| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628427
Identifier: 169628427
GI number: 169628427
Start: 1335922
End: 1336887
Strand: Reverse
Name: 169628427
Synonym: MAB_1334c
Alternate gene names: NA
Gene position: 1336887-1335922 (Counterclockwise)
Preceding gene: 169628428
Following gene: 169628419
Centisome position: 26.38
GC content: 63.87
Gene sequence:
>966_bases ATGTCCCCGCCGCCGGAAGAGGCCGACTCGCCTTCGAACACCGTGGCGCAGCGATCGCGGCTGGCACGGGGCGCACTGCT GTCACTGAAAGTGCTCGGCGCGTTGGTGATGGCGGTTCTCATGGTGGTCGGCACGGCGACGGCACTGATCGCGTATCAGG GAAAGCGTGCCCCGGCGGGTAATCACGAATATGTGGCACTGGGCAGTTCGTTCGGTGCGGGTCCCGGCGTACCCGACCGC GACCCGACGAGCCCCATTCTTTGTATTCGCTCGGACAACAACTATCCGCACCAGCTGGCCAGATTGCGCCACCTGGGCCT CACCGATGTCACCTGCTCCGGGGCCACTGCCCAGAATGTCTTGCACGGAGGGCAGCACTTTCAGCCACCGCAGCTCGACG CGGTCGTCGACACCACCAAACTTGTCACCATCACCGCGGGTGGAAACGATATCTACTATCTGCCCAATCTCGTCGCCTGG GCATGCGCGAAAGATCCCGGCGCCTTGTCCTTCTCATGGCGGCTGAGCGTCTGCACCATCCGGCCCGACGATGAGGTCGA CACGGCGGCAACACAAGTGGGTGCGAGCCTGCAACAGATTGGCCGGGAAGCGCACCGGCGTGCGCCGCATGCCACCGTCG TCTTTGTCGATTACATGACGGTGCTGCCAGACGCGGGATACTGCCCGGACAAGCTACCCATCACCAGCGCCCAATTCGAC CGTGCCCGGTTCCTGGCGAAAACGCTTGCGGCCAAGACGAAAGAGGCAGCACAGGCGACGGGGGCTCTCTTCGTATCGGC ATCCGATCTGACTCGTGGGCACGATATTTGTTCCGCGGACCCCTGGGTCTACGGCTACACGTTCCCGGCGACCCCGCTGA ATTACGGGCCCATGGCCTTCCACCCGACGTTGCGCGCGATGACCGTGATCGCCGCGGGGATCAATAAGGCCCTCACCCGC AGGTAA
Upstream 100 bases:
>100_bases GCTGTTCCGGCGTAATTCGCAGACCGGCGCGGTTGAGGTGGTATCGCGCGACGGCGGCGCGTTCGAGTTGAACGCGGCGC TGCACGCCAACTAGTACTCG
Downstream 100 bases:
>100_bases GTTCTACCGCCAGGCGTACAGATCGCGTAGGAGCGCGATCTCCGCCCCGTGGTGCAGCAGTTCCCGATTGATATGCAGCG CCAGTGTCAGGAATGGTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: GDSL Family Lipase; Lipolytic Protein G-D-S-L Family; Hydrolase; Esterase; G-D-S-L Family Lipolytic Protein; GDSL-Like Lipase/Acylhydrolase; Vegetative Cell Wall
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MSPPPEEADSPSNTVAQRSRLARGALLSLKVLGALVMAVLMVVGTATALIAYQGKRAPAGNHEYVALGSSFGAGPGVPDR DPTSPILCIRSDNNYPHQLARLRHLGLTDVTCSGATAQNVLHGGQHFQPPQLDAVVDTTKLVTITAGGNDIYYLPNLVAW ACAKDPGALSFSWRLSVCTIRPDDEVDTAATQVGASLQQIGREAHRRAPHATVVFVDYMTVLPDAGYCPDKLPITSAQFD RARFLAKTLAAKTKEAAQATGALFVSASDLTRGHDICSADPWVYGYTFPATPLNYGPMAFHPTLRAMTVIAAGINKALTR R
Sequences:
>Translated_321_residues MSPPPEEADSPSNTVAQRSRLARGALLSLKVLGALVMAVLMVVGTATALIAYQGKRAPAGNHEYVALGSSFGAGPGVPDR DPTSPILCIRSDNNYPHQLARLRHLGLTDVTCSGATAQNVLHGGQHFQPPQLDAVVDTTKLVTITAGGNDIYYLPNLVAW ACAKDPGALSFSWRLSVCTIRPDDEVDTAATQVGASLQQIGREAHRRAPHATVVFVDYMTVLPDAGYCPDKLPITSAQFD RARFLAKTLAAKTKEAAQATGALFVSASDLTRGHDICSADPWVYGYTFPATPLNYGPMAFHPTLRAMTVIAAGINKALTR R >Mature_320_residues SPPPEEADSPSNTVAQRSRLARGALLSLKVLGALVMAVLMVVGTATALIAYQGKRAPAGNHEYVALGSSFGAGPGVPDRD PTSPILCIRSDNNYPHQLARLRHLGLTDVTCSGATAQNVLHGGQHFQPPQLDAVVDTTKLVTITAGGNDIYYLPNLVAWA CAKDPGALSFSWRLSVCTIRPDDEVDTAATQVGASLQQIGREAHRRAPHATVVFVDYMTVLPDAGYCPDKLPITSAQFDR ARFLAKTLAAKTKEAAQATGALFVSASDLTRGHDICSADPWVYGYTFPATPLNYGPMAFHPTLRAMTVIAAGINKALTRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34118; Mature: 33987
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPPPEEADSPSNTVAQRSRLARGALLSLKVLGALVMAVLMVVGTATALIAYQGKRAPAG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCC NHEYVALGSSFGAGPGVPDRDPTSPILCIRSDNNYPHQLARLRHLGLTDVTCSGATAQNV CCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEECCCHHHHH LHGGQHFQPPQLDAVVDTTKLVTITAGGNDIYYLPNLVAWACAKDPGALSFSWRLSVCTI HCCCCCCCCCCCHHEECCEEEEEEEECCCEEEECCHHHHHHHCCCCCCEEEEEEEEEEEE RPDDEVDTAATQVGASLQQIGREAHRRAPHATVVFVDYMTVLPDAGYCPDKLPITSAQFD CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHCCCCCCCCCCCCCCCCHHH RARFLAKTLAAKTKEAAQATGALFVSASDLTRGHDICSADPWVYGYTFPATPLNYGPMAF HHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEE HPTLRAMTVIAAGINKALTRR CHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SPPPEEADSPSNTVAQRSRLARGALLSLKVLGALVMAVLMVVGTATALIAYQGKRAPAG CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCC NHEYVALGSSFGAGPGVPDRDPTSPILCIRSDNNYPHQLARLRHLGLTDVTCSGATAQNV CCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEECCCHHHHH LHGGQHFQPPQLDAVVDTTKLVTITAGGNDIYYLPNLVAWACAKDPGALSFSWRLSVCTI HCCCCCCCCCCCHHEECCEEEEEEEECCCEEEECCHHHHHHHCCCCCCEEEEEEEEEEEE RPDDEVDTAATQVGASLQQIGREAHRRAPHATVVFVDYMTVLPDAGYCPDKLPITSAQFD CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHCCCCCCCCCCCCCCCCHHH RARFLAKTLAAKTKEAAQATGALFVSASDLTRGHDICSADPWVYGYTFPATPLNYGPMAF HHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEE HPTLRAMTVIAAGINKALTRR CHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA