| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628546
Identifier: 169628546
GI number: 169628546
Start: 1459287
End: 1459703
Strand: Direct
Name: 169628546
Synonym: MAB_1455
Alternate gene names: NA
Gene position: 1459287-1459703 (Clockwise)
Preceding gene: 169628545
Following gene: 169628548
Centisome position: 28.8
GC content: 64.99
Gene sequence:
>417_bases ATGATCGAGATATCGGTCATCGCCGTCCTTGCTTTGGCGGTGGCCGCATTGAGCTTCCGCCTGCTGAAGTTGCGCAACGG CGGTACCGCGGCGCTCTTACGCGATATGCCGGAGGTAGGGGAGGGCCGCTGGCGCCACGGCGTCATGCGGTACCGCGAGT CACAAGCCGAGTTCTATCGCCTCTCCAGTGTGCGGCTCTGGCCCGATCGCCAGCTGTCACGCCGCGACCTGGAAATCATC GACCGCCGGATCCCACGCGGTGACGAGTACGACATCATGACCGCCGAGATCGTGGTCTTGCAGTTGCGCGATGGTGCGCG CGACTACGAAATGGCGCTGGACCGAGGGGCTTTGACCGCGTTCATGTCCTGGGTCGAGTCGCGTCCCTCACCTCGGGCGC AGCGCCGCAGCCGCTAA
Upstream 100 bases:
>100_bases CGGCGCAGGGTCGCGCGCGCCTCCGTGCGCTCGGCCAGACGGTTTAGCTCTACCCGGCTGATACAAGCGTAAAAGGAACC CGCTTGTGAGCGTGACGGCG
Downstream 100 bases:
>100_bases CTTCTTGTATCCAGCCCGGCGACTAGGCGGGTTGTGCCGGCCCACCCGGCTTCCACAGCGTGTCTTTTCCGTTGTTGGCG ACCCGCGACAAGATGAACAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MIEISVIAVLALAVAALSFRLLKLRNGGTAALLRDMPEVGEGRWRHGVMRYRESQAEFYRLSSVRLWPDRQLSRRDLEII DRRIPRGDEYDIMTAEIVVLQLRDGARDYEMALDRGALTAFMSWVESRPSPRAQRRSR
Sequences:
>Translated_138_residues MIEISVIAVLALAVAALSFRLLKLRNGGTAALLRDMPEVGEGRWRHGVMRYRESQAEFYRLSSVRLWPDRQLSRRDLEII DRRIPRGDEYDIMTAEIVVLQLRDGARDYEMALDRGALTAFMSWVESRPSPRAQRRSR >Mature_138_residues MIEISVIAVLALAVAALSFRLLKLRNGGTAALLRDMPEVGEGRWRHGVMRYRESQAEFYRLSSVRLWPDRQLSRRDLEII DRRIPRGDEYDIMTAEIVVLQLRDGARDYEMALDRGALTAFMSWVESRPSPRAQRRSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv1312 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019675 [H]
Pfam domain/function: PF10739 DUF2550 [H]
EC number: NA
Molecular weight: Translated: 15989; Mature: 15989
Theoretical pI: Translated: 10.70; Mature: 10.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEISVIAVLALAVAALSFRLLKLRNGGTAALLRDMPEVGEGRWRHGVMRYRESQAEFYR CEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHH LSSVRLWPDRQLSRRDLEIIDRRIPRGDEYDIMTAEIVVLQLRDGARDYEMALDRGALTA HCCEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHH FMSWVESRPSPRAQRRSR HHHHHHCCCCCCHHCCCC >Mature Secondary Structure MIEISVIAVLALAVAALSFRLLKLRNGGTAALLRDMPEVGEGRWRHGVMRYRESQAEFYR CEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHH LSSVRLWPDRQLSRRDLEIIDRRIPRGDEYDIMTAEIVVLQLRDGARDYEMALDRGALTA HCCEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHH FMSWVESRPSPRAQRRSR HHHHHHCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]