| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is nfdA [H]
Identifier: 169628956
GI number: 169628956
Start: 1866638
End: 1868389
Strand: Reverse
Name: nfdA [H]
Synonym: MAB_1868c
Alternate gene names: 169628956
Gene position: 1868389-1866638 (Counterclockwise)
Preceding gene: 169628957
Following gene: 169628954
Centisome position: 36.87
GC content: 67.07
Gene sequence:
>1752_bases ATGTCGATCAATCGGAGGCAGTTCGTGGTCGGCGGAGCCGCCGCTACCGCTGCCACCACGGGACTGGCGGCACTGGCCGG GTGCGGCCACGACACCACCGATCCCGATACCGGTGCCGACCTGATCTTTGTCGGTGGCCCGGTGGTGACGGTCGATGGGC ACGGCACCACGACCGAGGCACTGGCCGTTGCCCAGGGCAAGATCGCCGCGGTCGGTTCACGGCAGGACGTGATGAGGCTG CGCGGTGCCCAAACGGATGTGATCGAGCTCGACGGCCTGGCGCTGCTTCCGGCGTTCGTGGAGGCGCACAGCCACCCGAG CCAGATCGCCGCCACCCTCGGTCCGCCCGCCGTGGACGTGCGCCCTTTCGTCGTTCCCACCGGTCAGCAGGTCATGCAGA AGCTGGCCGACACCGTCCGGAGTACCCCGAAGGGTACCCAGGTACTGCTCTACGGCATCGACGTGCTGCTGCAGCCGGAT CTCCAATTACCTACGCGCACAATTCTTGACGCGCTGGCTCCGGACCATCCGGTGATCATCGTCGCCAACAGCGGACACGC CGCCTACGCCAACACAGCTTCCTTCCGGCTCGCCGGAATCACCAGGGACACACCCAATCCCGTCGGCGCCGAATACGTCC ACGGACCCGACGGCGAGCTCACCGGCGAGGTTCGCGAGGCCGCCGCGCTGACCACCTTGGCAATGCCGTATCTACGGAAT GTCGCCGAGCCCAACGCCTTCCAGAATCTGCACTGGGCGTTTGGGCAGCTGGCCGCCGTGGGCATCGCCACCGCCAGCGA GCACAGCTACAGCGCCGCGCAGCAGGGCGACCTCTACCGCAGGATGGCCGCCGATCCGGGTGTCAAACTGCGCATCCGCG CCTATGAGATGGGCGCCCCCGAGCTGGCCAAGGACCCCACGCATGTCGCCGGGCCGGCGGCCGGCGCCGATCAGCTGTTC GCGCAGATCGGCATGAAGCTGTGGGCAGACGGATCACCCTGGCAGGGAAATATTTTCACCTCGTTCCCCTACCTGGACAC CGCGGCTACGCGCCGCATGGGCCTGGAGCCACACCATCACGGCGGCATGAACTACACGCCGGCCCAGGTCACCGAGCTGG CGACGGCCTTCATCGAGCAGGGCTGGCAGCTGGCGTGTCACGTCCACGGTGACCGCGCGATCGATGTGGTGCTCGACGCG TATGAGAAGGCCCAGTCCCCCGCCTCGCTACGCTCCCGCCTGGAACATGTGGGCGCGATGACTCCCGCACAGTTCCAGCG CGCGGCACGCCTGGGTGTGCATCCGAGCCTGTTCATCGAACATGTCTACTTCTGGGGCGACCCACTCATCGACGAGCTGT TCGGTCAAGACCATGGCGCGCACTGGATGTCGGCAAAATCTGCGCTGGACGCCGGGCTCAGAATCTCGTTTCACAACGAT GGCAACGTGTCCCCGCCGAACCCGCTGGGCAACATCGCCACCGCCGTCACCCGCACGGCCAAGGGCTCCGGCCGTGTGCT GGCCCCCGAACAACGGATCAGCGTCACGCAGGCCGTAAGAGCCCAGACCATCGACGCGGCCTGGCAGCTGCATCTCGACA ACGAGGTCGGCAGTCTGGAAGTGGGCAAGTACGCCGACCTGGTGGTGTTATCCGCCGACCCGCACGCGGTAGACCCGCAG GCACTGCGCGATATCTCGGTGCGCGCCACCTACCTGGCCGGTCGGCAGACCTATGCCGCACCCGTCGGCTGA
Upstream 100 bases:
>100_bases GTCTCCGAGCGCATCGGCATCGAAAGCATCGAAGCCGCGTTCGAAAAGATGCACCATGGCGAGGTCCTGCGCTCCGTAGT GGTGCTCTAGCCGCACTCCG
Downstream 100 bases:
>100_bases CTCGCACCCTCAGCGCTGCGGGTCCAGCATTCCGCGGGTCTTCTTGGCCTCGTACAGCGCATGGTCGGCTTGCTGCACAA GCGATTCCAGGTCGACCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 583; Mature: 582
Protein sequence:
>583_residues MSINRRQFVVGGAAATAATTGLAALAGCGHDTTDPDTGADLIFVGGPVVTVDGHGTTTEALAVAQGKIAAVGSRQDVMRL RGAQTDVIELDGLALLPAFVEAHSHPSQIAATLGPPAVDVRPFVVPTGQQVMQKLADTVRSTPKGTQVLLYGIDVLLQPD LQLPTRTILDALAPDHPVIIVANSGHAAYANTASFRLAGITRDTPNPVGAEYVHGPDGELTGEVREAAALTTLAMPYLRN VAEPNAFQNLHWAFGQLAAVGIATASEHSYSAAQQGDLYRRMAADPGVKLRIRAYEMGAPELAKDPTHVAGPAAGADQLF AQIGMKLWADGSPWQGNIFTSFPYLDTAATRRMGLEPHHHGGMNYTPAQVTELATAFIEQGWQLACHVHGDRAIDVVLDA YEKAQSPASLRSRLEHVGAMTPAQFQRAARLGVHPSLFIEHVYFWGDPLIDELFGQDHGAHWMSAKSALDAGLRISFHND GNVSPPNPLGNIATAVTRTAKGSGRVLAPEQRISVTQAVRAQTIDAAWQLHLDNEVGSLEVGKYADLVVLSADPHAVDPQ ALRDISVRATYLAGRQTYAAPVG
Sequences:
>Translated_583_residues MSINRRQFVVGGAAATAATTGLAALAGCGHDTTDPDTGADLIFVGGPVVTVDGHGTTTEALAVAQGKIAAVGSRQDVMRL RGAQTDVIELDGLALLPAFVEAHSHPSQIAATLGPPAVDVRPFVVPTGQQVMQKLADTVRSTPKGTQVLLYGIDVLLQPD LQLPTRTILDALAPDHPVIIVANSGHAAYANTASFRLAGITRDTPNPVGAEYVHGPDGELTGEVREAAALTTLAMPYLRN VAEPNAFQNLHWAFGQLAAVGIATASEHSYSAAQQGDLYRRMAADPGVKLRIRAYEMGAPELAKDPTHVAGPAAGADQLF AQIGMKLWADGSPWQGNIFTSFPYLDTAATRRMGLEPHHHGGMNYTPAQVTELATAFIEQGWQLACHVHGDRAIDVVLDA YEKAQSPASLRSRLEHVGAMTPAQFQRAARLGVHPSLFIEHVYFWGDPLIDELFGQDHGAHWMSAKSALDAGLRISFHND GNVSPPNPLGNIATAVTRTAKGSGRVLAPEQRISVTQAVRAQTIDAAWQLHLDNEVGSLEVGKYADLVVLSADPHAVDPQ ALRDISVRATYLAGRQTYAAPVG >Mature_582_residues SINRRQFVVGGAAATAATTGLAALAGCGHDTTDPDTGADLIFVGGPVVTVDGHGTTTEALAVAQGKIAAVGSRQDVMRLR GAQTDVIELDGLALLPAFVEAHSHPSQIAATLGPPAVDVRPFVVPTGQQVMQKLADTVRSTPKGTQVLLYGIDVLLQPDL QLPTRTILDALAPDHPVIIVANSGHAAYANTASFRLAGITRDTPNPVGAEYVHGPDGELTGEVREAAALTTLAMPYLRNV AEPNAFQNLHWAFGQLAAVGIATASEHSYSAAQQGDLYRRMAADPGVKLRIRAYEMGAPELAKDPTHVAGPAAGADQLFA QIGMKLWADGSPWQGNIFTSFPYLDTAATRRMGLEPHHHGGMNYTPAQVTELATAFIEQGWQLACHVHGDRAIDVVLDAY EKAQSPASLRSRLEHVGAMTPAQFQRAARLGVHPSLFIEHVYFWGDPLIDELFGQDHGAHWMSAKSALDAGLRISFHNDG NVSPPNPLGNIATAVTRTAKGSGRVLAPEQRISVTQAVRAQTIDAAWQLHLDNEVGSLEVGKYADLVVLSADPHAVDPQA LRDISVRATYLAGRQTYAAPVG
Specific function: Hydrolyzes N-substituted formamides, but not amides. N- benzylformamide is the preferred substrate, while N-butylformamide is hydrolyzed at a much lower rate. Has very low activity towards allylformamide, N-(2-cyclohex-1-enylethyl)formamide and N-(alpha-
COG id: COG1574
COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013108 - InterPro: IPR011059 [H]
Pfam domain/function: PF07969 Amidohydro_3 [H]
EC number: =3.5.1.91 [H]
Molecular weight: Translated: 61736; Mature: 61605
