| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169630022
Identifier: 169630022
GI number: 169630022
Start: 2994871
End: 2996112
Strand: Direct
Name: 169630022
Synonym: MAB_2939
Alternate gene names: NA
Gene position: 2994871-2996112 (Clockwise)
Preceding gene: 169630021
Following gene: 169630023
Centisome position: 59.1
GC content: 69.08
Gene sequence:
>1242_bases GTGGCAGCGGCATCCTCATCGAACCCAGTAGATGCCGGCAGCCCCGGCTGGCTGACTCCGATCGCGGAGTTGCTGACGGC CGCCGACGCCGAGCTCGCCACTGCCTATCCGGAGACGCGCGATGAACCGCAACCCATCCACACCGTGTACGTCAGCGCGG CCCTGGCCGACGTCGAGCTACCCGGGCAATGGGGAGCATCCGCACTGGCGCTGACCGCGCGTCACGAACCGTCGCTGGCG GCGCTCGACACCCAGGGCGTCCTGCCCCGCGTCAAGGAACGCCTTGCCGCCGACCCCATCCAGGATCTGCGGCTGGACTT CGAGGACGGCTACGGCTGGCGCGGAGACAGCACCGAGGACGCCGACGCCCGCAAGGCGGGACGCACGTTGCGCGCACTGT CGATAGCGGCGAATCCTCCTGCGATACTGGGCATCCGAATCAAGGGCCTCACCTCATTACACCTGCGGCGCAGCGTGCGC ACCCTGGAGCTGGTACTCGACGGCGCATCTGGGGTGCCACGGGGCTTCGTGACGACCATCCCGAAATTCCGCACCGTAAC CCAAGTCGAGGCGGCACTGCGACTCTTCGACGAGCTAGAGCGTGTGCACGGATTACCCAGCGGCTCACTGCGATTCGAGC TGCAGATCGAGAGTCCGCAAGCGGTGCTCGGTGCCGACGGCGCCGTCACCTTGGCCAAGGCAATCCATCTGGCCCAGGGG CGCCTGACCGCGTTGCATTACGGCACGTACGACTACAGCGCGGCCTGCGGGATCGCCGCCGAACAGCAGTCCCTGGAGCA TCCCGTGGCCGACCACGCCAAGGCGGTGATGCTCGCCGCCGCGGCTCAGACGGGTGTATGGGTGTGCGACGGCTCCACGC AGGTGAACCCCGAGGGCTCACCCGAGCAGCAGGCCGCGGCGCTCACCCGCCACCACCGGCTGGTCACCCGCGCACTCGAG CGCGGCTATTGGCAGGGGTGGGACATGCACCCGGGACATCTGGTGACCCGCTGGCTGGCCACCTACGGATTCCACCGGCG CGCGCTGGCGGTGGCCGGTCCGCGCATCCTCGCCTACCTGCAGCGCCAGGGTGGCGGTGTCGTCGACGAACCGGCGACGG CCCAAGCCCTGGCGACCGGGATCCTGCGTGGCCTGGACTGCGGCGCCTATACCGACAGCGCGCTACCGCCGGGATGCGAC CGGGCGGTACTGAATCAACTCGTGCAACGCACCCACAGCTGA
Upstream 100 bases:
>100_bases AAGGTTCTCGCTGGTCAACAGGTCGTGAACGAGCCCGAGGGGGAATCGGCAGCTGCACACCCCTGAGCACCGCACCCACG AGTCTGCGAACATGGGACCC
Downstream 100 bases:
>100_bases CGCTGCGACAGGAGGAACCGACCAGCGATGACCGGCAACGCACCCGCGGGGCTGCCCGACTTCACCATGCTTCCCGACTT GGCGCTGCGCCCCCTGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 413; Mature: 412
Protein sequence:
>413_residues MAAASSSNPVDAGSPGWLTPIAELLTAADAELATAYPETRDEPQPIHTVYVSAALADVELPGQWGASALALTARHEPSLA ALDTQGVLPRVKERLAADPIQDLRLDFEDGYGWRGDSTEDADARKAGRTLRALSIAANPPAILGIRIKGLTSLHLRRSVR TLELVLDGASGVPRGFVTTIPKFRTVTQVEAALRLFDELERVHGLPSGSLRFELQIESPQAVLGADGAVTLAKAIHLAQG RLTALHYGTYDYSAACGIAAEQQSLEHPVADHAKAVMLAAAAQTGVWVCDGSTQVNPEGSPEQQAAALTRHHRLVTRALE RGYWQGWDMHPGHLVTRWLATYGFHRRALAVAGPRILAYLQRQGGGVVDEPATAQALATGILRGLDCGAYTDSALPPGCD RAVLNQLVQRTHS
Sequences:
>Translated_413_residues MAAASSSNPVDAGSPGWLTPIAELLTAADAELATAYPETRDEPQPIHTVYVSAALADVELPGQWGASALALTARHEPSLA ALDTQGVLPRVKERLAADPIQDLRLDFEDGYGWRGDSTEDADARKAGRTLRALSIAANPPAILGIRIKGLTSLHLRRSVR TLELVLDGASGVPRGFVTTIPKFRTVTQVEAALRLFDELERVHGLPSGSLRFELQIESPQAVLGADGAVTLAKAIHLAQG RLTALHYGTYDYSAACGIAAEQQSLEHPVADHAKAVMLAAAAQTGVWVCDGSTQVNPEGSPEQQAAALTRHHRLVTRALE RGYWQGWDMHPGHLVTRWLATYGFHRRALAVAGPRILAYLQRQGGGVVDEPATAQALATGILRGLDCGAYTDSALPPGCD RAVLNQLVQRTHS >Mature_412_residues AAASSSNPVDAGSPGWLTPIAELLTAADAELATAYPETRDEPQPIHTVYVSAALADVELPGQWGASALALTARHEPSLAA LDTQGVLPRVKERLAADPIQDLRLDFEDGYGWRGDSTEDADARKAGRTLRALSIAANPPAILGIRIKGLTSLHLRRSVRT LELVLDGASGVPRGFVTTIPKFRTVTQVEAALRLFDELERVHGLPSGSLRFELQIESPQAVLGADGAVTLAKAIHLAQGR LTALHYGTYDYSAACGIAAEQQSLEHPVADHAKAVMLAAAAQTGVWVCDGSTQVNPEGSPEQQAAALTRHHRLVTRALER GYWQGWDMHPGHLVTRWLATYGFHRRALAVAGPRILAYLQRQGGGVVDEPATAQALATGILRGLDCGAYTDSALPPGCDR AVLNQLVQRTHS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44021; Mature: 43890
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAASSSNPVDAGSPGWLTPIAELLTAADAELATAYPETRDEPQPIHTVYVSAALADVEL CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCHHEEEEEHHHHCCCC PGQWGASALALTARHEPSLAALDTQGVLPRVKERLAADPIQDLRLDFEDGYGWRGDSTED CCCCCCCEEEEEECCCCCEEEECCCCCHHHHHHHHHCCCHHHHEEECCCCCCCCCCCCCC ADARKAGRTLRALSIAANPPAILGIRIKGLTSLHLRRSVRTLELVLDGASGVPRGFVTTI HHHHHHCCCEEEEEEECCCCEEEEEEECCHHHHHHHHHHHEEEEEEECCCCCCCCHHHHC PKFRTVTQVEAALRLFDELERVHGLPSGSLRFELQIESPQAVLGADGAVTLAKAIHLAQG CCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEECCCCHHHHHHHHHHHCC RLTALHYGTYDYSAACGIAAEQQSLEHPVADHAKAVMLAAAAQTGVWVCDGSTQVNPEGS CEEEEEECCCCCHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCC PEQQAAALTRHHRLVTRALERGYWQGWDMHPGHLVTRWLATYGFHRRALAVAGPRILAYL CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHCCHHHHHHH QRQGGGVVDEPATAQALATGILRGLDCGAYTDSALPPGCDRAVLNQLVQRTHS HHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure AAASSSNPVDAGSPGWLTPIAELLTAADAELATAYPETRDEPQPIHTVYVSAALADVEL CCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCHHEEEEEHHHHCCCC PGQWGASALALTARHEPSLAALDTQGVLPRVKERLAADPIQDLRLDFEDGYGWRGDSTED CCCCCCCEEEEEECCCCCEEEECCCCCHHHHHHHHHCCCHHHHEEECCCCCCCCCCCCCC ADARKAGRTLRALSIAANPPAILGIRIKGLTSLHLRRSVRTLELVLDGASGVPRGFVTTI HHHHHHCCCEEEEEEECCCCEEEEEEECCHHHHHHHHHHHEEEEEEECCCCCCCCHHHHC PKFRTVTQVEAALRLFDELERVHGLPSGSLRFELQIESPQAVLGADGAVTLAKAIHLAQG CCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEECCCCHHHHHHHHHHHCC RLTALHYGTYDYSAACGIAAEQQSLEHPVADHAKAVMLAAAAQTGVWVCDGSTQVNPEGS CEEEEEECCCCCHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCC PEQQAAALTRHHRLVTRALERGYWQGWDMHPGHLVTRWLATYGFHRRALAVAGPRILAYL CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHCCHHHHHHH QRQGGGVVDEPATAQALATGILRGLDCGAYTDSALPPGCDRAVLNQLVQRTHS HHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA