| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169629028
Identifier: 169629028
GI number: 169629028
Start: 1939885
End: 1940634
Strand: Reverse
Name: 169629028
Synonym: MAB_1940c
Alternate gene names: NA
Gene position: 1940634-1939885 (Counterclockwise)
Preceding gene: 169629029
Following gene: 169629026
Centisome position: 38.3
GC content: 67.07
Gene sequence:
>750_bases ATGGCTAAATCACTGAGTCCCGCCGAGGCCAAGGCCGCCAAGGCCGAGGCAAAGGCGCGCCGTAAGGCCGAATCGAAGGC GCGCCGCGCCCAGATGTGGCAGGCCTTCCAGATTCAGCGCAAGGAAGACAAGCGCCTGCTGCCGTACATGATCGGCGCCA TCGTGGTGATCGTGGCCGCGTTCGCGGTCGCCGGATACTTCTCGGGGGGCATCAGCACGTTCCTGTTCCCGATCCTGGGT GTGGTGCTCGGCGTCTTGGTGGCGTTCATCATCTTCGGCCGTCGCGTGCAAAAGTCGGTGTTCACCAAGGCCGAAGGCCA GAAGGGTGCCGCCGGCTGGGCGCTGGACAATATGCGCGGACGGTGGCGCGTCACCACCGCCGTGGCCGGCACCACGCAAC TGGACGTTGTACACCGTGTGATCGGCCGTCCGGGCATCATCTTCGTCGCCGAGGGCGCCCCCGGCCGACTCGGCCCATTG CTTGCCCAGGAGAAGAAGCGCACCGCACGCCTGGTCGGGGATACGCCGATCTATGACGTCATCGTCGGCAACGAGGATGG TCAGGTGCCGCTGTCCAAGCTGGAGCGCCACCTCACCAAGCTTCCCGCCAACATCACCGCCAAGCAGATGGACTCACTGG AGTCGCGGCTGGCGGCGCTGGGTTCGCGTGCCGCCGCCATGCCGAAGGGCCCGCTGCCCGGCCAGGCGAAGATGCGCGGC GGCATGCAGCGCACCATCAGGCGGCGCTGA
Upstream 100 bases:
>100_bases GCCGCACTGGAACACCTGGCGACGGCGGGTTCGGCGCGGCAAGAGGCCATCAACCTCATCGGATGAGAAGCGCGTCGCGG GCGGGCGATATTCTCTAGCC
Downstream 100 bases:
>100_bases CCTCCAGCTCCAATTTCTGGTGCCGGCGCACCATGATGCTCGGAACCCAATGCGCACCATCGGGTTTGATGGCGAACTCG CGCGTGCGGTCCAACAGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MAKSLSPAEAKAAKAEAKARRKAESKARRAQMWQAFQIQRKEDKRLLPYMIGAIVVIVAAFAVAGYFSGGISTFLFPILG VVLGVLVAFIIFGRRVQKSVFTKAEGQKGAAGWALDNMRGRWRVTTAVAGTTQLDVVHRVIGRPGIIFVAEGAPGRLGPL LAQEKKRTARLVGDTPIYDVIVGNEDGQVPLSKLERHLTKLPANITAKQMDSLESRLAALGSRAAAMPKGPLPGQAKMRG GMQRTIRRR
Sequences:
>Translated_249_residues MAKSLSPAEAKAAKAEAKARRKAESKARRAQMWQAFQIQRKEDKRLLPYMIGAIVVIVAAFAVAGYFSGGISTFLFPILG VVLGVLVAFIIFGRRVQKSVFTKAEGQKGAAGWALDNMRGRWRVTTAVAGTTQLDVVHRVIGRPGIIFVAEGAPGRLGPL LAQEKKRTARLVGDTPIYDVIVGNEDGQVPLSKLERHLTKLPANITAKQMDSLESRLAALGSRAAAMPKGPLPGQAKMRG GMQRTIRRR >Mature_248_residues AKSLSPAEAKAAKAEAKARRKAESKARRAQMWQAFQIQRKEDKRLLPYMIGAIVVIVAAFAVAGYFSGGISTFLFPILGV VLGVLVAFIIFGRRVQKSVFTKAEGQKGAAGWALDNMRGRWRVTTAVAGTTQLDVVHRVIGRPGIIFVAEGAPGRLGPLL AQEKKRTARLVGDTPIYDVIVGNEDGQVPLSKLERHLTKLPANITAKQMDSLESRLAALGSRAAAMPKGPLPGQAKMRGG MQRTIRRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021315 [H]
Pfam domain/function: PF11139 DUF2910 [H]
EC number: NA
Molecular weight: Translated: 26937; Mature: 26806
Theoretical pI: Translated: 11.86; Mature: 11.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKSLSPAEAKAAKAEAKARRKAESKARRAQMWQAFQIQRKEDKRLLPYMIGAIVVIVAA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH FAVAGYFSGGISTFLFPILGVVLGVLVAFIIFGRRVQKSVFTKAEGQKGAAGWALDNMRG HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCC RWRVTTAVAGTTQLDVVHRVIGRPGIIFVAEGAPGRLGPLLAQEKKRTARLVGDTPIYDV CEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEE IVGNEDGQVPLSKLERHLTKLPANITAKQMDSLESRLAALGSRAAAMPKGPLPGQAKMRG EECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH GMQRTIRRR HHHHHHHCC >Mature Secondary Structure AKSLSPAEAKAAKAEAKARRKAESKARRAQMWQAFQIQRKEDKRLLPYMIGAIVVIVAA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH FAVAGYFSGGISTFLFPILGVVLGVLVAFIIFGRRVQKSVFTKAEGQKGAAGWALDNMRG HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCC RWRVTTAVAGTTQLDVVHRVIGRPGIIFVAEGAPGRLGPLLAQEKKRTARLVGDTPIYDV CEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEE IVGNEDGQVPLSKLERHLTKLPANITAKQMDSLESRLAALGSRAAAMPKGPLPGQAKMRG EECCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH GMQRTIRRR HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]