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSINRRQFVVGGAAATAATTGLAALAGCGHDTTDPDTGADLIFVGGPVVTVDGHGTTTEA CCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCEEEEECCCCCCHHH LAVAQGKIAAVGSRQDVMRLRGAQTDVIELDGLALLPAFVEAHSHPSQIAATLGPPAVDV HHECCCCEEECCCHHHHHHHCCCCCCEEEECCHHHHHHHHHHCCCHHHHHHHCCCCCCCC RPFVVPTGQQVMQKLADTVRSTPKGTQVLLYGIDVLLQPDLQLPTRTILDALAPDHPVII EEEEECCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHCCCCCEEE VANSGHAAYANTASFRLAGITRDTPNPVGAEYVHGPDGELTGEVREAAALTTLAMPYLRN EECCCCEEEECCCEEEEEEECCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHH VAEPNAFQNLHWAFGQLAAVGIATASEHSYSAAQQGDLYRRMAADPGVKLRIRAYEMGAP CCCCCHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCC ELAKDPTHVAGPAAGADQLFAQIGMKLWADGSPWQGNIFTSFPYLDTAATRRMGLEPHHH HHCCCCCCCCCCCCCHHHHHHHHCHHEECCCCCCCCCEEECCCCHHHHHHHHCCCCCCCC GGMNYTPAQVTELATAFIEQGWQLACHVHGDRAIDVVLDAYEKAQSPASLRSRLEHVGAM CCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEHHHHHHHHHCCCCHHHHHHHHHHCCC TPAQFQRAARLGVHPSLFIEHVYFWGDPLIDELFGQDHGAHWMSAKSALDAGLRISFHND CHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHCCCCEEEECCC GNVSPPNPLGNIATAVTRTAKGSGRVLAPEQRISVTQAVRAQTIDAAWQLHLDNEVGSLE CCCCCCCCCHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHCEEEEEEECCCCCCEE VGKYADLVVLSADPHAVDPQALRDISVRATYLAGRQTYAAPVG CCCCCCEEEECCCCCCCCHHHHHHHHEEEEEEECCCCCCCCCC >Mature Secondary Structure SINRRQFVVGGAAATAATTGLAALAGCGHDTTDPDTGADLIFVGGPVVTVDGHGTTTEA CCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCEEEEECCCCCCHHH LAVAQGKIAAVGSRQDVMRLRGAQTDVIELDGLALLPAFVEAHSHPSQIAATLGPPAVDV HHECCCCEEECCCHHHHHHHCCCCCCEEEECCHHHHHHHHHHCCCHHHHHHHCCCCCCCC RPFVVPTGQQVMQKLADTVRSTPKGTQVLLYGIDVLLQPDLQLPTRTILDALAPDHPVII EEEEECCHHHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHCCCCCEEE VANSGHAAYANTASFRLAGITRDTPNPVGAEYVHGPDGELTGEVREAAALTTLAMPYLRN EECCCCEEEECCCEEEEEEECCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHH VAEPNAFQNLHWAFGQLAAVGIATASEHSYSAAQQGDLYRRMAADPGVKLRIRAYEMGAP CCCCCHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCC ELAKDPTHVAGPAAGADQLFAQIGMKLWADGSPWQGNIFTSFPYLDTAATRRMGLEPHHH HHCCCCCCCCCCCCCHHHHHHHHCHHEECCCCCCCCCEEECCCCHHHHHHHHCCCCCCCC GGMNYTPAQVTELATAFIEQGWQLACHVHGDRAIDVVLDAYEKAQSPASLRSRLEHVGAM CCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEHHHHHHHHHCCCCHHHHHHHHHHCCC TPAQFQRAARLGVHPSLFIEHVYFWGDPLIDELFGQDHGAHWMSAKSALDAGLRISFHND CHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHCCCCEEEECCC GNVSPPNPLGNIATAVTRTAKGSGRVLAPEQRISVTQAVRAQTIDAAWQLHLDNEVGSLE CCCCCCCCCHHHHHHHHHCCCCCCCEECCHHHHHHHHHHHHHHHCEEEEEEECCCCCCEE VGKYADLVVLSADPHAVDPQALRDISVRATYLAGRQTYAAPVG CCCCCCEEEECCCCCCCCHHHHHHHHEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA