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The map label for this gene is 169629026

Identifier: 169629026

GI number: 169629026

Start: 1937877

End: 1938521

Strand: Reverse

Name: 169629026

Synonym: MAB_1938c

Alternate gene names: NA

Gene position: 1938521-1937877 (Counterclockwise)

Preceding gene: 169629028

Following gene: 169629021

Centisome position: 38.26

GC content: 66.2

Gene sequence:

>645_bases
ATGTCACCGTACGCAGATTGGCTACATGGGTCCGATCGGCACACGATCGCCGCCGACCGCATCGTGTCGGTCGCGGCCAA
GCAGATCGCGCGCCACGGATTGGACCGATTGAACCTTGACGCGGTGGCCCGGGAGGCGGGGTGTTCCCGCGCGACGGTGT
ACCGCCATGTCGGGGGCAAGACCGCGATTGTCGACGCCGTCCTGGCCCGCAACATCGCAAAAGTCACCGCGGACATTCAG
CGAGCGGTCCAATCGGCAGATGCCCGGCGGCGCGCCGTCGTCGCCATCACCGCCTCGCTGACCGCCATCCGCCACGACCC
CGTCATCAGCACGATGATCGCGACCATGTCGCCCACCTCGCTCGGGTCCTATCTGAACGCATCGTCCGAAATCCCGCGTT
CGGCGTCCGCATTCACCGGGCTTGCCGATGAGACCGCCGCGCAGTGGATCTCGCGGGTGGTGATGGCACTCCTGTTCTGG
CCGACAAGCGACCCCGCTCAGGAATCGGAGATGATCGAGCGGTTCGTCTACCCGGTCTTGAAGGACGCCACCGCTTCGCG
GGTCTCCGCCTCGGCGACAAGCGAATCCACGATCTCGCCCGCCCGCACGGCGACATTCGACAGCAGTGAGGACGACAGTC
CGTGA

Upstream 100 bases:

>100_bases
AAGGCCCTGATGCTCGCCGTCTCAGGGCAGGCCCGCCACCTGCGGGAACTCTGAGAATTTCAGCACTATTTGTCTCAACC
TGCGATAGATTTGACCGACG

Downstream 100 bases:

>100_bases
CTGTGCTCGACGGATCCGTTGAGATAGATCTCTCCCGGAGCATCCGCGCGCGGCCGTAGCCGGTAGTCACGTTCGACCAC
CGGCCTCCCCTCTTCGTCGA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MSPYADWLHGSDRHTIAADRIVSVAAKQIARHGLDRLNLDAVAREAGCSRATVYRHVGGKTAIVDAVLARNIAKVTADIQ
RAVQSADARRRAVVAITASLTAIRHDPVISTMIATMSPTSLGSYLNASSEIPRSASAFTGLADETAAQWISRVVMALLFW
PTSDPAQESEMIERFVYPVLKDATASRVSASATSESTISPARTATFDSSEDDSP

Sequences:

>Translated_214_residues
MSPYADWLHGSDRHTIAADRIVSVAAKQIARHGLDRLNLDAVAREAGCSRATVYRHVGGKTAIVDAVLARNIAKVTADIQ
RAVQSADARRRAVVAITASLTAIRHDPVISTMIATMSPTSLGSYLNASSEIPRSASAFTGLADETAAQWISRVVMALLFW
PTSDPAQESEMIERFVYPVLKDATASRVSASATSESTISPARTATFDSSEDDSP
>Mature_213_residues
SPYADWLHGSDRHTIAADRIVSVAAKQIARHGLDRLNLDAVAREAGCSRATVYRHVGGKTAIVDAVLARNIAKVTADIQR
AVQSADARRRAVVAITASLTAIRHDPVISTMIATMSPTSLGSYLNASSEIPRSASAFTGLADETAAQWISRVVMALLFWP
TSDPAQESEMIERFVYPVLKDATASRVSASATSESTISPARTATFDSSEDDSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 22843; Mature: 22712

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPYADWLHGSDRHTIAADRIVSVAAKQIARHGLDRLNLDAVAREAGCSRATVYRHVGGK
CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCH
TAIVDAVLARNIAKVTADIQRAVQSADARRRAVVAITASLTAIRHDPVISTMIATMSPTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHCCHHHHHHHHHCCCHH
LGSYLNASSEIPRSASAFTGLADETAAQWISRVVMALLFWPTSDPAQESEMIERFVYPVL
HHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
KDATASRVSASATSESTISPARTATFDSSEDDSP
HHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCC
>Mature Secondary Structure 
SPYADWLHGSDRHTIAADRIVSVAAKQIARHGLDRLNLDAVAREAGCSRATVYRHVGGK
CCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCH
TAIVDAVLARNIAKVTADIQRAVQSADARRRAVVAITASLTAIRHDPVISTMIATMSPTS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHCCHHHHHHHHHCCCHH
LGSYLNASSEIPRSASAFTGLADETAAQWISRVVMALLFWPTSDPAQESEMIERFVYPVL
HHHHHCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
KDATASRVSASATSESTISPARTATFDSSEDDSP
HHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]