Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

Click here to switch to the map view.

The map label for this gene is 169630805

Identifier: 169630805

GI number: 169630805

Start: 3782608

End: 3782898

Strand: Direct

Name: 169630805

Synonym: MAB_3726

Alternate gene names: NA

Gene position: 3782608-3782898 (Clockwise)

Preceding gene: 169630801

Following gene: 169630823

Centisome position: 74.65

GC content: 63.57

Gene sequence:

>291_bases
ATGCCGCAGCCACAGCAATTGCCTGGGCCCAACGCAGATATTTGGGATTGGCAGATGAAGGGTGTTTGCCGAGGAGTCGA
TTCGTCGGTGTTCTTCCATCCCGACGGTGAACGCGGCCGCGCCCGCGCACAGCGTGAGATGAAGGCCAAGGAGATGTGCC
GGGCCTGCCCGGTGCTGGTGCAGTGCCGCGCACACGCACTGGCTGTCGCCGAGCCGTACGGAATCTGGGGCGGGCTCTCC
GAGTCTGAACGTGAACTGATTCTGCGCCGCGGAGTACGTCGTACCGCGTAA

Upstream 100 bases:

>100_bases
CGCGCACCTACGTTGTTTACACCGCTTGTCATTGGCGACACGTCTGGTGCTACTTACTCACGCGCAGGTCGACTGCGCGC
GCAGCGAGAGGGTTAACCAC

Downstream 100 bases:

>100_bases
TACGCATAGCAATGCGTCGGGCCCCCGCACCCAACCGGTGACCGGGGGCTCGACGTTTGCGGGGGCCTTTATGTGCTGGT
GCTGGCCGGTTGGTCGTCGA

Product: WhiB family transcriptional regulator

Products: NA

Alternate protein names: WhiB Family Transcriptional Regulator; WhiB Family Regulatory Protein; WhiB-Family Transcriptional Regulator; Regulatory Protein; Transcriptional Regulator; Whib-Like Transcriptional Regulator; WhiB Family Transcriptional Factor; Whib Family Transcriptional Regulator; Transcriptional Regulator WhiB; Transcriptional Regulator WhiD; WhiB Protein; WhiB Transcriptional Regulator

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MPQPQQLPGPNADIWDWQMKGVCRGVDSSVFFHPDGERGRARAQREMKAKEMCRACPVLVQCRAHALAVAEPYGIWGGLS
ESERELILRRGVRRTA

Sequences:

>Translated_96_residues
MPQPQQLPGPNADIWDWQMKGVCRGVDSSVFFHPDGERGRARAQREMKAKEMCRACPVLVQCRAHALAVAEPYGIWGGLS
ESERELILRRGVRRTA
>Mature_95_residues
PQPQQLPGPNADIWDWQMKGVCRGVDSSVFFHPDGERGRARAQREMKAKEMCRACPVLVQCRAHALAVAEPYGIWGGLSE
SERELILRRGVRRTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10818; Mature: 10686

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQPQQLPGPNADIWDWQMKGVCRGVDSSVFFHPDGERGRARAQREMKAKEMCRACPVLV
CCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
QCRAHALAVAEPYGIWGGLSESERELILRRGVRRTA
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PQPQQLPGPNADIWDWQMKGVCRGVDSSVFFHPDGERGRARAQREMKAKEMCRACPVLV
CCCCCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
QCRAHALAVAEPYGIWGGLSESERELILRRGVRRTA
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA