| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629038
Identifier: 169629038
GI number: 169629038
Start: 1949585
End: 1951294
Strand: Reverse
Name: 169629038
Synonym: MAB_1951c
Alternate gene names: NA
Gene position: 1951294-1949585 (Counterclockwise)
Preceding gene: 169629039
Following gene: 169629035
Centisome position: 38.51
GC content: 64.27
Gene sequence:
>1710_bases ATGTCGCGCAATCCGTTGAACCCCGCCGGTGAGACACCGGATATGGGAATCCCGCAGTCGATCGCCGGATCGATGTCGAT GGCCGAACAGTACGAGTGGCATCGCGGGTATCTGCGTCGTCATGCGGTCTCGCGCCGTAACTTCCTGCGAGGCTCGGCGG CAGCCGCGGCCGTCGCCGCGTTGGGAGTGTCACCGTTCGGACGCCGGGCATACGCGGACGAGGCCCAGCTGGGAGTCGCC GGCAGGCGCGTCGGATACGGAGCGGATTCCTCCAGCCAGCTCAGCTTCTCCGCGCAGCTGTCCAGGAATCCACACGGCAC CAAGATCTTTCTCGATCATGGGCCGACACCCGAGCTGGGCGCCTCGCTCGAGGCCGAGGTGCGCAACCTGGTCACCCAAA TTCCATCCAGCGACCACGGCGTGCTGGCGGCCGAACAGTTCTATGTCCATGCGCCCGTACACGGGCTGCCCGGCGGCACC GGGCATTTCTACCGGTGGCGTACCGCCGACGGTTTCCTGAGTGATATCCGCTCGGCCGCCACAGCCGTCCCCGCTGCGCG AAATGCACTTGCGCCGTTCCGTTTCACCATGATGGGCGATCAGGGCACCGACGAGACCCCCGCCCTCCCACCAAATTTGG CTGCCGGTGAATACGACGACAACTACTACGGTGCGGACAACGATCCGGCGGTGCCGCATACGCAGAATGTCATGAATCAG ATCGTGGCCAGCCGACCCGATTTCCATATCCTGGCCGGAGATATCGCCTATGCCGACCCGTCCGGGATGGGCAAGTCGCC GCAGTTCGTGTCCGGTGCCAAAGCTCCGTCCGGCTTCGACAAGTACAACCCCTTCGTCTGGGACGTCTATCTGACCTCGA TTGAGCCCAGCGCCTCAACCACACCGTGGATGTTCGCCACCGGCAACCACGACATGGAGGCCGCGTATGGCAACCACGGT TACGGCGGTCATCTGGCCCGCCTCGGGTTCCCCGGCAACGGCCCCACCGGATGCCCTTCGGCATACTCGTTCACCTATGG CAACGTCGCCGTGCTCTCCCTGGACGCCAATGATGTGTCCTATGAGATCCGCGCGAATACCGGCTACTCCGGTGGCGCCC AAACCGGTTGGGTGGGAAGAACTTTAGCGACGTACCGGGCCAACCCGAATATCGACTTCATCGTGTGCTTCTTCCATCAC TGCGCCTACTCCACGACGCTCTCGCATGCCAGCGACGGGGGCGTGCGTGACGCGTGGTGCGCACTGTTCGACCGTTATCA GGTCGATCTGGTGCTGCAGGGACACAACCACGTCTTCGAGCGCACCGATCCGATTCGTGCCGGACAGCCCACCCGGGAGG CCGGGGACAACTCCACCGTCGACCCGGAAACCGATGGCACCGTGTACTACACGGTGGGCTCCGCGGGTCGGCCACGCTAC GACTTTCAGCCCGGCGAGCCGGAGGGGTACCGCGGCAGGGAGCTTTCAGACACGCTGGTACCCAATAGCTTTGTCTGGGC ATCCGATGGCAGCAAGCATGCCGAGGCGGTCGCCTGGTCGCGGGTGAGGTATCGCAACTACGCGTTCATCCGCGTCGATG TGCGTCCCGGAGCACTGGTCAGCGAGATGGACGTCACCGCCGTGGACGAATATGGCCGGGAGTTCGACAAGGTGACGTAT CGCCGCCGGGTTCACGCGGCAGTGCGCTAG
Upstream 100 bases:
>100_bases GCGGCACACTGATGCGGCCAGGAAAGATTCATCAGGAGTTCGCGGTTGCATCGGCCTGTGCGGTCGCGTTACCGGCCGCC GTGGGCCACCATTCGAATCT
Downstream 100 bases:
>100_bases CCGAGCTGGGTGATCCAGCCGTGCGTATCGGCGAAGGTACCGCGCTGGATTCCCGTCAGTGTGTCCCGCAGGGCCATGGT CACCTCGCCGGGTTCCCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 569; Mature: 568
Protein sequence:
>569_residues MSRNPLNPAGETPDMGIPQSIAGSMSMAEQYEWHRGYLRRHAVSRRNFLRGSAAAAAVAALGVSPFGRRAYADEAQLGVA GRRVGYGADSSSQLSFSAQLSRNPHGTKIFLDHGPTPELGASLEAEVRNLVTQIPSSDHGVLAAEQFYVHAPVHGLPGGT GHFYRWRTADGFLSDIRSAATAVPAARNALAPFRFTMMGDQGTDETPALPPNLAAGEYDDNYYGADNDPAVPHTQNVMNQ IVASRPDFHILAGDIAYADPSGMGKSPQFVSGAKAPSGFDKYNPFVWDVYLTSIEPSASTTPWMFATGNHDMEAAYGNHG YGGHLARLGFPGNGPTGCPSAYSFTYGNVAVLSLDANDVSYEIRANTGYSGGAQTGWVGRTLATYRANPNIDFIVCFFHH CAYSTTLSHASDGGVRDAWCALFDRYQVDLVLQGHNHVFERTDPIRAGQPTREAGDNSTVDPETDGTVYYTVGSAGRPRY DFQPGEPEGYRGRELSDTLVPNSFVWASDGSKHAEAVAWSRVRYRNYAFIRVDVRPGALVSEMDVTAVDEYGREFDKVTY RRRVHAAVR
Sequences:
>Translated_569_residues MSRNPLNPAGETPDMGIPQSIAGSMSMAEQYEWHRGYLRRHAVSRRNFLRGSAAAAAVAALGVSPFGRRAYADEAQLGVA GRRVGYGADSSSQLSFSAQLSRNPHGTKIFLDHGPTPELGASLEAEVRNLVTQIPSSDHGVLAAEQFYVHAPVHGLPGGT GHFYRWRTADGFLSDIRSAATAVPAARNALAPFRFTMMGDQGTDETPALPPNLAAGEYDDNYYGADNDPAVPHTQNVMNQ IVASRPDFHILAGDIAYADPSGMGKSPQFVSGAKAPSGFDKYNPFVWDVYLTSIEPSASTTPWMFATGNHDMEAAYGNHG YGGHLARLGFPGNGPTGCPSAYSFTYGNVAVLSLDANDVSYEIRANTGYSGGAQTGWVGRTLATYRANPNIDFIVCFFHH CAYSTTLSHASDGGVRDAWCALFDRYQVDLVLQGHNHVFERTDPIRAGQPTREAGDNSTVDPETDGTVYYTVGSAGRPRY DFQPGEPEGYRGRELSDTLVPNSFVWASDGSKHAEAVAWSRVRYRNYAFIRVDVRPGALVSEMDVTAVDEYGREFDKVTY RRRVHAAVR >Mature_568_residues SRNPLNPAGETPDMGIPQSIAGSMSMAEQYEWHRGYLRRHAVSRRNFLRGSAAAAAVAALGVSPFGRRAYADEAQLGVAG RRVGYGADSSSQLSFSAQLSRNPHGTKIFLDHGPTPELGASLEAEVRNLVTQIPSSDHGVLAAEQFYVHAPVHGLPGGTG HFYRWRTADGFLSDIRSAATAVPAARNALAPFRFTMMGDQGTDETPALPPNLAAGEYDDNYYGADNDPAVPHTQNVMNQI VASRPDFHILAGDIAYADPSGMGKSPQFVSGAKAPSGFDKYNPFVWDVYLTSIEPSASTTPWMFATGNHDMEAAYGNHGY GGHLARLGFPGNGPTGCPSAYSFTYGNVAVLSLDANDVSYEIRANTGYSGGAQTGWVGRTLATYRANPNIDFIVCFFHHC AYSTTLSHASDGGVRDAWCALFDRYQVDLVLQGHNHVFERTDPIRAGQPTREAGDNSTVDPETDGTVYYTVGSAGRPRYD FQPGEPEGYRGRELSDTLVPNSFVWASDGSKHAEAVAWSRVRYRNYAFIRVDVRPGALVSEMDVTAVDEYGREFDKVTYR RRVHAAVR
Specific function: Unknown
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 - InterPro: IPR008963 - InterPro: IPR015914 - InterPro: IPR006311 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 61720; Mature: 61588
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRNPLNPAGETPDMGIPQSIAGSMSMAEQYEWHRGYLRRHAVSRRNFLRGSAAAAAVAA CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH LGVSPFGRRAYADEAQLGVAGRRVGYGADSSSQLSFSAQLSRNPHGTKIFLDHGPTPELG HCCCCCCCCCCCCCHHHCCCCCEECCCCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCC ASLEAEVRNLVTQIPSSDHGVLAAEQFYVHAPVHGLPGGTGHFYRWRTADGFLSDIRSAA CCHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHH TAVPAARNALAPFRFTMMGDQGTDETPALPPNLAAGEYDDNYYGADNDPAVPHTQNVMNQ HHCCHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH IVASRPDFHILAGDIAYADPSGMGKSPQFVSGAKAPSGFDKYNPFVWDVYLTSIEPSAST HHHCCCCEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCC TPWMFATGNHDMEAAYGNHGYGGHLARLGFPGNGPTGCPSAYSFTYGNVAVLSLDANDVS CCEEEECCCCCCEECCCCCCCCCCEEEECCCCCCCCCCCCCEEEECCCEEEEEECCCCEE YEIRANTGYSGGAQTGWVGRTLATYRANPNIDFIVCFFHHCAYSTTLSHASDGGVRDAWC EEEEECCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEHHHHHHHHHHCCCCCCCCHHHHH ALFDRYQVDLVLQGHNHVFERTDPIRAGQPTREAGDNSTVDPETDGTVYYTVGSAGRPRY HHHHCEEEEEEEECCCCEECCCCCCCCCCCCHHCCCCCCCCCCCCCEEEEEECCCCCCCC DFQPGEPEGYRGRELSDTLVPNSFVWASDGSKHAEAVAWSRVRYRNYAFIRVDVRPGALV CCCCCCCCCCCCCCCCHHCCCCCEEEECCCCCHHHHHHHHHEEECCEEEEEEECCCCCEE SEMDVTAVDEYGREFDKVTYRRRVHAAVR CCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SRNPLNPAGETPDMGIPQSIAGSMSMAEQYEWHRGYLRRHAVSRRNFLRGSAAAAAVAA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH LGVSPFGRRAYADEAQLGVAGRRVGYGADSSSQLSFSAQLSRNPHGTKIFLDHGPTPELG HCCCCCCCCCCCCCHHHCCCCCEECCCCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCC ASLEAEVRNLVTQIPSSDHGVLAAEQFYVHAPVHGLPGGTGHFYRWRTADGFLSDIRSAA CCHHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHH TAVPAARNALAPFRFTMMGDQGTDETPALPPNLAAGEYDDNYYGADNDPAVPHTQNVMNQ HHCCHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH IVASRPDFHILAGDIAYADPSGMGKSPQFVSGAKAPSGFDKYNPFVWDVYLTSIEPSAST HHHCCCCEEEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCC TPWMFATGNHDMEAAYGNHGYGGHLARLGFPGNGPTGCPSAYSFTYGNVAVLSLDANDVS CCEEEECCCCCCEECCCCCCCCCCEEEECCCCCCCCCCCCCEEEECCCEEEEEECCCCEE YEIRANTGYSGGAQTGWVGRTLATYRANPNIDFIVCFFHHCAYSTTLSHASDGGVRDAWC EEEEECCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEHHHHHHHHHHCCCCCCCCHHHHH ALFDRYQVDLVLQGHNHVFERTDPIRAGQPTREAGDNSTVDPETDGTVYYTVGSAGRPRY HHHHCEEEEEEEECCCCEECCCCCCCCCCCCHHCCCCCCCCCCCCCEEEEEECCCCCCCC DFQPGEPEGYRGRELSDTLVPNSFVWASDGSKHAEAVAWSRVRYRNYAFIRVDVRPGALV CCCCCCCCCCCCCCCCHHCCCCCEEEECCCCCHHHHHHHHHEEECCEEEEEEECCCCCEE SEMDVTAVDEYGREFDKVTYRRRVHAAVR CCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]