| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is yuaR [C]
Identifier: 169629006
GI number: 169629006
Start: 1917497
End: 1919026
Strand: Direct
Name: yuaR [C]
Synonym: MAB_1918
Alternate gene names: 169629006
Gene position: 1917497-1919026 (Clockwise)
Preceding gene: 169629005
Following gene: 169629007
Centisome position: 37.84
GC content: 65.23
Gene sequence:
>1530_bases ATGATGTTGCGTGGGCTTGGTCGCCCTGGGCTGTTGCCGCTACTGGCTCTCGCCTCGGTGGTAGCCGTCGTCTCTGGTTG TGTGCGGTCGGTCGAAGGTGAGGCGACGGCGGCACACCCGTCGGAAACCTCGCTGAGTTGGGGAGATTGCGACGGCTTCA CTCCCGAAAACGTCACGGTGCCGGCGAGTACGGTGTGTTCGGAACTCGAGGTGCCCGTCGACTACACCAAGCCTGACGGC GCCAAGGCGCGGTTGGCGATCATCAAGTACCCGGCCAAGGGCAACAAGATCGGGTCGCTGCTGATGAACCCCGGTGGGCC GGGGCAGTCCGGCATCGAGGCCGCGACCGCCATCGTCAAGCAGGTGCCCAAGGAGATCCGCGATCGCTTCGACTTCATCG GATTCGATCCCCGTGGTGTCGGTTCCTCCACACCGGCGATCGAGTGCAACTCGGATAAAGACGTCGACCGGCTGCGCGCG CAGAACGACACCGACTACAGCCCCGAGGGCGTGGCCCGGATGGAGCAGGACTCCAAGGACTTCGTGAAGCGCTGCGTCGA CAAGGTGGGGCTGGAATTCCTGGCCAACGTCGGCACCGTGAACGTCGCCAAGGACATGGACCGGCTGCGCGCCGCGCTGG GCGACGAGAAGCTGACTTACCTGGGGTACTCGTACGGCACCCGGATCGGCACCACCTACGCCGAGGAGTTCCCTCAGAAC GTGCGGGCACTCATCCTCGACGGGGTCATCGACCCCAATGCCGATCCGACCCAGGCGGACATCGACCAGATCGCCGGATT CCAAAAGGCTTTCGACAATTACGCCGCCGACTGCGCCAAGAGCCCGAGCTGCCCGCTGGGCACCGATCCGGCGCAGGCGA CCGCGCGGTACCGGGCCATGGTCGATCCGCTGGTCGATCATCCGGCCAAGACCAAGGACGGCCGCGGGCTGTCGCACAGC GACGCGATCATCGGCACCATCATGGTGATGTACTCACCCACGCTGTGGGAGGCCTTCACCAAGGCGCTGCGCCAGCTCAG CGAGGGGTCCGGCGATATCCTGCAGTTGCTCGCCGACGCGTACATGAAGCGCGACGAGGATGGTCACTACAGCCATGCGC AGGACGCACAGACCGCCATCAACTGCGTCGACGAGCCACCGGAGAAGGATCGCGCCAAGGCCGTCGAGAAGGACCGTCGC ATCCGTGAGGTGGCGCCGTTCCAGGACTACGGTGAGTTCACCGGAAACGCACCGCTGGGTGTATGCGCGTTCTGGCCGGT GCCGCCGACCAGCAAGCCGCATCCCATCCACGCCGCCGGACTGCCCAAACTGCTGGTGGTCTCGACGACGTACGATCCGG CGACGCCGTACCAGGCGGGTGTTGAACTGGCCAAACAGCTCGGCGGAGGCCTGCTGACCTACGACGGGACCAAGCACACC ATCGTTTTCGACGGCAATCAGTGCGTCGACAAGGCGGCCGAGGACTATCTCATCAAGGTCACGACTCCGCCCGAAGGCGC CCGCTGCTGA
Upstream 100 bases:
>100_bases CGGATCTGATGCCCGATCTTGGCACCTTGACCGACGATTTCGGCGTGGCGCTCGAGGAGCTAAAGGCTCGCATCTAAGTT CGCATGGCAACATGGCTGAC
Downstream 100 bases:
>100_bases TCCCTTTCGGGGTGCGACATGGCACGATGTGGCCCATGATGCGGATGCGCCGGGCGTTGCCAGTGATTTTCTTGATGTTG ACGGCGGCCGTCCCCGCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 509; Mature: 509
Protein sequence:
>509_residues MMLRGLGRPGLLPLLALASVVAVVSGCVRSVEGEATAAHPSETSLSWGDCDGFTPENVTVPASTVCSELEVPVDYTKPDG AKARLAIIKYPAKGNKIGSLLMNPGGPGQSGIEAATAIVKQVPKEIRDRFDFIGFDPRGVGSSTPAIECNSDKDVDRLRA QNDTDYSPEGVARMEQDSKDFVKRCVDKVGLEFLANVGTVNVAKDMDRLRAALGDEKLTYLGYSYGTRIGTTYAEEFPQN VRALILDGVIDPNADPTQADIDQIAGFQKAFDNYAADCAKSPSCPLGTDPAQATARYRAMVDPLVDHPAKTKDGRGLSHS DAIIGTIMVMYSPTLWEAFTKALRQLSEGSGDILQLLADAYMKRDEDGHYSHAQDAQTAINCVDEPPEKDRAKAVEKDRR IREVAPFQDYGEFTGNAPLGVCAFWPVPPTSKPHPIHAAGLPKLLVVSTTYDPATPYQAGVELAKQLGGGLLTYDGTKHT IVFDGNQCVDKAAEDYLIKVTTPPEGARC
Sequences:
>Translated_509_residues MMLRGLGRPGLLPLLALASVVAVVSGCVRSVEGEATAAHPSETSLSWGDCDGFTPENVTVPASTVCSELEVPVDYTKPDG AKARLAIIKYPAKGNKIGSLLMNPGGPGQSGIEAATAIVKQVPKEIRDRFDFIGFDPRGVGSSTPAIECNSDKDVDRLRA QNDTDYSPEGVARMEQDSKDFVKRCVDKVGLEFLANVGTVNVAKDMDRLRAALGDEKLTYLGYSYGTRIGTTYAEEFPQN VRALILDGVIDPNADPTQADIDQIAGFQKAFDNYAADCAKSPSCPLGTDPAQATARYRAMVDPLVDHPAKTKDGRGLSHS DAIIGTIMVMYSPTLWEAFTKALRQLSEGSGDILQLLADAYMKRDEDGHYSHAQDAQTAINCVDEPPEKDRAKAVEKDRR IREVAPFQDYGEFTGNAPLGVCAFWPVPPTSKPHPIHAAGLPKLLVVSTTYDPATPYQAGVELAKQLGGGLLTYDGTKHT IVFDGNQCVDKAAEDYLIKVTTPPEGARC >Mature_509_residues MMLRGLGRPGLLPLLALASVVAVVSGCVRSVEGEATAAHPSETSLSWGDCDGFTPENVTVPASTVCSELEVPVDYTKPDG AKARLAIIKYPAKGNKIGSLLMNPGGPGQSGIEAATAIVKQVPKEIRDRFDFIGFDPRGVGSSTPAIECNSDKDVDRLRA QNDTDYSPEGVARMEQDSKDFVKRCVDKVGLEFLANVGTVNVAKDMDRLRAALGDEKLTYLGYSYGTRIGTTYAEEFPQN VRALILDGVIDPNADPTQADIDQIAGFQKAFDNYAADCAKSPSCPLGTDPAQATARYRAMVDPLVDHPAKTKDGRGLSHS DAIIGTIMVMYSPTLWEAFTKALRQLSEGSGDILQLLADAYMKRDEDGHYSHAQDAQTAINCVDEPPEKDRAKAVEKDRR IREVAPFQDYGEFTGNAPLGVCAFWPVPPTSKPHPIHAAGLPKLLVVSTTYDPATPYQAGVELAKQLGGGLLTYDGTKHT IVFDGNQCVDKAAEDYLIKVTTPPEGARC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S33 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 54653; Mature: 54653
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLRGLGRPGLLPLLALASVVAVVSGCVRSVEGEATAAHPSETSLSWGDCDGFTPENVTV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEC PASTVCSELEVPVDYTKPDGAKARLAIIKYPAKGNKIGSLLMNPGGPGQSGIEAATAIVK CHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEECCCCCCCHHHHHHHHHHH QVPKEIRDRFDFIGFDPRGVGSSTPAIECNSDKDVDRLRAQNDTDYSPEGVARMEQDSKD HHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCHHHHHCCCCCCCCCHHHHHHHCCHHH FVKRCVDKVGLEFLANVGTVNVAKDMDRLRAALGDEKLTYLGYSYGTRIGTTYAEEFPQN HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECHHCCHHHHHHHHHHHHH VRALILDGVIDPNADPTQADIDQIAGFQKAFDNYAADCAKSPSCPLGTDPAQATARYRAM HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH VDPLVDHPAKTKDGRGLSHSDAIIGTIMVMYSPTLWEAFTKALRQLSEGSGDILQLLADA HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHH YMKRDEDGHYSHAQDAQTAINCVDEPPEKDRAKAVEKDRRIREVAPFQDYGEFTGNAPLG HHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCC VCAFWPVPPTSKPHPIHAAGLPKLLVVSTTYDPATPYQAGVELAKQLGGGLLTYDGTKHT EEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCEEEECCCEEE IVFDGNQCVDKAAEDYLIKVTTPPEGARC EEECCHHHHHHHCCCEEEEEECCCCCCCC >Mature Secondary Structure MMLRGLGRPGLLPLLALASVVAVVSGCVRSVEGEATAAHPSETSLSWGDCDGFTPENVTV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEC PASTVCSELEVPVDYTKPDGAKARLAIIKYPAKGNKIGSLLMNPGGPGQSGIEAATAIVK CHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCEEECCCCCCCHHHHHHHHHHH QVPKEIRDRFDFIGFDPRGVGSSTPAIECNSDKDVDRLRAQNDTDYSPEGVARMEQDSKD HHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCHHHHHCCCCCCCCCHHHHHHHCCHHH FVKRCVDKVGLEFLANVGTVNVAKDMDRLRAALGDEKLTYLGYSYGTRIGTTYAEEFPQN HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECHHCCHHHHHHHHHHHHH VRALILDGVIDPNADPTQADIDQIAGFQKAFDNYAADCAKSPSCPLGTDPAQATARYRAM HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH VDPLVDHPAKTKDGRGLSHSDAIIGTIMVMYSPTLWEAFTKALRQLSEGSGDILQLLADA HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHH YMKRDEDGHYSHAQDAQTAINCVDEPPEKDRAKAVEKDRRIREVAPFQDYGEFTGNAPLG HHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCC VCAFWPVPPTSKPHPIHAAGLPKLLVVSTTYDPATPYQAGVELAKQLGGGLLTYDGTKHT EEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCEEEECCCEEE IVFDGNQCVDKAAEDYLIKVTTPPEGARC EEECCHHHHHHHCCCEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]