| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630823
Identifier: 169630823
GI number: 169630823
Start: 3798907
End: 3799773
Strand: Direct
Name: 169630823
Synonym: MAB_3744
Alternate gene names: NA
Gene position: 3798907-3799773 (Clockwise)
Preceding gene: 169630805
Following gene: 169630827
Centisome position: 74.97
GC content: 67.82
Gene sequence:
>867_bases ATGGCGAGTACCCGCACGCTATTCAAAGCCCTGACCCGCCGTGGTCCGCACAAAGTGCTGCGCGGCGACCTGGCCTTCGC GGGAGTGACCGGCGTGGTCTACACACCGGAAGCGGGCTTCAACCTGCCTGCCGTGGCGTTTGGGCACGACTGGCTGACCG GTACGGACAAGTACCGGGCGACCCTGGAACATCTCGCGTCCTGGGGAATTGTCGCCGCCGCCCCCGACACCGAGAAGGGG TTGGTCCCGTCACACCTGAATCTGGCCGCCGACTTGGCCACAACGCTCGAGATTGTGACTCGGGTGCGCCTCGGCGACGG CAAGATCAGTGTGCATCCAAGCAAGCTGGCGCTCGTCGGCCACGGTCTGGGTGCCTCCGCGGCGGTTTTTGCGGCGACTC GCACGCCGGCCTTGGTGGACAAGAAGAACCGGCCGGTCGGCGCCAAGGCCGTGGTGACGCTTTTCCCCAGCTCGACTCAG CCGCCGGTTGAGGCCAGTGCGGTCGGCTTGACCATTCCCGGCCTGGTGGTGACGAGTGCCGAAGACGCACATTCACTCCG GTCCAATGCCGTGGCCCTCGCGCAGGCCTGGCCGGGCGCCGAGCTGCGGTACATCGCCAAGGCCAAGGCCGGGGGGCTGC CCGAGCACAGTTGGCTCCGCAGATTCGTCGGCCTGGGCGGTGCCAGCCGAACCACCCAGCGCAACACCAGGGCGCTGTTG ACCGGCTACCTGCTGTCCCAGCTGGTCGGCGACAAGCGCTACCGGGATTTCGCGGACGCGGCGGCCGAACTGCCGAACAC CTCGCTGCCGGCGGCCGACGGACGAGAGATCAGCGAGCTCGACCGCGTGCAATCGCTGCTGAAGTAG
Upstream 100 bases:
>100_bases TCCCGGTGGCCGACGTACCCGACAATTCCGCACATAGCCCACCAGGGTAGTTCAGTTCCCGCTGAGGTCCACGGGCGCCG GTATCAGCTACGGTCATGCC
Downstream 100 bases:
>100_bases TCAGCGCCGCCACCGCTGCCAGCGGTAGACATCGTCCTCATCGAAATCCGCTTCGCTCATGTAGGTCTGTGACGGCATGC GAAATTCGTCGACCGGCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MASTRTLFKALTRRGPHKVLRGDLAFAGVTGVVYTPEAGFNLPAVAFGHDWLTGTDKYRATLEHLASWGIVAAAPDTEKG LVPSHLNLAADLATTLEIVTRVRLGDGKISVHPSKLALVGHGLGASAAVFAATRTPALVDKKNRPVGAKAVVTLFPSSTQ PPVEASAVGLTIPGLVVTSAEDAHSLRSNAVALAQAWPGAELRYIAKAKAGGLPEHSWLRRFVGLGGASRTTQRNTRALL TGYLLSQLVGDKRYRDFADAAAELPNTSLPAADGREISELDRVQSLLK
Sequences:
>Translated_288_residues MASTRTLFKALTRRGPHKVLRGDLAFAGVTGVVYTPEAGFNLPAVAFGHDWLTGTDKYRATLEHLASWGIVAAAPDTEKG LVPSHLNLAADLATTLEIVTRVRLGDGKISVHPSKLALVGHGLGASAAVFAATRTPALVDKKNRPVGAKAVVTLFPSSTQ PPVEASAVGLTIPGLVVTSAEDAHSLRSNAVALAQAWPGAELRYIAKAKAGGLPEHSWLRRFVGLGGASRTTQRNTRALL TGYLLSQLVGDKRYRDFADAAAELPNTSLPAADGREISELDRVQSLLK >Mature_287_residues ASTRTLFKALTRRGPHKVLRGDLAFAGVTGVVYTPEAGFNLPAVAFGHDWLTGTDKYRATLEHLASWGIVAAAPDTEKGL VPSHLNLAADLATTLEIVTRVRLGDGKISVHPSKLALVGHGLGASAAVFAATRTPALVDKKNRPVGAKAVVTLFPSSTQP PVEASAVGLTIPGLVVTSAEDAHSLRSNAVALAQAWPGAELRYIAKAKAGGLPEHSWLRRFVGLGGASRTTQRNTRALLT GYLLSQLVGDKRYRDFADAAAELPNTSLPAADGREISELDRVQSLLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30319; Mature: 30188
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASTRTLFKALTRRGPHKVLRGDLAFAGVTGVVYTPEAGFNLPAVAFGHDWLTGTDKYRA CCCHHHHHHHHHCCCCHHHHHCCHHEECCCEEEECCCCCCCCCEEEECCCCCCCCHHHHH TLEHLASWGIVAAAPDTEKGLVPSHLNLAADLATTLEIVTRVRLGDGKISVHPSKLALVG HHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCEEEECCCEEEEEE HGLGASAAVFAATRTPALVDKKNRPVGAKAVVTLFPSSTQPPVEASAVGLTIPGLVVTSA CCCCCCHHEEEECCCCHHCCCCCCCCCCEEEEEECCCCCCCCCCCCEECEEECCEEEECC EDAHSLRSNAVALAQAWPGAELRYIAKAKAGGLPEHSWLRRFVGLGGASRTTQRNTRALL HHHHHHHHCCEEEEECCCCCCEEEEEHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHH TGYLLSQLVGDKRYRDFADAAAELPNTSLPAADGREISELDRVQSLLK HHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHC >Mature Secondary Structure ASTRTLFKALTRRGPHKVLRGDLAFAGVTGVVYTPEAGFNLPAVAFGHDWLTGTDKYRA CCHHHHHHHHHCCCCHHHHHCCHHEECCCEEEECCCCCCCCCEEEECCCCCCCCHHHHH TLEHLASWGIVAAAPDTEKGLVPSHLNLAADLATTLEIVTRVRLGDGKISVHPSKLALVG HHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCEEEECCCEEEEEE HGLGASAAVFAATRTPALVDKKNRPVGAKAVVTLFPSSTQPPVEASAVGLTIPGLVVTSA CCCCCCHHEEEECCCCHHCCCCCCCCCCEEEEEECCCCCCCCCCCCEECEEECCEEEECC EDAHSLRSNAVALAQAWPGAELRYIAKAKAGGLPEHSWLRRFVGLGGASRTTQRNTRALL HHHHHHHHCCEEEEECCCCCCEEEEEHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHH TGYLLSQLVGDKRYRDFADAAAELPNTSLPAADGREISELDRVQSLLK HHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA