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The map label for this gene is atpC

Identifier: 169628545

GI number: 169628545

Start: 1458868

End: 1459233

Strand: Direct

Name: atpC

Synonym: MAB_1454

Alternate gene names: 169628545

Gene position: 1458868-1459233 (Clockwise)

Preceding gene: 169628544

Following gene: 169628546

Centisome position: 28.79

GC content: 63.66

Gene sequence:

>366_bases
ATGTCCGAGATTGATGTCGAGATCGTCGCCGTCGAGCGTGAGATCTGGTCGGGTAAGGCCACATTCGTCTTCACCCGCAC
GACCTCCGGCGAAATCGGCATCTTGCCGCACCACATTCCGTTGGTGGCGCAGCTGGTGGACGATGCGGCGGTGAAGATCG
AGCGCGAGGGTAGTGATGACCTGTGGTGGGCGATCGACGGGGGCTTCCTGTCGATCACCGACACCAAGGTGAGCATCCTG
GCTGAATCCGCGCAGGCTCGTGCGGATATCGATGAGGCCAAGGCCAAGACCGATTCCGGTTCCGAGGATCCACGGGTCGC
GGCGCAGGGTCGCGCGCGCCTCCGTGCGCTCGGCCAGACGGTTTAG

Upstream 100 bases:

>100_bases
GTTCTTCCTCATCGGTGGCCTGGACGACTTGGCCAAGAAGGCCGAAAGCCTCGGCGCCAAGCTGTAGTTCGTCACTAGCC
ATCTGAAGGAGGTGCATTGA

Downstream 100 bases:

>100_bases
CTCTACCCGGCTGATACAAGCGTAAAAGGAACCCGCTTGTGAGCGTGACGGCGATGATCGAGATATCGGTCATCGCCGTC
CTTGCTTTGGCGGTGGCCGC

Product: F0F1 ATP synthase subunit epsilon

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit

Number of amino acids: Translated: 121; Mature: 120

Protein sequence:

>121_residues
MSEIDVEIVAVEREIWSGKATFVFTRTTSGEIGILPHHIPLVAQLVDDAAVKIEREGSDDLWWAIDGGFLSITDTKVSIL
AESAQARADIDEAKAKTDSGSEDPRVAAQGRARLRALGQTV

Sequences:

>Translated_121_residues
MSEIDVEIVAVEREIWSGKATFVFTRTTSGEIGILPHHIPLVAQLVDDAAVKIEREGSDDLWWAIDGGFLSITDTKVSIL
AESAQARADIDEAKAKTDSGSEDPRVAAQGRARLRALGQTV
>Mature_120_residues
SEIDVEIVAVEREIWSGKATFVFTRTTSGEIGILPHHIPLVAQLVDDAAVKIEREGSDDLWWAIDGGFLSITDTKVSILA
ESAQARADIDEAKAKTDSGSEDPRVAAQGRARLRALGQTV

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPE_MYCA9 (B1MLW3)

Other databases:

- EMBL:   CU458896
- RefSeq:   YP_001702194.1
- ProteinModelPortal:   B1MLW3
- SMR:   B1MLW3
- EnsemblBacteria:   EBMYCT00000008335
- GeneID:   5963975
- GenomeReviews:   CU458896_GR
- KEGG:   mab:MAB_1454
- GeneTree:   EBGT00050000016019
- HOGENOM:   HBG663981
- OMA:   GHEAFLA
- ProtClustDB:   PRK00571
- BioCyc:   MABS561007:MAB_1454-MONOMER
- HAMAP:   MF_00530
- InterPro:   IPR001469
- InterPro:   IPR020546
- Gene3D:   G3DSA:2.60.15.10
- PANTHER:   PTHR13822
- ProDom:   PD000944
- TIGRFAMs:   TIGR01216

Pfam domain/function: PF02823 ATP-synt_DE_N; SSF51344 ATPsynt_DE

EC number: 3.6.3.14

Molecular weight: Translated: 13060; Mature: 12929

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEIDVEIVAVEREIWSGKATFVFTRTTSGEIGILPHHIPLVAQLVDDAAVKIEREGSDD
CCCCEEEEEEEEEHHCCCCEEEEEEECCCCCEEECCCHHHHHHHHHCCCEEEEEECCCCC
LWWAIDGGFLSITDTKVSILAESAQARADIDEAKAKTDSGSEDPRVAAQGRARLRALGQT
EEEEEECCEEEEECCEEEEEECCHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHCCC
V
C
>Mature Secondary Structure 
SEIDVEIVAVEREIWSGKATFVFTRTTSGEIGILPHHIPLVAQLVDDAAVKIEREGSDD
CCCEEEEEEEEEHHCCCCEEEEEEECCCCCEEECCCHHHHHHHHHCCCEEEEEECCCCC
LWWAIDGGFLSITDTKVSILAESAQARADIDEAKAKTDSGSEDPRVAAQGRARLRALGQT
EEEEEECCEEEEECCEEEEEECCHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHCCC
V
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA