| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is pyk [H]
Identifier: 169629724
GI number: 169629724
Start: 2680601
End: 2682019
Strand: Reverse
Name: pyk [H]
Synonym: MAB_2639c
Alternate gene names: 169629724
Gene position: 2682019-2680601 (Counterclockwise)
Preceding gene: 169629725
Following gene: 169629723
Centisome position: 52.93
GC content: 66.53
Gene sequence:
>1419_bases GTGACGAGACGCGGAAAGATCGTTTGTACCCTCGGTCCTGCGACCGGTTCGGCCGAGCTTGTGCGCGCGCTCGTCGAGGC CGGTATGGATGTCGCACGGTTGAACTTCAGCCACGGCGAGCACGCTGACCACGAGCAGAACTACCGCTGGGTGCGCAAGG CATCCGATGAGTCCGGGCGGGCGGTCGGCGTGCTCGCCGATCTTCAGGGCCCCAAGATCAGGCTGGGCAGATTCGCTACC GGGTCCGCCCACTGGGCCACCGGCGAACAGGTCCGGATCACCGTTGAGGACGTGGTAGGCACCCCGGACCGGGTTTCCAC CACCTACAAGCAGTTGGCGGCGGATGCTGCCGTCGGCGACAGGCTCCTGGTCGACGATGGCAAGGTCGGCCTGACGGTCG AAGCAATCGAGGGCGATGACGTCGTTTGCCGGGTGACCGAGGGGGGACCGGTCAGCAACAACAAGGGGTTGTCGCTGCCG GGCATGAACGTCTCGGTGCCGGCCCTTTCCGAGAAGGACATCGCCGACTTGGAGTTCGCGCTGCGGCTCGGCGTCGATCT CATCGCCCTGTCCTTCGTGCGCTCGCCCAGCGATGTGGAGCTGGTGCACGCCGTCATGGACCGTGTGGGACGCCGCGTGC CGGTGATCGCCAAGCTGGAGAAGCCGGAGGCCGTCGCCAACCTCGAGGCGATCGTGTTGGCCTTCGACGCGATCATGGTC GCCCGCGGGGATCTCGGTGTGGAGCTGCCGCTGGAAGATGTGCCCATTGTGCAGAAGCGGGCTATCCAGATCGCTCGGGA AAACGCGCGCCCGGTCATCGTGGCCACCCAGATGCTCGAGTCGATGATCGAGAATTCGCGGCCCACCCGCGCCGAGGCCT CCGATGTGGCCAACGCGGTCCTGGATGGTGCCGACGCCGTGATGCTGTCGGGGGAGACCTCGGTGGGCAAGTATCCGCTG GAGGCGGTGCGGACCATGGCCCGCATCGTGTCCGCGGTGGAGAGCCATTCGGTGAGTGCGCCGCCGCTGACCCATGTTCC GCGCACCAAACGTGGGGTCATCTCGTACGCGGCACGCGACATCGGGGAGCGCCTCAACGCCAAGGCCCTGGTCGCCTTCA CGCAGTCCGGCGATACCGTCCGCCGGCTGGCCCGGCTGCATACTCCACTGCCGGTGCTGGCCTTCACCCCGCTGCCGGAG GTGCGTAGCCAGCTGGCACTCACGTGGGGGACGGAAACCTTCATCGTCCCGGTCATGGAGACCACCGACGGCATGATTCA ACAGGTGGATACGGCATTGCTGGAGATGGAGCGCTATCAGCGGGGAGATCTCGTGGTGATCGTCGCGGGCGCCCCACCCG GGACAGTAGGCTCGACCAATCTGATCCACGTGCACCGGATCGGCGAGGACGACCACTAG
Upstream 100 bases:
>100_bases ATTGGCGACCTGACAACGCAAACCGTTGAAGGTAACCGGTGAGTGAATCGTGCCCGCGCTGACTCGTGAGTAGGTGGCAC CCCGACTATGCTCAAAAGTC
Downstream 100 bases:
>100_bases GAGCTCAGCATCAGCAACGCACCGGACTTCGAACAGCTTCTCGCGCTGCTGGAACTGAAGAATCCCGAGACAGATGTGTT CGTCGGTGGGCATCCGACTG
Product: pyruvate kinase
Products: NA
Alternate protein names: PK [H]
Number of amino acids: Translated: 472; Mature: 471
Protein sequence:
>472_residues MTRRGKIVCTLGPATGSAELVRALVEAGMDVARLNFSHGEHADHEQNYRWVRKASDESGRAVGVLADLQGPKIRLGRFAT GSAHWATGEQVRITVEDVVGTPDRVSTTYKQLAADAAVGDRLLVDDGKVGLTVEAIEGDDVVCRVTEGGPVSNNKGLSLP GMNVSVPALSEKDIADLEFALRLGVDLIALSFVRSPSDVELVHAVMDRVGRRVPVIAKLEKPEAVANLEAIVLAFDAIMV ARGDLGVELPLEDVPIVQKRAIQIARENARPVIVATQMLESMIENSRPTRAEASDVANAVLDGADAVMLSGETSVGKYPL EAVRTMARIVSAVESHSVSAPPLTHVPRTKRGVISYAARDIGERLNAKALVAFTQSGDTVRRLARLHTPLPVLAFTPLPE VRSQLALTWGTETFIVPVMETTDGMIQQVDTALLEMERYQRGDLVVIVAGAPPGTVGSTNLIHVHRIGEDDH
Sequences:
>Translated_472_residues MTRRGKIVCTLGPATGSAELVRALVEAGMDVARLNFSHGEHADHEQNYRWVRKASDESGRAVGVLADLQGPKIRLGRFAT GSAHWATGEQVRITVEDVVGTPDRVSTTYKQLAADAAVGDRLLVDDGKVGLTVEAIEGDDVVCRVTEGGPVSNNKGLSLP GMNVSVPALSEKDIADLEFALRLGVDLIALSFVRSPSDVELVHAVMDRVGRRVPVIAKLEKPEAVANLEAIVLAFDAIMV ARGDLGVELPLEDVPIVQKRAIQIARENARPVIVATQMLESMIENSRPTRAEASDVANAVLDGADAVMLSGETSVGKYPL EAVRTMARIVSAVESHSVSAPPLTHVPRTKRGVISYAARDIGERLNAKALVAFTQSGDTVRRLARLHTPLPVLAFTPLPE VRSQLALTWGTETFIVPVMETTDGMIQQVDTALLEMERYQRGDLVVIVAGAPPGTVGSTNLIHVHRIGEDDH >Mature_471_residues TRRGKIVCTLGPATGSAELVRALVEAGMDVARLNFSHGEHADHEQNYRWVRKASDESGRAVGVLADLQGPKIRLGRFATG SAHWATGEQVRITVEDVVGTPDRVSTTYKQLAADAAVGDRLLVDDGKVGLTVEAIEGDDVVCRVTEGGPVSNNKGLSLPG MNVSVPALSEKDIADLEFALRLGVDLIALSFVRSPSDVELVHAVMDRVGRRVPVIAKLEKPEAVANLEAIVLAFDAIMVA RGDLGVELPLEDVPIVQKRAIQIARENARPVIVATQMLESMIENSRPTRAEASDVANAVLDGADAVMLSGETSVGKYPLE AVRTMARIVSAVESHSVSAPPLTHVPRTKRGVISYAARDIGERLNAKALVAFTQSGDTVRRLARLHTPLPVLAFTPLPEV RSQLALTWGTETFIVPVMETTDGMIQQVDTALLEMERYQRGDLVVIVAGAPPGTVGSTNLIHVHRIGEDDH
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI33286422, Length=490, Percent_Identity=37.1428571428571, Blast_Score=293, Evalue=3e-79, Organism=Homo sapiens, GI33286420, Length=490, Percent_Identity=37.1428571428571, Blast_Score=293, Evalue=3e-79, Organism=Homo sapiens, GI33286418, Length=493, Percent_Identity=37.3225152129817, Blast_Score=291, Evalue=1e-78, Organism=Homo sapiens, GI10835121, Length=492, Percent_Identity=37.3983739837398, Blast_Score=276, Evalue=2e-74, Organism=Homo sapiens, GI32967597, Length=492, Percent_Identity=37.3983739837398, Blast_Score=276, Evalue=4e-74, Organism=Homo sapiens, GI310128732, Length=287, Percent_Identity=37.9790940766551, Blast_Score=190, Evalue=2e-48, Organism=Homo sapiens, GI310128730, Length=287, Percent_Identity=37.9790940766551, Blast_Score=190, Evalue=2e-48, Organism=Homo sapiens, GI310128736, Length=235, Percent_Identity=36.1702127659575, Blast_Score=153, Evalue=4e-37, Organism=Homo sapiens, GI310128734, Length=235, Percent_Identity=36.1702127659575, Blast_Score=153, Evalue=4e-37, Organism=Homo sapiens, GI310128738, Length=214, Percent_Identity=35.5140186915888, Blast_Score=132, Evalue=8e-31, Organism=Escherichia coli, GI1787965, Length=470, Percent_Identity=40.8510638297872, Blast_Score=338, Evalue=4e-94, Organism=Escherichia coli, GI1788160, Length=475, Percent_Identity=40.8421052631579, Blast_Score=288, Evalue=6e-79, Organism=Caenorhabditis elegans, GI17544584, Length=485, Percent_Identity=36.2886597938144, Blast_Score=298, Evalue=5e-81, Organism=Caenorhabditis elegans, GI71984406, Length=484, Percent_Identity=37.8099173553719, Blast_Score=278, Evalue=5e-75, Organism=Caenorhabditis elegans, GI71984413, Length=484, Percent_Identity=37.8099173553719, Blast_Score=278, Evalue=5e-75, Organism=Caenorhabditis elegans, GI17506829, Length=484, Percent_Identity=37.8099173553719, Blast_Score=278, Evalue=6e-75, Organism=Caenorhabditis elegans, GI17506831, Length=484, Percent_Identity=37.8099173553719, Blast_Score=277, Evalue=9e-75, Organism=Saccharomyces cerevisiae, GI6319279, Length=484, Percent_Identity=33.8842975206612, Blast_Score=257, Evalue=3e-69, Organism=Saccharomyces