Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

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The map label for this gene is 169628500

Identifier: 169628500

GI number: 169628500

Start: 1412431

End: 1413702

Strand: Reverse

Name: 169628500

Synonym: MAB_1409c

Alternate gene names: NA

Gene position: 1413702-1412431 (Counterclockwise)

Preceding gene: 169628501

Following gene: 169628499

Centisome position: 27.9

GC content: 64.07

Gene sequence:

>1272_bases
ATGTCCACTCCGACGGCGGATTCGCCGACTATCAATCAGGTGAATCGCGGGCCGGTTCTCCTGCTGCTCTTCGCATCTGT
CGTCGCAGCCATCGGCAACGGTGTCTCTATCGTCGCACTGCCCTGGCTTGTATTGCAGCGCAACGGTTCCGCGGCTGACG
CTGCCATCGTGGCGGCGGCAGGAACCCTTCCGCTGGTCTTCTCGACACTCATCTCGGGCACCGCCGTCGACTACTTCGGA
CGGCGCGTCATGTCGATCTTCTCCGACGTCCTGTCCCTCGTATCGGTCTCGGCCATCCCGATCCTTGCGATGACCACCGG
ACTCAACGTCCCGCTGTTGGCCGCGCTGGCCGCCCTCGGCGCCATCTTCGATCCGGCAGGTATCACCGCACGCGAGTCCA
TGCTGCCGGCGGCCGCGAAGTCGGCCGGGTGGTCTCTGGACAAGATGAACAGCATGTACGAGGCGACCTTCAATGTCGCC
TACATCGTGGGGCCCGGCCTCGGCGGGCTGCTCATCGCGTCCGTCGGCGGCGTCAACACCATGTGGGTCACCGCGGCCAG
CTTCGTCGTGTCGATCATCGCCATCGCCCTCCTCAAGGTCGACGGCGCCGGAAAGCCCGCGCACGAAACCCGGCCGACGG
GCGTGTTCAGTGGTGTGCTCGAGGGCTTGAGGTTCTTCTGGAACATCAAGATCCTGCGCACCATCGCGCTGGTCGACATG
GCGATTACCGCGCTGTACCTGCCCATCGAAAGCGTGTTGCTGCCCAAGCACTTCAGCGATATCGGCGCACCCCAACAGCT
CGGCTGGATGCTCATGGCGATCTCCGTGGGCGGACTCCTCGGAGCGCTCGGCTATGCGACCATGGTGCGCCACTTCCAGC
GTCGCACCATCATGCTGTGCGCCACCTTTACCGCCGGCATAACCACATTGGGTATGTCGCTGCTCCCACCGATCGCCGTA
CTGCTGGTGCTGGCCGCCTGCCTCGGCTTCATCTACGGCCCGGTCGCACCGATCGCCAACTTCGTGATGCAGACCCGCTC
TCCCGAGCACCTGCGCGGCCGTGTGGTCGGCGTCATGACTTCCACCGCGTATTGCGCGGGCCCGTTGGGTTTCATGCTCG
CCGGTCCCATCGCCGACAAGTTTGGTGTCGCCACAACTCTGGTCATCCTCGGTGCACCGATGCTGCTCATCGCCATCGCG
AGTACTCGGATGCGTGTCTTGCGAGAATTGGACCAGGACGAACCGCAGCCCGACAAGGAACCAACTCGGTAG

Upstream 100 bases:

>100_bases
CTGGAGGCGACCGCCCAGATCATCCGTGCAGCGGTGCAAGCCAACTAGCCAAGAAAATCGCTCGACCAACCCCGCCACCC
GCTGCTAGGTTTCGTGCGAC

Downstream 100 bases:

>100_bases
GGTCGGCTCCGTGGCTGATTTCGAGGGAAAAACTGCACTGATCACGGGCGGCGCGCGCGGTATGGGCCGGTCGCACGCGG
TGGCGCTGGCCGAGGCCGGC

Product: putative drug antiporter protein precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 422

Protein sequence:

>423_residues
MSTPTADSPTINQVNRGPVLLLLFASVVAAIGNGVSIVALPWLVLQRNGSAADAAIVAAAGTLPLVFSTLISGTAVDYFG
RRVMSIFSDVLSLVSVSAIPILAMTTGLNVPLLAALAALGAIFDPAGITARESMLPAAAKSAGWSLDKMNSMYEATFNVA
YIVGPGLGGLLIASVGGVNTMWVTAASFVVSIIAIALLKVDGAGKPAHETRPTGVFSGVLEGLRFFWNIKILRTIALVDM
AITALYLPIESVLLPKHFSDIGAPQQLGWMLMAISVGGLLGALGYATMVRHFQRRTIMLCATFTAGITTLGMSLLPPIAV
LLVLAACLGFIYGPVAPIANFVMQTRSPEHLRGRVVGVMTSTAYCAGPLGFMLAGPIADKFGVATTLVILGAPMLLIAIA
STRMRVLRELDQDEPQPDKEPTR

Sequences:

>Translated_423_residues
MSTPTADSPTINQVNRGPVLLLLFASVVAAIGNGVSIVALPWLVLQRNGSAADAAIVAAAGTLPLVFSTLISGTAVDYFG
RRVMSIFSDVLSLVSVSAIPILAMTTGLNVPLLAALAALGAIFDPAGITARESMLPAAAKSAGWSLDKMNSMYEATFNVA
YIVGPGLGGLLIASVGGVNTMWVTAASFVVSIIAIALLKVDGAGKPAHETRPTGVFSGVLEGLRFFWNIKILRTIALVDM
AITALYLPIESVLLPKHFSDIGAPQQLGWMLMAISVGGLLGALGYATMVRHFQRRTIMLCATFTAGITTLGMSLLPPIAV
LLVLAACLGFIYGPVAPIANFVMQTRSPEHLRGRVVGVMTSTAYCAGPLGFMLAGPIADKFGVATTLVILGAPMLLIAIA
STRMRVLRELDQDEPQPDKEPTR
>Mature_422_residues
STPTADSPTINQVNRGPVLLLLFASVVAAIGNGVSIVALPWLVLQRNGSAADAAIVAAAGTLPLVFSTLISGTAVDYFGR
RVMSIFSDVLSLVSVSAIPILAMTTGLNVPLLAALAALGAIFDPAGITARESMLPAAAKSAGWSLDKMNSMYEATFNVAY
IVGPGLGGLLIASVGGVNTMWVTAASFVVSIIAIALLKVDGAGKPAHETRPTGVFSGVLEGLRFFWNIKILRTIALVDMA
ITALYLPIESVLLPKHFSDIGAPQQLGWMLMAISVGGLLGALGYATMVRHFQRRTIMLCATFTAGITTLGMSLLPPIAVL
LVLAACLGFIYGPVAPIANFVMQTRSPEHLRGRVVGVMTSTAYCAGPLGFMLAGPIADKFGVATTLVILGAPMLLIAIAS
TRMRVLRELDQDEPQPDKEPTR

Specific function: Could be involved in tetracycline efflux [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 44157; Mature: 44026

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPTADSPTINQVNRGPVLLLLFASVVAAIGNGVSIVALPWLVLQRNGSAADAAIVAAA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHC
GTLPLVFSTLISGTAVDYFGRRVMSIFSDVLSLVSVSAIPILAMTTGLNVPLLAALAALG
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
AIFDPAGITARESMLPAAAKSAGWSLDKMNSMYEATFNVAYIVGPGLGGLLIASVGGVNT
HHCCCCCCCHHHHHCCHHHHHCCCCHHHHHHHHHHHHEEEEEECCCCHHHHHHHCCCCHH
MWVTAASFVVSIIAIALLKVDGAGKPAHETRPTGVFSGVLEGLRFFWNIKILRTIALVDM
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AITALYLPIESVLLPKHFSDIGAPQQLGWMLMAISVGGLLGALGYATMVRHFQRRTIMLC
HHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
ATFTAGITTLGMSLLPPIAVLLVLAACLGFIYGPVAPIANFVMQTRSPEHLRGRVVGVMT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCEEEEEH
STAYCAGPLGFMLAGPIADKFGVATTLVILGAPMLLIAIASTRMRVLRELDQDEPQPDKE
HHHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PTR
CCC
>Mature Secondary Structure 
STPTADSPTINQVNRGPVLLLLFASVVAAIGNGVSIVALPWLVLQRNGSAADAAIVAAA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHC
GTLPLVFSTLISGTAVDYFGRRVMSIFSDVLSLVSVSAIPILAMTTGLNVPLLAALAALG
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
AIFDPAGITARESMLPAAAKSAGWSLDKMNSMYEATFNVAYIVGPGLGGLLIASVGGVNT
HHCCCCCCCHHHHHCCHHHHHCCCCHHHHHHHHHHHHEEEEEECCCCHHHHHHHCCCCHH
MWVTAASFVVSIIAIALLKVDGAGKPAHETRPTGVFSGVLEGLRFFWNIKILRTIALVDM
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AITALYLPIESVLLPKHFSDIGAPQQLGWMLMAISVGGLLGALGYATMVRHFQRRTIMLC
HHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
ATFTAGITTLGMSLLPPIAVLLVLAACLGFIYGPVAPIANFVMQTRSPEHLRGRVVGVMT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCEEEEEH
STAYCAGPLGFMLAGPIADKFGVATTLVILGAPMLLIAIASTRMRVLRELDQDEPQPDKE
HHHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PTR
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]