| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is yuaR [C]
Identifier: 169629007
GI number: 169629007
Start: 1919062
End: 1920603
Strand: Direct
Name: yuaR [C]
Synonym: MAB_1919
Alternate gene names: 169629007
Gene position: 1919062-1920603 (Clockwise)
Preceding gene: 169629006
Following gene: 169629008
Centisome position: 37.87
GC content: 66.54
Gene sequence:
>1542_bases ATGATGCGGATGCGCCGGGCGTTGCCAGTGATTTTCTTGATGTTGACGGCGGCCGTCCCCGCGATCCCGGCGGCTGCCGC GCCGCTGCCGGCTCCGAGCCCGTCGCTGCAGGCGTTCTACGACCAAAAGGTCGTGTGGGGTGGGTGCGACAGCTTCGTCA CCGACACCAGCCGCATCCCGACCGCGCGCTGCGCCAAGGTCAAGGTGCCCGTCAACTACGACAAGCTGATGGGCGCGGTG GCCGAACTGGCCGTGCTCAGGGTGCCCGCCACCGGCAAGCGCGTGGGTGCGCTCCTGGTCAACCCCGGCGGCCCGGGCGG ATCGGGTGTGGACCTGGCGGCCGGTATGGGCGCCAAGCTCGGTGATTCGGCGATCGGGCAGAGCTTCGACATCGTCGGAT TCGACCCGCGCGGTGTCGGCGGCTCCACTCCGACGTTGCGCTGCCGTACCGACGCCGAGTTCGATGCCTTCCGCAAGGAG CCGCTGGCCGACTACAGCCAGGCCGGGGTGGCCCACATCGAGGACGTGTACCGCCAATACGTCAACGAATGCGCGAACCG GATGGGGCTCGACTTCCTGGCCAACGCCGGAACTGCTTCGGCAGCAAGAGATATGGATATCGTCAGGAGCATCGTAGGGG CCGGTGCGGCGGACACCAGGCTCAATTACCTGGGCTACTCCTATGGCACCGAGCTGGGCACCCAGTACGCCGAATATTTC CCGCAGAACGTGCGCACCATGGTTCTGGACGGCGCGATCGACCCGACCATCGACCCGGTGGAGTCCAACGTGCGGCAGAT GACGGGGTTCCAGGTGGCGTTCAACGACTATGCCGCCGACTGCGCCAAAGACCCCAAGTGCCCGTTGGGCCCCGACCCTT CCCAGGCCGTGAAGCGTTTTCATCAGCTGATCGATCCGCTGGTGACCAAACCGGCCAAGACCAACGATCCGCGCGGGCTG AGCTACCAGGACGCCATCACAGGCACCATCCAGGCGATGTACACCCCGCGCTACTGGAAGTACCTCACCTCGGGTCTGTC CGGCCTGGCGGACGGCAGCGGACCCGATGACCTGTTGTGGCTGGCCGACCAGTACCAGGAGCGTGACGATCACGGGCGTT ACGACAACTTGCAGGACGCGTTCAACTCGATTCGTTGCGTCGACGGGCCGACGCCGAAGGACTCCGCGCCGTGGGTGGCC GCCGACAAGACGCTGCGCGAGCAGGCCCCATTCTCGAGCTACGGGTCGTTCACTGGCTACGCCCCGCGCGATATGTGCGC CTTCTGGCCCGTGCCGCCGACGTCGACCCCGCACACCCCGTCGACTCCCGGCCTGGCGCCGGTGGTGGTCATCTCCACCA CGCACGACCCGGCGACGCCGTATGAGGCAGGAGTGGCGCTGGCGCGCCAGTTGGGTGGATCGCTCATCAGTTACGAGGGC ACCCAGCACACCGTCGCATTCAACGGTGAGGCATGTGTCGATGACGTGGTGACGCGCTACTTCGTCGACGGCACCGTGCC TCCTAAAGACGTGCGCTGCTGA
Upstream 100 bases:
>100_bases TCGACAAGGCGGCCGAGGACTATCTCATCAAGGTCACGACTCCGCCCGAAGGCGCCCGCTGCTGATCCCTTTCGGGGTGC GACATGGCACGATGTGGCCC
Downstream 100 bases:
>100_bases CCTGCGGCATACTCTCCCCATGGATCGTCAGAAGGAATTCGTGCTGCGCACGCTGGAAGAACGCGATATCCGTTTCGTCC GGCTGTGGTTCACCGATGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 513; Mature: 513
Protein sequence:
>513_residues MMRMRRALPVIFLMLTAAVPAIPAAAAPLPAPSPSLQAFYDQKVVWGGCDSFVTDTSRIPTARCAKVKVPVNYDKLMGAV AELAVLRVPATGKRVGALLVNPGGPGGSGVDLAAGMGAKLGDSAIGQSFDIVGFDPRGVGGSTPTLRCRTDAEFDAFRKE PLADYSQAGVAHIEDVYRQYVNECANRMGLDFLANAGTASAARDMDIVRSIVGAGAADTRLNYLGYSYGTELGTQYAEYF PQNVRTMVLDGAIDPTIDPVESNVRQMTGFQVAFNDYAADCAKDPKCPLGPDPSQAVKRFHQLIDPLVTKPAKTNDPRGL SYQDAITGTIQAMYTPRYWKYLTSGLSGLADGSGPDDLLWLADQYQERDDHGRYDNLQDAFNSIRCVDGPTPKDSAPWVA ADKTLREQAPFSSYGSFTGYAPRDMCAFWPVPPTSTPHTPSTPGLAPVVVISTTHDPATPYEAGVALARQLGGSLISYEG TQHTVAFNGEACVDDVVTRYFVDGTVPPKDVRC
Sequences:
>Translated_513_residues MMRMRRALPVIFLMLTAAVPAIPAAAAPLPAPSPSLQAFYDQKVVWGGCDSFVTDTSRIPTARCAKVKVPVNYDKLMGAV AELAVLRVPATGKRVGALLVNPGGPGGSGVDLAAGMGAKLGDSAIGQSFDIVGFDPRGVGGSTPTLRCRTDAEFDAFRKE PLADYSQAGVAHIEDVYRQYVNECANRMGLDFLANAGTASAARDMDIVRSIVGAGAADTRLNYLGYSYGTELGTQYAEYF PQNVRTMVLDGAIDPTIDPVESNVRQMTGFQVAFNDYAADCAKDPKCPLGPDPSQAVKRFHQLIDPLVTKPAKTNDPRGL SYQDAITGTIQAMYTPRYWKYLTSGLSGLADGSGPDDLLWLADQYQERDDHGRYDNLQDAFNSIRCVDGPTPKDSAPWVA ADKTLREQAPFSSYGSFTGYAPRDMCAFWPVPPTSTPHTPSTPGLAPVVVISTTHDPATPYEAGVALARQLGGSLISYEG TQHTVAFNGEACVDDVVTRYFVDGTVPPKDVRC >Mature_513_residues MMRMRRALPVIFLMLTAAVPAIPAAAAPLPAPSPSLQAFYDQKVVWGGCDSFVTDTSRIPTARCAKVKVPVNYDKLMGAV AELAVLRVPATGKRVGALLVNPGGPGGSGVDLAAGMGAKLGDSAIGQSFDIVGFDPRGVGGSTPTLRCRTDAEFDAFRKE PLADYSQAGVAHIEDVYRQYVNECANRMGLDFLANAGTASAARDMDIVRSIVGAGAADTRLNYLGYSYGTELGTQYAEYF PQNVRTMVLDGAIDPTIDPVESNVRQMTGFQVAFNDYAADCAKDPKCPLGPDPSQAVKRFHQLIDPLVTKPAKTNDPRGL SYQDAITGTIQAMYTPRYWKYLTSGLSGLADGSGPDDLLWLADQYQERDDHGRYDNLQDAFNSIRCVDGPTPKDSAPWVA ADKTLREQAPFSSYGSFTGYAPRDMCAFWPVPPTSTPHTPSTPGLAPVVVISTTHDPATPYEAGVALARQLGGSLISYEG TQHTVAFNGEACVDDVVTRYFVDGTVPPKDVRC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S33 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR013595 [H]
Pfam domain/function: PF00561 Abhydrolase_1; PF08386 Abhydrolase_4 [H]
EC number: NA
Molecular weight: Translated: 54903; Mature: 54903
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRMRRALPVIFLMLTAAVPAIPAAAAPLPAPSPSLQAFYDQKVVWGGCDSFVTDTSRIP CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCEEECCCHHHHCCCCCCC TARCAKVKVPVNYDKLMGAVAELAVLRVPATGKRVGALLVNPGGPGGSGVDLAAGMGAKL CCHHEEEECCCCHHHHHHHHHHHHHEECCCCCCCEEEEEECCCCCCCCCCCHHHCCCCCC GDSAIGQSFDIVGFDPRGVGGSTPTLRCRTDAEFDAFRKEPLADYSQAGVAHIEDVYRQY CHHHCCCCCCEEECCCCCCCCCCCEEEECCCCCHHHHHCCCCHHHHHCCHHHHHHHHHHH VNECANRMGLDFLANAGTASAARDMDIVRSIVGAGAADTRLNYLGYSYGTELGTQYAEYF HHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHC PQNVRTMVLDGAIDPTIDPVESNVRQMTGFQVAFNDYAADCAKDPKCPLGPDPSQAVKRF CCCCEEEEECCCCCCCCCHHHHHHHHHCCCEEEEHHHHHHHCCCCCCCCCCCHHHHHHHH HQLIDPLVTKPAKTNDPRGLSYQDAITGTIQAMYTPRYWKYLTSGLSGLADGSGPDDLLW HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHEE LADQYQERDDHGRYDNLQDAFNSIRCVDGPTPKDSAPWVAADKTLREQAPFSSYGSFTGY HHHHHHCCCCCCCCCCHHHHHHCEEECCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCC APRDMCAFWPVPPTSTPHTPSTPGLAPVVVISTTHDPATPYEAGVALARQLGGSLISYEG CCHHCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEECC TQHTVAFNGEACVDDVVTRYFVDGTVPPKDVRC CEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MMRMRRALPVIFLMLTAAVPAIPAAAAPLPAPSPSLQAFYDQKVVWGGCDSFVTDTSRIP CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCEEECCCHHHHCCCCCCC TARCAKVKVPVNYDKLMGAVAELAVLRVPATGKRVGALLVNPGGPGGSGVDLAAGMGAKL CCHHEEEECCCCHHHHHHHHHHHHHEECCCCCCCEEEEEECCCCCCCCCCCHHHCCCCCC GDSAIGQSFDIVGFDPRGVGGSTPTLRCRTDAEFDAFRKEPLADYSQAGVAHIEDVYRQY CHHHCCCCCCEEECCCCCCCCCCCEEEECCCCCHHHHHCCCCHHHHHCCHHHHHHHHHHH VNECANRMGLDFLANAGTASAARDMDIVRSIVGAGAADTRLNYLGYSYGTELGTQYAEYF HHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHC PQNVRTMVLDGAIDPTIDPVESNVRQMTGFQVAFNDYAADCAKDPKCPLGPDPSQAVKRF CCCCEEEEECCCCCCCCCHHHHHHHHHCCCEEEEHHHHHHHCCCCCCCCCCCHHHHHHHH HQLIDPLVTKPAKTNDPRGLSYQDAITGTIQAMYTPRYWKYLTSGLSGLADGSGPDDLLW HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHEE LADQYQERDDHGRYDNLQDAFNSIRCVDGPTPKDSAPWVAADKTLREQAPFSSYGSFTGY HHHHHHCCCCCCCCCCHHHHHHCEEECCCCCCCCCCCEEHHHHHHHHHCCCCCCCCCCCC APRDMCAFWPVPPTSTPHTPSTPGLAPVVVISTTHDPATPYEAGVALARQLGGSLISYEG CCHHCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEECC TQHTVAFNGEACVDDVVTRYFVDGTVPPKDVRC CEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]