cerevisiae, GI6324923, Length=487, Percent_Identity=33.0595482546201, Blast_Score=230, Evalue=3e-61, Organism=Drosophila melanogaster, GI24648964, Length=490, Percent_Identity=35.9183673469388, Blast_Score=281, Evalue=7e-76, Organism=Drosophila melanogaster, GI28571814, Length=490, Percent_Identity=35.9183673469388, Blast_Score=281, Evalue=8e-76, Organism=Drosophila melanogaster, GI24648966, Length=320, Percent_Identity=41.875, Blast_Score=263, Evalue=3e-70, Organism=Drosophila melanogaster, GI24581235, Length=490, Percent_Identity=28.9795918367347, Blast_Score=224, Evalue=7e-59, Organism=Drosophila melanogaster, GI24646914, Length=283, Percent_Identity=35.3356890459364, Blast_Score=154, Evalue=1e-37,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 124 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 50575; Mature: 50443
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRGKIVCTLGPATGSAELVRALVEAGMDVARLNFSHGEHADHEQNYRWVRKASDESGR CCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCC AVGVLADLQGPKIRLGRFATGSAHWATGEQVRITVEDVVGTPDRVSTTYKQLAADAAVGD EEEEEEECCCCEEEEEEEECCCCCCCCCCEEEEEEHHHCCCCHHHHHHHHHHHHHHHCCC RLLVDDGKVGLTVEAIEGDDVVCRVTEGGPVSNNKGLSLPGMNVSVPALSEKDIADLEFA EEEEECCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHH LRLGVDLIALSFVRSPSDVELVHAVMDRVGRRVPVIAKLEKPEAVANLEAIVLAFDAIMV HHHCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHE ARGDLGVELPLEDVPIVQKRAIQIARENARPVIVATQMLESMIENSRPTRAEASDVANAV ECCCCCEECCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCCCHHHHHHHHH LDGADAVMLSGETSVGKYPLEAVRTMARIVSAVESHSVSAPPLTHVPRTKRGVISYAARD HCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH IGERLNAKALVAFTQSGDTVRRLARLHTPLPVLAFTPLPEVRSQLALTWGTETFIVPVME HHHHCCCEEEEEEECCCHHHHHHHHHCCCCCEEEECCCHHHHHCEEEEECCCEEEEEEEC TTDGMIQQVDTALLEMERYQRGDLVVIVAGAPPGTVGSTNLIHVHRIGEDDH CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCC >Mature Secondary Structure TRRGKIVCTLGPATGSAELVRALVEAGMDVARLNFSHGEHADHEQNYRWVRKASDESGR CCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCC AVGVLADLQGPKIRLGRFATGSAHWATGEQVRITVEDVVGTPDRVSTTYKQLAADAAVGD EEEEEEECCCCEEEEEEEECCCCCCCCCCEEEEEEHHHCCCCHHHHHHHHHHHHHHHCCC RLLVDDGKVGLTVEAIEGDDVVCRVTEGGPVSNNKGLSLPGMNVSVPALSEKDIADLEFA EEEEECCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHH LRLGVDLIALSFVRSPSDVELVHAVMDRVGRRVPVIAKLEKPEAVANLEAIVLAFDAIMV HHHCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHE ARGDLGVELPLEDVPIVQKRAIQIARENARPVIVATQMLESMIENSRPTRAEASDVANAV ECCCCCEECCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCCCCCHHHHHHHHH LDGADAVMLSGETSVGKYPLEAVRTMARIVSAVESHSVSAPPLTHVPRTKRGVISYAARD HCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH IGERLNAKALVAFTQSGDTVRRLARLHTPLPVLAFTPLPEVRSQLALTWGTETFIVPVME HHHHCCCEEEEEEECCCHHHHHHHHHCCCCCEEEECCCHHHHHCEEEEECCCEEEEEEEC TTDGMIQQVDTALLEMERYQRGDLVVIVAGAPPGTVGSTNLIHVHRIGEDDH CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA