| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630314
Identifier: 169630314
GI number: 169630314
Start: 3266846
End: 3269032
Strand: Direct
Name: 169630314
Synonym: MAB_3233
Alternate gene names: NA
Gene position: 3266846-3269032 (Clockwise)
Preceding gene: 169630312
Following gene: 169630315
Centisome position: 64.47
GC content: 64.11
Gene sequence:
>2187_bases ATGAGCCGCACGCCCGAAAACAGTCCGACGACGGTCGACAACCTGCAAGCCCTGTCGGTCACCGATCTCCTGGCGGCCCG CGACCTCTATCACCACCACCTCACCAACAAACCCAACGTGGTAGGGACGGCTATCGGTCGCTATCTGATTCGTGAGCAAC CCGGCGGCGCGCGCACACTCGTCAATTCGCGGGTGGAGCAGGGATTTTCCTGGCCATGCGTCATGGTCTTCATCAGCGAC TGGGCGGCGCCCAAGTCGCTGACCCCGTACGACTATGTGCCCAAGCAACTGTTCATGCCCGACGGGCGCGTGGTCCCGGT GTGCAAGGTGCAAGTGGATCCGGCGCCCGTGTCCACCACCACCCCGCGGCACCCGGCCCCGGCGCGCTGGCCCACCACAC TGCTGGGCGGCGGCCTGCCCGTCGTCGTCGATGTCCAGAACCAGTCGCACACCGCGACCGCGGGCTGCCTGGTCTCCGAC GGCCACTCGCTGTACGCACTGACCAACCGGCACGTGTGCGGGCCCGCGGGGCAAGAGATCGACATGGTGCGAGGTCTGGC CCGCTCCCGGATCGGCGTATCCAGCGGACAACAGCTCACCAGGCTGCCTTTCGGCGAGGTGTACCCCTTCTCGATGACGA ACACCTACCTCACGCTGGACATCGGACTCGTCGACGTCGATGACGCTGGGGACTGGACCTCTACCGCCTACGGCATCGGC GATATCGGCCCGATGGTCGACACCGGCGACATGACCAACGGGCTGGATTTGATCGGCCAGCCCGTGGTGGCACATGGCGC AAGCTCCGGCCTGGTGGGGGGCAAGGTCATGGCGCTGTTCTATCGATACAAGTCGGTGGGCGGTTCGGAGTATGTGTCGG ACTTTCTCATCGCCCCGGATCCACAAGGGCCACAAACGGTTCCCGGCGACTCCGGGATGGTCTGGCACCTCACCGAGAAC CGTGCGCGACCCGCGCCGCTGGCCGTGGAATGGGGTGGGCAGGCCTTTCTGGACGACGCCACCCGGTGCACGCTGAATTT TGCGCTCGCAACGAGCCTGAGCACGGTGTGCAATCTCCTCGACGTGGAACCTGTCGTCGGGCAACAAGATGGCGCCCAGC CGTTTTGGGGACAGACCGGGCACTACAGCATTGCAACCTTCACTCTCGATGCCATCCGCTCACCGAATCTGAAGACGCTG ATGCAGGCCAATCTGGACGCCATCAGCTTCTCGCTGTCCGAGTTGGACCCCAAATCCATCGCCCAGCGCCTCAAGGAGGC CCGCAGCAACCCGGACGGCATCATTCCGCTGGCCGACGTGCCGGATCTGGTCTGGAAGAACCTGCCAAACAAGGTGGTGG GCGGCCGCGACGATCACATGGTCGGATATCGCTCACAGGGCCCCGAGCACCCATGCCACTACGCCGATATCGACGAACCC GGGCCCGACGGCTCGATCGTGCGAGACCTGTGTCTGCAGGACATCGCCAATCTCACGGTGACCAAATGGCAGCAGTTCTA CGACGAGCGCGGACACCGCACGCCGGACAAACGCGGCCTGCTGCCATTCCGGGTGTGGCAGTTCTACGACGCGATGGTTG GCTTCGCCAAAAGTAGGCAGGTCGACCAGTTCGTTTGTGCGGCGGGTCTATTGGCGCACTACGTGGGCGACGCCTCGCAA CCGCTGCACGGCAGTTACCTGGCAGACGGATATCCGGACGGAACGGGAGCCGGTGTCCACTCGTGCTACGAGTCAAAGAT GATCGACCGATACGCCCGGCAGTTGGTGGCCGCCATACCGGCGGACCTCGCCACGCTGGGCGATCTGGAGCTGATAGACG ATGGCCAGCACGCGGCACTGGCGACCGTCGAACTCATGGACCGATCGGCCCAGCGGTTGCCGCCGACTCAGCTGGTGGAC GCCTTCGTGGCGTTGGGAGGCAAACCCGTGGTCGCAACCCAAGACGGGTTGTGGTCCCGGTTTGGTGAGCAAACGGGGCT CCTGATGGCCGACAGCGCCCGCACACTTGCCATGATCTGGGATAGCGCATGGGCAGCCGGCAGTGGGGACAAGATCAAAA AGTCTGCGCTGCAAGCTATTCCACATGATCGACTGCGAGAGCTGTATCAACAGCGGCAGTTCGTGGAATCGCTGGACCTG GATCATGTGGAAACCGCCCTGCGCTAG
Upstream 100 bases:
>100_bases CTGCAGTCCGCTTATGTTCCCAAGGCATTCCCAGCTGCGATTCATCCTGTGTTTACCCGATGCGCACCGCCCTCTGGTTC GCAGACGCTACGAATCAAGG
Downstream 100 bases:
>100_bases TGTCGGATCCGATGTCCACTCTGCGAATCCGTGCCCTGGCGGTGCTCAGCGTCCTGTTCTTGTCCACACTCCCTGTCGGC GTCGCCCGTGCGGACATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 728; Mature: 727
Protein sequence:
>728_residues MSRTPENSPTTVDNLQALSVTDLLAARDLYHHHLTNKPNVVGTAIGRYLIREQPGGARTLVNSRVEQGFSWPCVMVFISD WAAPKSLTPYDYVPKQLFMPDGRVVPVCKVQVDPAPVSTTTPRHPAPARWPTTLLGGGLPVVVDVQNQSHTATAGCLVSD GHSLYALTNRHVCGPAGQEIDMVRGLARSRIGVSSGQQLTRLPFGEVYPFSMTNTYLTLDIGLVDVDDAGDWTSTAYGIG DIGPMVDTGDMTNGLDLIGQPVVAHGASSGLVGGKVMALFYRYKSVGGSEYVSDFLIAPDPQGPQTVPGDSGMVWHLTEN RARPAPLAVEWGGQAFLDDATRCTLNFALATSLSTVCNLLDVEPVVGQQDGAQPFWGQTGHYSIATFTLDAIRSPNLKTL MQANLDAISFSLSELDPKSIAQRLKEARSNPDGIIPLADVPDLVWKNLPNKVVGGRDDHMVGYRSQGPEHPCHYADIDEP GPDGSIVRDLCLQDIANLTVTKWQQFYDERGHRTPDKRGLLPFRVWQFYDAMVGFAKSRQVDQFVCAAGLLAHYVGDASQ PLHGSYLADGYPDGTGAGVHSCYESKMIDRYARQLVAAIPADLATLGDLELIDDGQHAALATVELMDRSAQRLPPTQLVD AFVALGGKPVVATQDGLWSRFGEQTGLLMADSARTLAMIWDSAWAAGSGDKIKKSALQAIPHDRLRELYQQRQFVESLDL DHVETALR
Sequences:
>Translated_728_residues MSRTPENSPTTVDNLQALSVTDLLAARDLYHHHLTNKPNVVGTAIGRYLIREQPGGARTLVNSRVEQGFSWPCVMVFISD WAAPKSLTPYDYVPKQLFMPDGRVVPVCKVQVDPAPVSTTTPRHPAPARWPTTLLGGGLPVVVDVQNQSHTATAGCLVSD GHSLYALTNRHVCGPAGQEIDMVRGLARSRIGVSSGQQLTRLPFGEVYPFSMTNTYLTLDIGLVDVDDAGDWTSTAYGIG DIGPMVDTGDMTNGLDLIGQPVVAHGASSGLVGGKVMALFYRYKSVGGSEYVSDFLIAPDPQGPQTVPGDSGMVWHLTEN RARPAPLAVEWGGQAFLDDATRCTLNFALATSLSTVCNLLDVEPVVGQQDGAQPFWGQTGHYSIATFTLDAIRSPNLKTL MQANLDAISFSLSELDPKSIAQRLKEARSNPDGIIPLADVPDLVWKNLPNKVVGGRDDHMVGYRSQGPEHPCHYADIDEP GPDGSIVRDLCLQDIANLTVTKWQQFYDERGHRTPDKRGLLPFRVWQFYDAMVGFAKSRQVDQFVCAAGLLAHYVGDASQ PLHGSYLADGYPDGTGAGVHSCYESKMIDRYARQLVAAIPADLATLGDLELIDDGQHAALATVELMDRSAQRLPPTQLVD AFVALGGKPVVATQDGLWSRFGEQTGLLMADSARTLAMIWDSAWAAGSGDKIKKSALQAIPHDRLRELYQQRQFVESLDL DHVETALR >Mature_727_residues SRTPENSPTTVDNLQALSVTDLLAARDLYHHHLTNKPNVVGTAIGRYLIREQPGGARTLVNSRVEQGFSWPCVMVFISDW AAPKSLTPYDYVPKQLFMPDGRVVPVCKVQVDPAPVSTTTPRHPAPARWPTTLLGGGLPVVVDVQNQSHTATAGCLVSDG HSLYALTNRHVCGPAGQEIDMVRGLARSRIGVSSGQQLTRLPFGEVYPFSMTNTYLTLDIGLVDVDDAGDWTSTAYGIGD IGPMVDTGDMTNGLDLIGQPVVAHGASSGLVGGKVMALFYRYKSVGGSEYVSDFLIAPDPQGPQTVPGDSGMVWHLTENR ARPAPLAVEWGGQAFLDDATRCTLNFALATSLSTVCNLLDVEPVVGQQDGAQPFWGQTGHYSIATFTLDAIRSPNLKTLM QANLDAISFSLSELDPKSIAQRLKEARSNPDGIIPLADVPDLVWKNLPNKVVGGRDDHMVGYRSQGPEHPCHYADIDEPG PDGSIVRDLCLQDIANLTVTKWQQFYDERGHRTPDKRGLLPFRVWQFYDAMVGFAKSRQVDQFVCAAGLLAHYVGDASQP LHGSYLADGYPDGTGAGVHSCYESKMIDRYARQLVAAIPADLATLGDLELIDDGQHAALATVELMDRSAQRLPPTQLVDA FVALGGKPVVATQDGLWSRFGEQTGLLMADSARTLAMIWDSAWAAGSGDKIKKSALQAIPHDRLRELYQQRQFVESLDLD HVETALR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 78917; Mature: 78786
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRTPENSPTTVDNLQALSVTDLLAARDLYHHHLTNKPNVVGTAIGRYLIREQPGGARTL CCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHH VNSRVEQGFSWPCVMVFISDWAAPKSLTPYDYVPKQLFMPDGRVVPVCKVQVDPAPVSTT HHHHHHCCCCCCEEEEEECCCCCCCCCCCHHCCCHHHCCCCCCEEEEEEEEECCCCCCCC TPRHPAPARWPTTLLGGGLPVVVDVQNQSHTATAGCLVSDGHSLYALTNRHVCGPAGQEI CCCCCCCCCCCHHHHCCCCEEEEEECCCCCCCEECEEEECCCEEEEEECCCCCCCCCCHH DMVRGLARSRIGVSSGQQLTRLPFGEVYPFSMTNTYLTLDIGLVDVDDAGDWTSTAYGIG HHHHHHHHHHCCCCCCCCEECCCCCCCCCEEECCEEEEEEEEEEEECCCCCCCCCCCCCC DIGPMVDTGDMTNGLDLIGQPVVAHGASSGLVGGKVMALFYRYKSVGGSEYVSDFLIAPD CCCCCCCCCCCCCCHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCEECCC PQGPQTVPGDSGMVWHLTENRARPAPLAVEWGGQAFLDDATRCTLNFALATSLSTVCNLL CCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCHHCCCHHHEEHHHHHHHHHHHHHHH DVEPVVGQQDGAQPFWGQTGHYSIATFTLDAIRSPNLKTLMQANLDAISFSLSELDPKSI CCCCCCCCCCCCCCCCCCCCCEEEEEEEEHHHCCCCHHHHHHCCCHHHHHHHHHCCHHHH AQRLKEARSNPDGIIPLADVPDLVWKNLPNKVVGGRDDHMVGYRSQGPEHPCHYADIDEP HHHHHHHHCCCCCEEECCCCCHHHHHCCCCHHCCCCCCCEECCCCCCCCCCCCCCCCCCC GPDGSIVRDLCLQDIANLTVTKWQQFYDERGHRTPDKRGLLPFRVWQFYDAMVGFAKSRQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCH VDQFVCAAGLLAHYVGDASQPLHGSYLADGYPDGTGAGVHSCYESKMIDRYARQLVAAIP HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC ADLATLGDLELIDDGQHAALATVELMDRSAQRLPPTQLVDAFVALGGKPVVATQDGLWSR HHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEECCHHHHH FGEQTGLLMADSARTLAMIWDSAWAAGSGDKIKKSALQAIPHDRLRELYQQRQFVESLDL HCCCCCEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCH DHVETALR HHHHHHCC >Mature Secondary Structure SRTPENSPTTVDNLQALSVTDLLAARDLYHHHLTNKPNVVGTAIGRYLIREQPGGARTL CCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHH VNSRVEQGFSWPCVMVFISDWAAPKSLTPYDYVPKQLFMPDGRVVPVCKVQVDPAPVSTT HHHHHHCCCCCCEEEEEECCCCCCCCCCCHHCCCHHHCCCCCCEEEEEEEEECCCCCCCC TPRHPAPARWPTTLLGGGLPVVVDVQNQSHTATAGCLVSDGHSLYALTNRHVCGPAGQEI CCCCCCCCCCCHHHHCCCCEEEEEECCCCCCCEECEEEECCCEEEEEECCCCCCCCCCHH DMVRGLARSRIGVSSGQQLTRLPFGEVYPFSMTNTYLTLDIGLVDVDDAGDWTSTAYGIG HHHHHHHHHHCCCCCCCCEECCCCCCCCCEEECCEEEEEEEEEEEECCCCCCCCCCCCCC DIGPMVDTGDMTNGLDLIGQPVVAHGASSGLVGGKVMALFYRYKSVGGSEYVSDFLIAPD CCCCCCCCCCCCCCHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCEECCC PQGPQTVPGDSGMVWHLTENRARPAPLAVEWGGQAFLDDATRCTLNFALATSLSTVCNLL CCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCHHCCCHHHEEHHHHHHHHHHHHHHH DVEPVVGQQDGAQPFWGQTGHYSIATFTLDAIRSPNLKTLMQANLDAISFSLSELDPKSI CCCCCCCCCCCCCCCCCCCCCEEEEEEEEHHHCCCCHHHHHHCCCHHHHHHHHHCCHHHH AQRLKEARSNPDGIIPLADVPDLVWKNLPNKVVGGRDDHMVGYRSQGPEHPCHYADIDEP HHHHHHHHCCCCCEEECCCCCHHHHHCCCCHHCCCCCCCEECCCCCCCCCCCCCCCCCCC GPDGSIVRDLCLQDIANLTVTKWQQFYDERGHRTPDKRGLLPFRVWQFYDAMVGFAKSRQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCH VDQFVCAAGLLAHYVGDASQPLHGSYLADGYPDGTGAGVHSCYESKMIDRYARQLVAAIP HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC ADLATLGDLELIDDGQHAALATVELMDRSAQRLPPTQLVDAFVALGGKPVVATQDGLWSR HHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEECCHHHHH FGEQTGLLMADSARTLAMIWDSAWAAGSGDKIKKSALQAIPHDRLRELYQQRQFVESLDL HCCCCCEEEECCCCEEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCH DHVETALR HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA