Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

Click here to switch to the map view.

The map label for this gene is 169630801

Identifier: 169630801

GI number: 169630801

Start: 3778963

End: 3779367

Strand: Direct

Name: 169630801

Synonym: MAB_3722

Alternate gene names: NA

Gene position: 3778963-3779367 (Clockwise)

Preceding gene: 169630796

Following gene: 169630805

Centisome position: 74.58

GC content: 65.68

Gene sequence:

>405_bases
GTGCGCGACCACTTTCCGCCGGGACTGCCACCGGACCCGTTCGCCGATGACCCCCACGATCCATCGGCCGCGCTCGATGC
TATCGAGCCGGGTCAGCCGCTCGACCCGCAGGAGCGGATCGCGGTCGAAGAGGATCTCGCCGACCTCGCGGTCTATGAGG
CACTGCTGGCCCACAAGGGAATCCGCGGCCTCGTGGTTTGCTGTGATGAATGCCAGCAGGATCACTACCACGACTGGGAC
ATGCTGCGCGCGAATCTGCTGCAGCTGCTGGTCGACGGTACGGTCCGACCGCATGAGCCGGCCTTCGATCCCGAGCCAGA
GGCCTACGTGACCTGGGATTATTGCCGTGGCTATGCCGATGCCTCCCTCAACGAGGCGGCAACCGACCGCGACGGATTCC
GCTGA

Upstream 100 bases:

>100_bases
CATCCTATCGGCTCGCTGAGACTCCGATCGCCCGGATATGTGCTGGGACATGCCCCACGTGAGCTGGCGCGTGAACCGGC
GAACTGCGTACTCTAAGAGT

Downstream 100 bases:

>100_bases
TTCCTCGTTTGATCTAGGCCTCTACGCCTACTCGTCGGTGTGCGAACCCGATCCGCTGCCCTGATTCGCCGACCCACTCC
CCGGGTTGGCCGGTGCGACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MRDHFPPGLPPDPFADDPHDPSAALDAIEPGQPLDPQERIAVEEDLADLAVYEALLAHKGIRGLVVCCDECQQDHYHDWD
MLRANLLQLLVDGTVRPHEPAFDPEPEAYVTWDYCRGYADASLNEAATDRDGFR

Sequences:

>Translated_134_residues
MRDHFPPGLPPDPFADDPHDPSAALDAIEPGQPLDPQERIAVEEDLADLAVYEALLAHKGIRGLVVCCDECQQDHYHDWD
MLRANLLQLLVDGTVRPHEPAFDPEPEAYVTWDYCRGYADASLNEAATDRDGFR
>Mature_134_residues
MRDHFPPGLPPDPFADDPHDPSAALDAIEPGQPLDPQERIAVEEDLADLAVYEALLAHKGIRGLVVCCDECQQDHYHDWD
MLRANLLQLLVDGTVRPHEPAFDPEPEAYVTWDYCRGYADASLNEAATDRDGFR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv3412 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15009; Mature: 15009

Theoretical pI: Translated: 4.01; Mature: 4.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDHFPPGLPPDPFADDPHDPSAALDAIEPGQPLDPQERIAVEEDLADLAVYEALLAHKG
CCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
IRGLVVCCDECQQDHYHDWDMLRANLLQLLVDGTVRPHEPAFDPEPEAYVTWDYCRGYAD
CCCEEHCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHCCCCC
ASLNEAATDRDGFR
CCCCHHCCCCCCCC
>Mature Secondary Structure
MRDHFPPGLPPDPFADDPHDPSAALDAIEPGQPLDPQERIAVEEDLADLAVYEALLAHKG
CCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
IRGLVVCCDECQQDHYHDWDMLRANLLQLLVDGTVRPHEPAFDPEPEAYVTWDYCRGYAD
CCCEEHCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHCCCCC
ASLNEAATDRDGFR
CCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]