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The map label for this gene is alc [H]

Identifier: 169630023

GI number: 169630023

Start: 2996140

End: 2997156

Strand: Direct

Name: alc [H]

Synonym: MAB_2940

Alternate gene names: 169630023

Gene position: 2996140-2997156 (Clockwise)

Preceding gene: 169630022

Following gene: 169630024

Centisome position: 59.13

GC content: 66.86

Gene sequence:

>1017_bases
ATGACCGGCAACGCACCCGCGGGGCTGCCCGACTTCACCATGCTTCCCGACTTGGCGCTGCGCCCCCTGGGCGGGGCGGT
GATCTGGGCCAACGACGATCTGTTCGCCGAGAAGGAGAACCTGATCAAACCCGGGCCGGCCGACTACCGGCCCGCGACCT
TCGGGCACAAGGGACAGGTCTATGACGGATGGGAGACCCGGCGCAGGCGTGACCCGGCCGGCGATCCCGGCCATGACGCC
GCCATCGTGCGGCTGGGCGTCCCGGGGGTGATAGCGGGCGTCGTCGTCGACACCGCGTGGTTCAAGGGAAACTACCCGCC
CGAGATCTCGGTCGAGGCGACGGAAGTCGAGGGATACCCGCCGGCGGCAGAGATAGCTCGAGATGCCTTATGGCACACCA
TTGTCCAGCGCACCAAGGTCTATGGCGACAGCCGCAATCCCTTCGACGTCGATTCGCCGCGACGCTGGACTCACGTGCGG
TTGACCATGTATCCCGACGGCGGGGTGGCACGACTGCGTGTGCACGGCCATGGGCAGCCGGATCCACGGTTTCTGCAGGC
CGGACAGTTTGACCTGGCTGCCATCGAGAACGGCGGCCTGGTCACCGACTGCTCCAACCGGTTTTACAGCTCACCCCAGA
ATCTGCTGTTCCCTGGTGTCGCACGAGTCATGGGCGACGGATGGGAGACCGCCCGTCGCCGCGACGGCGCCAACGATTGG
GTACATGTGCGGCTCGCCGGGGAGGGCTTGATCAGACTCGCCGAAATCGACACCTCCTACTTTGTGGGAAACAGCCCCGG
GGCGTCAGCCCTGCAAGGACTAACCGCACAGGGCGATTGGGTACCGCTGCTAGCGCGAACCGCTCTGCAACCGGACACCC
GGCACCGCTTCTTGTTGGACGGCCAGCAGCCCGTCACCGACGTGCGGCTAGACATCTACCCCGACGGCGGGCTGGCGCGG
CTGCGCTTGTTCGGTGAGCTCACCGCGGCGGGGCGGGCCTCCCTCCAAGGGCATTGA

Upstream 100 bases:

>100_bases
TACCGACAGCGCGCTACCGCCGGGATGCGACCGGGCGGTACTGAATCAACTCGTGCAACGCACCCACAGCTGACGCTGCG
ACAGGAGGAACCGACCAGCG

Downstream 100 bases:

>100_bases
CGCCACCTACGCCGTCCCGCACCGAGGTTTCCGACTCCTGCCGTGTAAGGATCTTGTAAACCCGGCGCCCACTCGCTCGA
CGAAATCCCTTGCTATTCAG

Product: allantoicase

Products: NA

Alternate protein names: Allantoate amidinohydrolase [H]

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MTGNAPAGLPDFTMLPDLALRPLGGAVIWANDDLFAEKENLIKPGPADYRPATFGHKGQVYDGWETRRRRDPAGDPGHDA
AIVRLGVPGVIAGVVVDTAWFKGNYPPEISVEATEVEGYPPAAEIARDALWHTIVQRTKVYGDSRNPFDVDSPRRWTHVR
LTMYPDGGVARLRVHGHGQPDPRFLQAGQFDLAAIENGGLVTDCSNRFYSSPQNLLFPGVARVMGDGWETARRRDGANDW
VHVRLAGEGLIRLAEIDTSYFVGNSPGASALQGLTAQGDWVPLLARTALQPDTRHRFLLDGQQPVTDVRLDIYPDGGLAR
LRLFGELTAAGRASLQGH

Sequences:

