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The map label for this gene is ycfF [C]

Identifier: 169628501

GI number: 169628501

Start: 1413755

End: 1414174

Strand: Reverse

Name: ycfF [C]

Synonym: MAB_1410c

Alternate gene names: 169628501

Gene position: 1414174-1413755 (Counterclockwise)

Preceding gene: 169628505

Following gene: 169628500

Centisome position: 27.91

GC content: 62.62

Gene sequence:

>420_bases
ATGTCCTGTGTGTTCTGCGCCATCGTTGCCGGCGAGTCACCGTCGTTTCGTGTGTACGAGGACGAGACGACGCTCGCCTT
CCTCGACATTCGTCCGATCACCCGCGGACACACACTCGTGATTCCAAAGGCTCACGCCCAAGATCTGACAGACCTGAAGC
CCGATGATGCCGCCGCCATCATGACGGTCGGCCAACGCATAGCCAATGCCATGCGCGGCTCGGAACTACAGAGCGACGGG
ACCAACCTGGCGCTCAACGACGGCCGTGTCGCCTTCCAGACGGTCATGCACGCACACCTCCACGTGGTGCCCCGCCGCGG
TGGTGACAAGCTGGCCTTCGCAAAGGGATTCATGGTTCGGCGCGATCCCGATCTGGAGGCGACCGCCCAGATCATCCGTG
CAGCGGTGCAAGCCAACTAG

Upstream 100 bases:

>100_bases
TGGTGCCGTTGGGGTGTTTTCGGGTGGTCCAGCCGTGGTTGAGGAGGCGGTGGGGGCGCAGGCGAAGGTGAGGTGACCAC
TCACCGGCTACGGTGTGCTC

Downstream 100 bases:

>100_bases
CCAAGAAAATCGCTCGACCAACCCCGCCACCCGCTGCTAGGTTTCGTGCGACATGTCCACTCCGACGGCGGATTCGCCGA
CTATCAATCAGGTGAATCGC

Product: histidine triad (HIT) protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 138

Protein sequence:

>139_residues
MSCVFCAIVAGESPSFRVYEDETTLAFLDIRPITRGHTLVIPKAHAQDLTDLKPDDAAAIMTVGQRIANAMRGSELQSDG
TNLALNDGRVAFQTVMHAHLHVVPRRGGDKLAFAKGFMVRRDPDLEATAQIIRAAVQAN

Sequences:

>Translated_139_residues
MSCVFCAIVAGESPSFRVYEDETTLAFLDIRPITRGHTLVIPKAHAQDLTDLKPDDAAAIMTVGQRIANAMRGSELQSDG
TNLALNDGRVAFQTVMHAHLHVVPRRGGDKLAFAKGFMVRRDPDLEATAQIIRAAVQAN
>Mature_138_residues
SCVFCAIVAGESPSFRVYEDETTLAFLDIRPITRGHTLVIPKAHAQDLTDLKPDDAAAIMTVGQRIANAMRGSELQSDGT
NLALNDGRVAFQTVMHAHLHVVPRRGGDKLAFAKGFMVRRDPDLEATAQIIRAAVQAN

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI261278358, Length=99, Percent_Identity=35.3535353535354, Blast_Score=65, Evalue=2e-11,
Organism=Homo sapiens, GI4503719, Length=99, Percent_Identity=35.3535353535354, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17556280, Length=91, Percent_Identity=36.2637362637363, Blast_Score=66, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6320078, Length=105, Percent_Identity=39.0476190476191, Blast_Score=94, Evalue=6e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 15083; Mature: 14952

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCVFCAIVAGESPSFRVYEDETTLAFLDIRPITRGHTLVIPKAHAQDLTDLKPDDAAAI
CCEEEEEEEECCCCCEEEEECCCEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHH
MTVGQRIANAMRGSELQSDGTNLALNDGRVAFQTVMHAHLHVVPRRGGDKLAFAKGFMVR
HHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHEEEEECCCCCEEEEECCEEEE
RDPDLEATAQIIRAAVQAN
ECCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SCVFCAIVAGESPSFRVYEDETTLAFLDIRPITRGHTLVIPKAHAQDLTDLKPDDAAAI
CEEEEEEEECCCCCEEEEECCCEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCHHHH
MTVGQRIANAMRGSELQSDGTNLALNDGRVAFQTVMHAHLHVVPRRGGDKLAFAKGFMVR
HHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHEEEEECCCCCEEEEECCEEEE
RDPDLEATAQIIRAAVQAN
ECCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]