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The map label for this gene is 169628588

Identifier: 169628588

GI number: 169628588

Start: 1511193

End: 1511765

Strand: Reverse

Name: 169628588

Synonym: MAB_1497c

Alternate gene names: NA

Gene position: 1511765-1511193 (Counterclockwise)

Preceding gene: 169628589

Following gene: 169628587

Centisome position: 29.83

GC content: 63.53

Gene sequence:

>573_bases
ATGGTTGCCCGCGGAGAGACACGTAGCGCCGCGCTCCTCGCGGTCGCATTGCAGGTACTGATACGCGATGGATACGACCG
CTTCTCCATGGATTCGGTTGCGGCACTGGCCCATGCCAGCAAAACTACGATCTACCGCAGATGGAGCAACAAGGCCGAAC
TGATCAAGGCCGCACTGGACGCTCATGATGCGAGCTTCAACGACGAGGTCTTCGACACCGGCGGATTACGCACAGACCTC
ATCGCCACAATGGGCATGCTGCGCCGCAAGGCGCAGGCGCTACCGCCAACCCTCTACCCAGACCTGATACGCGCGATGGA
GCACGACGAGACACTCTCCGACGCGATCCGTCGCCATCTCGCCGACCCAGGTCTGTCTCCCTTCGACGCTCCGCTGTCGC
GCGCGGTCGGCCGGGGCGAGGCGGGCGTCGATGTTGATCGTCAGCTCATTCACGATGTCGCCGAAGCAATGCTTACCCAT
CGCCTGACCCTGGGCGGCCCCCTTGACGACGCGTTCATCGGCCGGCTCGTCGATGACGTCTTGCTCGTCCTTATCCGACC
CGGGGCCCGATGA

Upstream 100 bases:

>100_bases
CCGATTGAACGGGTGCGCTCCCTGTTCCGCGGAGACCGTGTGGCCTTCGAGGCGGTACTGAAGGAGTGACATAAGTGTAC
GGTATGCGTACACTTATGTC

Downstream 100 bases:

>100_bases
CAGTGGTGATCGCCGGGGCCGGCCCCACGGGCCTGACGCTGGCGTGCGAATTGACGCGGCGCGGCATCGCATGCCGGGTG
CTGGACAAGGCTCCCGATCT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MVARGETRSAALLAVALQVLIRDGYDRFSMDSVAALAHASKTTIYRRWSNKAELIKAALDAHDASFNDEVFDTGGLRTDL
IATMGMLRRKAQALPPTLYPDLIRAMEHDETLSDAIRRHLADPGLSPFDAPLSRAVGRGEAGVDVDRQLIHDVAEAMLTH
RLTLGGPLDDAFIGRLVDDVLLVLIRPGAR

Sequences:

>Translated_190_residues
MVARGETRSAALLAVALQVLIRDGYDRFSMDSVAALAHASKTTIYRRWSNKAELIKAALDAHDASFNDEVFDTGGLRTDL
IATMGMLRRKAQALPPTLYPDLIRAMEHDETLSDAIRRHLADPGLSPFDAPLSRAVGRGEAGVDVDRQLIHDVAEAMLTH
RLTLGGPLDDAFIGRLVDDVLLVLIRPGAR
>Mature_190_residues
MVARGETRSAALLAVALQVLIRDGYDRFSMDSVAALAHASKTTIYRRWSNKAELIKAALDAHDASFNDEVFDTGGLRTDL
IATMGMLRRKAQALPPTLYPDLIRAMEHDETLSDAIRRHLADPGLSPFDAPLSRAVGRGEAGVDVDRQLIHDVAEAMLTH
RLTLGGPLDDAFIGRLVDDVLLVLIRPGAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 20721; Mature: 20721

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVARGETRSAALLAVALQVLIRDGYDRFSMDSVAALAHASKTTIYRRWSNKAELIKAALD
CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
AHDASFNDEVFDTGGLRTDLIATMGMLRRKAQALPPTLYPDLIRAMEHDETLSDAIRRHL
HHCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHH
ADPGLSPFDAPLSRAVGRGEAGVDVDRQLIHDVAEAMLTHRLTLGGPLDDAFIGRLVDDV
CCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LLVLIRPGAR
HHHHHCCCCC
>Mature Secondary Structure
MVARGETRSAALLAVALQVLIRDGYDRFSMDSVAALAHASKTTIYRRWSNKAELIKAALD
CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
AHDASFNDEVFDTGGLRTDLIATMGMLRRKAQALPPTLYPDLIRAMEHDETLSDAIRRHL
HHCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHH
ADPGLSPFDAPLSRAVGRGEAGVDVDRQLIHDVAEAMLTHRLTLGGPLDDAFIGRLVDDV
CCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LLVLIRPGAR
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]