| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is dhmA2 [H]
Identifier: 169629375
GI number: 169629375
Start: 2337311
End: 2338261
Strand: Direct
Name: dhmA2 [H]
Synonym: MAB_2289
Alternate gene names: 169629375
Gene position: 2337311-2338261 (Clockwise)
Preceding gene: 169629374
Following gene: 169629376
Centisome position: 46.13
GC content: 61.62
Gene sequence:
>951_bases ATGGGAGTGGCGGCGCACCAACAGATCTACCGTCCAGTATCGGGACACGGGGGAGCGATGAGCTTGGGACTCGAGAAGCA CCGCCGCAGCGTGGATATCGAACGTGGCCGCATCAGCTATCTCGACATCGGTGCCGGTTCACCGACGGTATTCGTTCACG GGGTCCTCACCAACAGTCTGCTCTGGCGCGATGTCGTGACCGCCGTCGCGGCCACGGGACGGCGCTGCATCGCACTGGAT CTGCCCGGTCACGGGCACTCGCCCGTTCCGGCGGATGGCATCGACGTCACACTGTCGGGGCTAGCCCAACTTATCGCGGA ATTTCTGGACAGCATTGGGATTGACGAGTTCGACCTGGTAGCCAACGACACCGGGGGAGCGGTTGCGCAAATCATGGTTG CCCGTCAACCGGACCGAATCAGAACCCTGGCGCTGACCAACTGTGACACCGAAGGCCATGTGCCTCCCAAACTGTTCAAA CCGGTAGTGGCACTGGCCCGGCCACCGCTGATGGCCCTGATCGGCCCACGTCTGTTTGCGCGCCGCAAAGTGCTCAGAGC GCTGTTAGGTGCCGGGTACCGTAAGCCCGGCCGCCTGCCGGATAGCATCGTGGAGTCATACGGACAGCCCGTGTTTGGAA CCGCAGAGTCATCCCGTTTTCTGTCAAAGATGTTGCGGGCGATGCATACCCGAGACCTTGAAGCCGCACGTGCCGGCCTG GTGACATTTACCAAACCGACGCTGATCGCCTGGGGTCTGGGCGACTACTTTTTTCCACTCAAGTACGGGCAGCGACTCGC CGAACTTTTCGGTGGCCCAGTAACCTTCGAAACCGTACCGGACGGCCGACTGTACTTTCCCGATGAGGATGCAGACCGGC TGCTGCCGCTGCTTTACAGACACTGGCACTCGGCGGGTCGGCAAGAGTCCTCCACAGAGGTGGGGAGTTGA
Upstream 100 bases:
>100_bases TCCACATTGTCGACATGGACATGGCCAACGCCCGATTTCTGGGGCCCGCCGAGGCCGTACTGCTGTGCCTGACCAGTGCC GCCCTGGCCACGCTCGGGAT
Downstream 100 bases:
>100_bases CATGTTGGAGATGAAGCCGGGGTGTGAGAAATGTGGAACGCCGCTGAATCATGCCGCGGCCGCGTGGATTTGCAGTTACG AATGCACGTTTTGCCCGCAT
Product: putative hydrolase, alpha/beta hydrolase fold
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MGVAAHQQIYRPVSGHGGAMSLGLEKHRRSVDIERGRISYLDIGAGSPTVFVHGVLTNSLLWRDVVTAVAATGRRCIALD LPGHGHSPVPADGIDVTLSGLAQLIAEFLDSIGIDEFDLVANDTGGAVAQIMVARQPDRIRTLALTNCDTEGHVPPKLFK PVVALARPPLMALIGPRLFARRKVLRALLGAGYRKPGRLPDSIVESYGQPVFGTAESSRFLSKMLRAMHTRDLEAARAGL VTFTKPTLIAWGLGDYFFPLKYGQRLAELFGGPVTFETVPDGRLYFPDEDADRLLPLLYRHWHSAGRQESSTEVGS
Sequences:
>Translated_316_residues MGVAAHQQIYRPVSGHGGAMSLGLEKHRRSVDIERGRISYLDIGAGSPTVFVHGVLTNSLLWRDVVTAVAATGRRCIALD LPGHGHSPVPADGIDVTLSGLAQLIAEFLDSIGIDEFDLVANDTGGAVAQIMVARQPDRIRTLALTNCDTEGHVPPKLFK PVVALARPPLMALIGPRLFARRKVLRALLGAGYRKPGRLPDSIVESYGQPVFGTAESSRFLSKMLRAMHTRDLEAARAGL VTFTKPTLIAWGLGDYFFPLKYGQRLAELFGGPVTFETVPDGRLYFPDEDADRLLPLLYRHWHSAGRQESSTEVGS >Mature_315_residues GVAAHQQIYRPVSGHGGAMSLGLEKHRRSVDIERGRISYLDIGAGSPTVFVHGVLTNSLLWRDVVTAVAATGRRCIALDL PGHGHSPVPADGIDVTLSGLAQLIAEFLDSIGIDEFDLVANDTGGAVAQIMVARQPDRIRTLALTNCDTEGHVPPKLFKP VVALARPPLMALIGPRLFARRKVLRALLGAGYRKPGRLPDSIVESYGQPVFGTAESSRFLSKMLRAMHTRDLEAARAGLV TFTKPTLIAWGLGDYFFPLKYGQRLAELFGGPVTFETVPDGRLYFPDEDADRLLPLLYRHWHSAGRQESSTEVGS
Specific function: Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons [H]
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the haloalkane dehalogenase family. Type 1 subfamily [H]
Homologues:
Organism=Homo sapiens, GI27597073, Length=113, Percent_Identity=28.3185840707965, Blast_Score=69, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.8.1.5 [H]
Molecular weight: Translated: 34311; Mature: 34180
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVAAHQQIYRPVSGHGGAMSLGLEKHRRSVDIERGRISYLDIGAGSPTVFVHGVLTNSL CCCCHHHHHHCCCCCCCCEEECCHHHHHHCCCCCCCCEEEEEECCCCCEEEEEHHHHHHH LWRDVVTAVAATGRRCIALDLPGHGHSPVPADGIDVTLSGLAQLIAEFLDSIGIDEFDLV HHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEE ANDTGGAVAQIMVARQPDRIRTLALTNCDTEGHVPPKLFKPVVALARPPLMALIGPRLFA ECCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHH RRKVLRALLGAGYRKPGRLPDSIVESYGQPVFGTAESSRFLSKMLRAMHTRDLEAARAGL HHHHHHHHHCCCCCCCCCCCHHHHHHCCCCEECCCHHHHHHHHHHHHHHHCCHHHHHCCC VTFTKPTLIAWGLGDYFFPLKYGQRLAELFGGPVTFETVPDGRLYFPDEDADRLLPLLYR EEECCCCEEEECCCCHHHHHHHHHHHHHHHCCCEEEEECCCCEEECCCCCHHHHHHHHHH HWHSAGRQESSTEVGS HHHHCCCCCCCCCCCC >Mature Secondary Structure GVAAHQQIYRPVSGHGGAMSLGLEKHRRSVDIERGRISYLDIGAGSPTVFVHGVLTNSL CCCHHHHHHCCCCCCCCEEECCHHHHHHCCCCCCCCEEEEEECCCCCEEEEEHHHHHHH LWRDVVTAVAATGRRCIALDLPGHGHSPVPADGIDVTLSGLAQLIAEFLDSIGIDEFDLV HHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEE ANDTGGAVAQIMVARQPDRIRTLALTNCDTEGHVPPKLFKPVVALARPPLMALIGPRLFA ECCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHH RRKVLRALLGAGYRKPGRLPDSIVESYGQPVFGTAESSRFLSKMLRAMHTRDLEAARAGL HHHHHHHHHCCCCCCCCCCCHHHHHHCCCCEECCCHHHHHHHHHHHHHHHCCHHHHHCCC VTFTKPTLIAWGLGDYFFPLKYGQRLAELFGGPVTFETVPDGRLYFPDEDADRLLPLLYR EEECCCCEEEECCCCHHHHHHHHHHHHHHHCCCEEEEECCCCEEECCCCCHHHHHHHHHH HWHSAGRQESSTEVGS HHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]