| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is cdsA [H]
Identifier: 169630268
GI number: 169630268
Start: 3230789
End: 3231667
Strand: Reverse
Name: cdsA [H]
Synonym: MAB_3186c
Alternate gene names: 169630268
Gene position: 3231667-3230789 (Counterclockwise)
Preceding gene: 169630269
Following gene: 169630265
Centisome position: 63.78
GC content: 64.39
Gene sequence:
>879_bases ATGGGAGACACCGACGCGGCTCCGGCCCCCGGCAGCAGCCCTGCGCCCCCTGCGGGGGCGAAGTCCCGGGCCGGGCGCAA CCTGCCGGCCGCAATTGGCGTCGGGGTTGCGCTCGCCGCCCTGATCATTTTCTCGTTGTTGTACCAGAAGGAGATCTGGG TCGGCATCATCTCGGTCTTCCTCGGGATCGCGATGTGGGAGGTGACCAAGCGGCTGCGCCAGGCCGATATCTCGGTTCCT TTCATCCCCTTGTTCTTCGGCGGGCAGGCCATGATCTGGTTGACGTGGCCGTGGGGGACCGCGGGATCGGTTGGTGCCTT CGCCGCGACCGTTGTGGTGTGCATGATTTGGCGGCTCTTGAGCCAGGGGCTGGGCAGTCAGCCGGTGAATTATCTGCGCG ATGTGGCGATCACGGTTTTCGTGGCCGCATGGATTCCGCTGTTCGCATCCTTCGGCGCGCTGCTGGTCTATCCGGACAAC GGCGCAGAGCAGGTTTTCTGCCTGATGCTCGGTGTCACCTTCTCCGATATCGGCGGATACGCGGCGGGGGTCTTGTTCGG TAAGCATCCGATGGCACCCGCGATCAGCCCGAAGAAATCCTGGGAGGGCCTGGCGGGCTCGCTCGTGGTGGGAACCACGG CGTCTACTCTGGCGGTGACGTTCCTGCTCGGACATCACCCGTTCGTGGGTATCGCGCTCGGCGTGATGCTTGTCATCACC GGCACACTGGGCGACCTCGTGGAGTCACAGGTCAAGCGCGACTTGGGGATCAAGGATATGGGCACGCTGCTGCCCGGTCA CGGCGGCATCATGGACCGCCTGGACTCGCTGCTGCCGTCGGCGGTCGCTACCTGGATTGTGCTGACGCTCTTCATCTAA
Upstream 100 bases:
>100_bases TGGACAAGACCACCGCGCAGTACGTGAGCCAGATCGATGAGCTGGTGAAACACAAAGAAGGCGAGCTACTGGAGGTCTAG GGCCGCCGGTAGTGACGACC
Downstream 100 bases:
>100_bases AGAGCGCGTAACTAGGCGTGGTTTGACGCCTCCGCGCTTCGGTACAGCACTGTTTGATAAATCCCGCTGACGGTTGCGCC ATAGAGGATCGCGGCCGCGA
Product: phosphatidate cytidylyltransferase (CdsA)
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MGDTDAAPAPGSSPAPPAGAKSRAGRNLPAAIGVGVALAALIIFSLLYQKEIWVGIISVFLGIAMWEVTKRLRQADISVP FIPLFFGGQAMIWLTWPWGTAGSVGAFAATVVVCMIWRLLSQGLGSQPVNYLRDVAITVFVAAWIPLFASFGALLVYPDN GAEQVFCLMLGVTFSDIGGYAAGVLFGKHPMAPAISPKKSWEGLAGSLVVGTTASTLAVTFLLGHHPFVGIALGVMLVIT GTLGDLVESQVKRDLGIKDMGTLLPGHGGIMDRLDSLLPSAVATWIVLTLFI
Sequences:
>Translated_292_residues MGDTDAAPAPGSSPAPPAGAKSRAGRNLPAAIGVGVALAALIIFSLLYQKEIWVGIISVFLGIAMWEVTKRLRQADISVP FIPLFFGGQAMIWLTWPWGTAGSVGAFAATVVVCMIWRLLSQGLGSQPVNYLRDVAITVFVAAWIPLFASFGALLVYPDN GAEQVFCLMLGVTFSDIGGYAAGVLFGKHPMAPAISPKKSWEGLAGSLVVGTTASTLAVTFLLGHHPFVGIALGVMLVIT GTLGDLVESQVKRDLGIKDMGTLLPGHGGIMDRLDSLLPSAVATWIVLTLFI >Mature_291_residues GDTDAAPAPGSSPAPPAGAKSRAGRNLPAAIGVGVALAALIIFSLLYQKEIWVGIISVFLGIAMWEVTKRLRQADISVPF IPLFFGGQAMIWLTWPWGTAGSVGAFAATVVVCMIWRLLSQGLGSQPVNYLRDVAITVFVAAWIPLFASFGALLVYPDNG AEQVFCLMLGVTFSDIGGYAAGVLFGKHPMAPAISPKKSWEGLAGSLVVGTTASTLAVTFLLGHHPFVGIALGVMLVITG TLGDLVESQVKRDLGIKDMGTLLPGHGGIMDRLDSLLPSAVATWIVLTLFI
Specific function: Phospholipid biosynthesis. [C]
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI87081696, Length=125, Percent_Identity=41.6, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1787677, Length=107, Percent_Identity=40.1869158878505, Blast_Score=83, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 30559; Mature: 30428
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: PS01315 CDS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDTDAAPAPGSSPAPPAGAKSRAGRNLPAAIGVGVALAALIIFSLLYQKEIWVGIISVF CCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGIAMWEVTKRLRQADISVPFIPLFFGGQAMIWLTWPWGTAGSVGAFAATVVVCMIWRLL HHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH SQGLGSQPVNYLRDVAITVFVAAWIPLFASFGALLVYPDNGAEQVFCLMLGVTFSDIGGY HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHH AAGVLFGKHPMAPAISPKKSWEGLAGSLVVGTTASTLAVTFLLGHHPFVGIALGVMLVIT HHHHHHCCCCCCCCCCCCHHHCCCCCCEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHH GTLGDLVESQVKRDLGIKDMGTLLPGHGGIMDRLDSLLPSAVATWIVLTLFI HHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure GDTDAAPAPGSSPAPPAGAKSRAGRNLPAAIGVGVALAALIIFSLLYQKEIWVGIISVF CCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGIAMWEVTKRLRQADISVPFIPLFFGGQAMIWLTWPWGTAGSVGAFAATVVVCMIWRLL HHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH SQGLGSQPVNYLRDVAITVFVAAWIPLFASFGALLVYPDNGAEQVFCLMLGVTFSDIGGY HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHHHH AAGVLFGKHPMAPAISPKKSWEGLAGSLVVGTTASTLAVTFLLGHHPFVGIALGVMLVIT HHHHHHCCCCCCCCCCCCHHHCCCCCCEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHH GTLGDLVESQVKRDLGIKDMGTLLPGHGGIMDRLDSLLPSAVATWIVLTLFI HHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]