGACATTCAGGTACAGCAACGGATCCGCTACGGCTACGATGTGCTGGGGCAGTGCATCAGCCAGCA
GATCGATGATCACAGGCCGATGGCGTTCAGCTACGACAAGATTGGCCGGTTAACCGAACAACGGCTAACGCCGAGCCTGT
CGCACCATCTCAGTTACAGCGCTGCCGGGCAACTGGCGGGTTACCAGACACGGCGCAAGGGCATGGTCTGGAGTGAAACC
GACTACTTCTATGATCAGCACGGCAATCTGACGCAGCGGGAGGACAGCCGGCAGGGCAGTGAGCGTTATCACTACGATGT
GCTGGGGCAGATTGTGGGCTATCAGGATCCGCTGGGGACGCTGCATCGCTACCGTTATGATGCCTGCGGTGACCGGTTCA
GCACGGTGGCTGACAATGCGGAGGGCCGGCACACGCAGCACGATAATGGCACCGCCTACCAGCTCGACAAGGCGGGGCAG
TTGGTATCGCGCACCGACCGGTTTAGCCAGTTAGCCCTGCGCTGGAATACTTTTGGTCGGCTGGCCGGCATCAAAAATGA
GCACCATGATCACGCTTATACCTACGATGCGCTGGGGCGCCGGGTGGGCAAACGGCACCTTCAACGGCCGACCAAACTGC
TTGATGGGCTGCGGGTGATCGACAAAGAGACCCCCTCGCGCGGTGAACCGGTGTGGCAGGATGAAACCTGGTTTATGTGG
GACGGTGACGTGATGGTGGGCGAGTTGCAGCGTGAAGTTGCCCCCCGGGTGGTGACGCCTGAAACCTGGGACAAACCGGA
TGGTATCGTCTACAGCGGCCAGTTTTACGTGTATCAGCCAGACAGCTTCGAACCCCGCGCCATGCAGCGTTATCAACAGG
TTGCGGAAGCTGAAGACGGCGAAATCGCGCCATTAGGCGAAGAGCAGATTTATTTCTACCAGAATGACCCGAACGGTATG
CCGATCCGCCTGCAGGATGGCGAAGGCGAAGTGGTGTGGGAAGCACAGTTCACCCCGTTCGGGCAACTGAGTGTCACGGG
TACCAGCCAGCTCCGCCAGCCGCTGCGCATGCAGGGCCAATATTACGACACGGAAAGCGGTTTACATTATAACCGCTACC
GTTATTATGATCCGGCCTGCGGTGTGTTTATCAGCCAGGACCCGATAGGGTTAAAAGGCGGATTAAATCCGTACCAGTTT
GCAGTGAATACACTGGGATGGGTGGATCCGCTGGGGTTAGCTAAAAAAACGAATGAGGCTGGGGCATACTCTGAAGTAGG
TGGTCATCATGTTCATGCACAAGCTGGATTTAAAAATGAGCCTAATTACGATAAGGGTACCGCATTTGCTATTGGTCAGG
ATTACATGAAAGAAAAAGGTTTGGATCACCAATCTATGACCAATTCTCAACGGCAAGGATTTAAAGAATTAAATGAAAGT
GGTAGACCAAATACTTTGGCTGAACATGACAAAATTGCTAAAGATGCTTTAATAGCTGGGGGGGCAACAGAAGAAGAAGC
TAATGATTTAGTGAAAAAGTCCAAGGATAATTTGAAATGTCAAAATGTTTCTAAACCCAGCAATATCCCTTGGTATAGTT
AA

Upstream 100 bases:

>100_bases
CAGAACCATCCGCTGTGAATATGATCGGGAAGATAATCTACTGCTTTACAACGAGAACGGCTCACGTATCACCCGCTTTG
GCTATTTTGGTCAGGGCCGG

Downstream 100 bases:

>100_bases
TTTTTATGAGGATTTTTTAATGATTGAAAAAAAAGATTTTTTTGGGAAAGAACTGATGTATTCCGTTAGAGATCCTTCGA
TATCCAGATTTGAAGATATT

Product: YD repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 693; Mature: 693

Protein sequence:

>693_residues
MQSRTDPDGSLTEYLYDTEEQLIGVKNQRGKTWQLKRNAEGRLIEEVDYWGQSRGYQYNAVGHLTGSHDPLGQILAVTCD
KLGRITEKSIAGDEQAWERYEYNVQGQLIGAVNPAVTVTRRYNQDGQLAQEIQQQPQVSATVEYGYNAAGQQVEQRHLLQ
YADEDDIQVQQRIRYGYDVLGQCISQQIDDHRPMAFSYDKIGRLTEQRLTPSLSHHLSYSAAGQLAGYQTRRKGMVWSET
DYFYDQHGNLTQREDSRQGSERYHYDVLGQIVGYQDPLGTLHRYRYDACGDRFSTVADNAEGRHTQHDNGTAYQLDKAGQ
LVSRTDRFSQLALRWNTFGRLAGIKNEHHDHAYTYDALGRRVGKRHLQRPTKLLDGLRVIDKETPSRGEPVWQDETWFMW
DGDVMVGELQREVAPRVVTPETWDKPDGIVYSGQFYVYQPDSFEPRAMQRYQQVAEAEDGEIAPLGEEQIYFYQNDPNGM
PIRLQDGEGEVVWEAQFTPFGQLSVTGTSQLRQPLRMQGQYYDTESGLHYNRYRYYDPACGVFISQDPIGLKGGLNPYQF
AVNTLGWVDPLGLAKKTNEAGAYSEVGGHHVHAQAGFKNEPNYDKGTAFAIGQDYMKEKGLDHQSMTNSQRQGFKELNES
GRPNTLAEHDKIAKDALIAGGATEEEANDLVKKSKDNLKCQNVSKPSNIPWYS

Sequences:

>Translated_693_residues
MQSRTDPDGSLTEYLYDTEEQLIGVKNQRGKTWQLKRNAEGRLIEEVDYWGQSRGYQYNAVGHLTGSHDPLGQILAVTCD
KLGRITEKSIAGDEQAWERYEYNVQGQLIGAVNPAVTVTRRYNQDGQLAQEIQQQPQVSATVEYGYNAAGQQVEQRHLLQ
YADEDDIQVQQRIRYGYDVLGQCISQQIDDHRPMAFSYDKIGRLTEQRLTPSLSHHLSYSAAGQLAGYQTRRKGMVWSET
DYFYDQHGNLTQREDSRQGSERYHYDVLGQIVGYQDPLGTLHRYRYDACGDRFSTVADNAEGRHTQHDNGTAYQLDKAGQ
LVSRTDRFSQLALRWNTFGRLAGIKNEHHDHAYTYDALGRRVGKRHLQRPTKLLDGLRVIDKETPSRGEPVWQDETWFMW
DGDVMVGELQREVAPRVVTPETWDKPDGIVYSGQFYVYQPDSFEPRAMQRYQQVAEAEDGEIAPLGEEQIYFYQNDPNGM
PIRLQDGEGEVVWEAQFTPFGQLSVTGTSQLRQPLRMQGQYYDTESGLHYNRYRYYDPACGVFISQDPIGLKGGLNPYQF
AVNTLGWVDPLGLAKKTNEAGAYSEVGGHHVHAQAGFKNEPNYDKGTAFAIGQDYMKEKGLDHQSMTNSQRQGFKELNES
GRPNTLAEHDKIAKDALIAGGATEEEANDLVKKSKDNLKCQNVSKPSNIPWYS
>Mature_693_residues
MQSRTDPDGSLTEYLYDTEEQLIGVKNQRGKTWQLKRNAEGRLIEEVDYWGQSRGYQYNAVGHLTGSHDPLGQILAVTCD
KLGRITEKSIAGDEQAWERYEYNVQGQLIGAVNPAVTVTRRYNQDGQLAQEIQQQPQVSATVEYGYNAAGQQVEQRHLLQ
YADEDDIQVQQRIRYGYDVLGQCISQQIDDHRPMAFSYDKIGRLTEQRLTPSLSHHLSYSAAGQLAGYQTRRKGMVWSET
DYFYDQHGNLTQREDSRQGSERYHYDVLGQIVGYQDPLGTLHRYRYDACGDRFSTVADNAEGRHTQHDNGTAYQLDKAGQ
LVSRTDRFSQLALRWNTFGRLAGIKNEHHDHAYTYDALGRRVGKRHLQRPTKLLDGLRVIDKETPSRGEPVWQDETWFMW
DGDVMVGELQREVAPRVVTPETWDKPDGIVYSGQFYVYQPDSFEPRAMQRYQQVAEAEDGEIAPLGEEQIYFYQNDPNGM
PIRLQDGEGEVVWEAQFTPFGQLSVTGTSQLRQPLRMQGQYYDTESGLHYNRYRYYDPACGVFISQDPIGLKGGLNPYQF
AVNTLGWVDPLGLAKKTNEAGAYSEVGGHHVHAQAGFKNEPNYDKGTAFAIGQDYMKEKGLDHQSMTNSQRQGFKELNES
GRPNTLAEHDKIAKDALIAGGATEEEANDLVKKSKDNLKCQNVSKPSNIPWYS

Specific function: Rhs elements have a nonessential function. They may play an important role in the natural ecology of the cell [H]

COG id: COG3209

COG function: function code M; Rhs family protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RHS family [H]

Homologues:

Organism=Escherichia coli, GI48994942, Length=651, Percent_Identity=26.2672811059908, Blast_Score=157, Evalue=2e-39,
Organism=Escherichia coli, GI1790020, Length=650, Percent_Identity=26.4615384615385, Blast_Score=157, Evalue=3e-39,
Organism=Escherichia coli, GI1786917, Length=653, Percent_Identity=26.1868300153139, Blast_Score=155, Evalue=1e-38,
Organism=Escherichia coli, GI1786706, Length=672, Percent_Identity=25.297619047619, Blast_Score=143, Evalue=5e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001826
- InterPro:   IPR022385
- InterPro:   IPR006530 [H]

Pfam domain/function: PF03527 RHS; PF05593 RHS_repeat [H]

EC number: NA

Molecular weight: Translated: 78817; Mature: 78817

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: PS00221 MIP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSRTDPDGSLTEYLYDTEEQLIGVKNQRGKTWQLKRNAEGRLIEEVDYWGQSRGYQYNA
CCCCCCCCCCHHHHHHCCHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCCEEEEE
VGHLTGSHDPLGQILAVTCDKLGRITEKSIAGDEQAWERYEYNVQGQLIGAVNPAVTVTR
EEECCCCCCHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHCCCCCEEEEECCCCCEEEEE
RYNQDGQLAQEIQQQPQVSATVEYGYNAAGQQVEQRHLLQYADEDDIQVQQRIRYGYDVL
ECCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
GQCISQQIDDHRPMAFSYDKIGRLTEQRLTPSLSHHLSYSAAGQLAGYQTRRKGMVWSET
HHHHHHHHHCCCCCEECHHHHHHHHHHHCCHHHHHHCCHHHHHHHHCHHHHHCCCEEECC
DYFYDQHGNLTQREDSRQGSERYHYDVLGQIVGYQDPLGTLHRYRYDACGDRFSTVADNA
CCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHCCC
EGRHTQHDNGTAYQLDKAGQLVSRTDRFSQLALRWNTFGRLAGIKNEHHDHAYTYDALGR
CCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHH
RVGKRHLQRPTKLLDGLRVIDKETPSRGEPVWQDETWFMWDGDVMVGELQREVAPRVVTP
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCC
ETWDKPDGIVYSGQFYVYQPDSFEPRAMQRYQQVAEAEDGEIAPLGEEQIYFYQNDPNGM
CCCCCCCCEEECCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCC
PIRLQDGEGEVVWEAQFTPFGQLSVTGTSQLRQPLRMQGQYYDTESGLHYNRYRYYDPAC
EEEEECCCCCEEEEEECCCCCCEEECCHHHHHHHHHHCCCEECCCCCCEECCEEEECCCC
GVFISQDPIGLKGGLNPYQFAVNTLGWVDPLGLAKKTNEAGAYSEVGGHHVHAQAGFKNE
CEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCEEEEEECCCCCC
PNYDKGTAFAIGQDYMKEKGLDHQSMTNSQRQGFKELNESGRPNTLAEHDKIAKDALIAG
CCCCCCCEEECCHHHHHHCCCCHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEC
GATEEEANDLVKKSKDNLKCQNVSKPSNIPWYS
CCCHHHHHHHHHHCCCCCEECCCCCCCCCCCCC
>Mature Secondary Structure
MQSRTDPDGSLTEYLYDTEEQLIGVKNQRGKTWQLKRNAEGRLIEEVDYWGQSRGYQYNA
CCCCCCCCCCHHHHHHCCHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCCEEEEE
VGHLTGSHDPLGQILAVTCDKLGRITEKSIAGDEQAWERYEYNVQGQLIGAVNPAVTVTR
EEECCCCCCHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHCCCCCEEEEECCCCCEEEEE
RYNQDGQLAQEIQQQPQVSATVEYGYNAAGQQVEQRHLLQYADEDDIQVQQRIRYGYDVL
ECCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
GQCISQQIDDHRPMAFSYDKIGRLTEQRLTPSLSHHLSYSAAGQLAGYQTRRKGMVWSET
HHHHHHHHHCCCCCEECHHHHHHHHHHHCCHHHHHHCCHHHHHHHHCHHHHHCCCEEECC
DYFYDQHGNLTQREDSRQGSERYHYDVLGQIVGYQDPLGTLHRYRYDACGDRFSTVADNA
CCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHCCC
EGRHTQHDNGTAYQLDKAGQLVSRTDRFSQLALRWNTFGRLAGIKNEHHDHAYTYDALGR
CCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHH
RVGKRHLQRPTKLLDGLRVIDKETPSRGEPVWQDETWFMWDGDVMVGELQREVAPRVVTP
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCC
ETWDKPDGIVYSGQFYVYQPDSFEPRAMQRYQQVAEAEDGEIAPLGEEQIYFYQNDPNGM
CCCCCCCCEEECCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCC
PIRLQDGEGEVVWEAQFTPFGQLSVTGTSQLRQPLRMQGQYYDTESGLHYNRYRYYDPAC
EEEEECCCCCEEEEEECCCCCCEEECCHHHHHHHHHHCCCEECCCCCCEECCEEEECCCC
GVFISQDPIGLKGGLNPYQFAVNTLGWVDPLGLAKKTNEAGAYSEVGGHHVHAQAGFKNE
CEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCEEEEEECCCCCC
PNYDKGTAFAIGQDYMKEKGLDHQSMTNSQRQGFKELNESGRPNTLAEHDKIAKDALIAG
CCCCCCCEEECCHHHHHHCCCCHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEC
GATEEEANDLVKKSKDNLKCQNVSKPSNIPWYS
CCCHHHHHHHHHHCCCCCEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8387990; 8041620; 9278503; 2644231; 2403547; 7934896 [H]