>Translated_338_residues
MTGNAPAGLPDFTMLPDLALRPLGGAVIWANDDLFAEKENLIKPGPADYRPATFGHKGQVYDGWETRRRRDPAGDPGHDA
AIVRLGVPGVIAGVVVDTAWFKGNYPPEISVEATEVEGYPPAAEIARDALWHTIVQRTKVYGDSRNPFDVDSPRRWTHVR
LTMYPDGGVARLRVHGHGQPDPRFLQAGQFDLAAIENGGLVTDCSNRFYSSPQNLLFPGVARVMGDGWETARRRDGANDW
VHVRLAGEGLIRLAEIDTSYFVGNSPGASALQGLTAQGDWVPLLARTALQPDTRHRFLLDGQQPVTDVRLDIYPDGGLAR
LRLFGELTAAGRASLQGH
>Mature_337_residues
TGNAPAGLPDFTMLPDLALRPLGGAVIWANDDLFAEKENLIKPGPADYRPATFGHKGQVYDGWETRRRRDPAGDPGHDAA
IVRLGVPGVIAGVVVDTAWFKGNYPPEISVEATEVEGYPPAAEIARDALWHTIVQRTKVYGDSRNPFDVDSPRRWTHVRL
TMYPDGGVARLRVHGHGQPDPRFLQAGQFDLAAIENGGLVTDCSNRFYSSPQNLLFPGVARVMGDGWETARRRDGANDWV
HVRLAGEGLIRLAEIDTSYFVGNSPGASALQGLTAQGDWVPLLARTALQPDTRHRFLLDGQQPVTDVRLDIYPDGGLARL
RLFGELTAAGRASLQGH

Specific function: Unknown

COG id: COG4266

COG function: function code F; Allantoicase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the allantoicase family [H]

Homologues:

Organism=Homo sapiens, GI144953901, Length=369, Percent_Identity=37.1273712737127, Blast_Score=208, Evalue=5e-54,
Organism=Saccharomyces cerevisiae, GI6322220, Length=324, Percent_Identity=35.8024691358025, Blast_Score=189, Evalue=8e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005164
- InterPro:   IPR015908
- InterPro:   IPR008979 [H]

Pfam domain/function: PF03561 Allantoicase [H]

EC number: =3.5.3.4 [H]

Molecular weight: Translated: 36855; Mature: 36724

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGNAPAGLPDFTMLPDLALRPLGGAVIWANDDLFAEKENLIKPGPADYRPATFGHKGQV
CCCCCCCCCCCCHHCCHHHHCCCCCEEEEECCCCCCCHHCCCCCCCCCCCCCCCCCCCCE
YDGWETRRRRDPAGDPGHDAAIVRLGVPGVIAGVVVDTAWFKGNYPPEISVEATEVEGYP
ECCHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
PAAEIARDALWHTIVQRTKVYGDSRNPFDVDSPRRWTHVRLTMYPDGGVARLRVHGHGQP
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCC
DPRFLQAGQFDLAAIENGGLVTDCSNRFYSSPQNLLFPGVARVMGDGWETARRRDGANDW
CHHHEECCCEEEEEECCCCEEEECCHHHHCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCE
VHVRLAGEGLIRLAEIDTSYFVGNSPGASALQGLTAQGDWVPLLARTALQPDTRHRFLLD
EEEEECCCCEEEEEEECCEEEECCCCCHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEEC
GQQPVTDVRLDIYPDGGLARLRLFGELTAAGRASLQGH
CCCCCEEEEEEEECCCCEEEEEEEEHHHHCCCCCCCCC
>Mature Secondary Structure 
TGNAPAGLPDFTMLPDLALRPLGGAVIWANDDLFAEKENLIKPGPADYRPATFGHKGQV
CCCCCCCCCCCHHCCHHHHCCCCCEEEEECCCCCCCHHCCCCCCCCCCCCCCCCCCCCE
YDGWETRRRRDPAGDPGHDAAIVRLGVPGVIAGVVVDTAWFKGNYPPEISVEATEVEGYP
ECCHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCC
PAAEIARDALWHTIVQRTKVYGDSRNPFDVDSPRRWTHVRLTMYPDGGVARLRVHGHGQP
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCC
DPRFLQAGQFDLAAIENGGLVTDCSNRFYSSPQNLLFPGVARVMGDGWETARRRDGANDW
CHHHEECCCEEEEEECCCCEEEECCHHHHCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCE
VHVRLAGEGLIRLAEIDTSYFVGNSPGASALQGLTAQGDWVPLLARTALQPDTRHRFLLD
EEEEECCCCEEEEEEECCEEEECCCCCHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEEC
GQQPVTDVRLDIYPDGGLARLRLFGELTAAGRASLQGH
CCCCCEEEEEEEECCCCEEEEEEEEHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA