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The map label for this gene is padR [H]

Identifier: 169628419

GI number: 169628419

Start: 1326597

End: 1327166

Strand: Reverse

Name: padR [H]

Synonym: MAB_1326c

Alternate gene names: 169628419

Gene position: 1327166-1326597 (Counterclockwise)

Preceding gene: 169628427

Following gene: 169628418

Centisome position: 26.19

GC content: 62.28

Gene sequence:

>570_bases
GTGGCCCTCACCCACGCACTACTGCTATCTCTTGCCGAACAAAGCGGCTCCGGCTACGAGTTGACCAACCGATTCGACCG
GTCGATCGGCTACTTCTACAGCGCCACTCACCAGCAGATCTATCGCACGCTGCGCCGCATGGAGGACGACAGCTGGCTGC
ACTGTCAGGTCGTCGACCAAGAGGGGCGACCTGCGAAGAAGGTCTACACCGTTGCCGAGCTCGGCTATCGCGAGTTGTCG
CGCTGGATCGCCAGCTCCGAGGGCACCGACATGCGCGACCTCGCCCTCAAGGTCCGCGCCGCCACCTACGCGGACAGCGA
CGTGGTCATCGAACAAATCCGCGCTCAGCGAAATGCCCACGCTGCGGCCCTGGAGGGCTACCTCCACATGCAAAAACGCC
AGTTTCCCGCTCCGGACCAGCTCTCCGGGGCGGCACTGCACCAATACCTCGTCCTGCGCGGAGGCATCCGCATGGAGGAG
GGCTTCACCGATTGGTGCGACGAAATGCTGTCAGCTTTGTCCAGCTCACATGTCCCAGCCCGGACTGACGAAAGTGAAAT
CGATGAGTAA

Upstream 100 bases:

>100_bases
AGTTACAGTTACCGTGGCCAGCACTTAACTGGACTCAATATGCAGACAGTTGCACTGCAACAAGTTGCATAGGGTGCGGG
ATTCGTGCCAACATGCTCGT

Downstream 100 bases:

>100_bases
TTCGTACCCAACCCTGCTATCCCCCTTGGATCTCGGATTCACGACGCTGAAGAACCGAGTTGTCATGGGCTCCATGCATG
CCGGCCTCGAAGACTTCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MALTHALLLSLAEQSGSGYELTNRFDRSIGYFYSATHQQIYRTLRRMEDDSWLHCQVVDQEGRPAKKVYTVAELGYRELS
RWIASSEGTDMRDLALKVRAATYADSDVVIEQIRAQRNAHAAALEGYLHMQKRQFPAPDQLSGAALHQYLVLRGGIRMEE
GFTDWCDEMLSALSSSHVPARTDESEIDE

Sequences:

>Translated_189_residues
MALTHALLLSLAEQSGSGYELTNRFDRSIGYFYSATHQQIYRTLRRMEDDSWLHCQVVDQEGRPAKKVYTVAELGYRELS
RWIASSEGTDMRDLALKVRAATYADSDVVIEQIRAQRNAHAAALEGYLHMQKRQFPAPDQLSGAALHQYLVLRGGIRMEE
GFTDWCDEMLSALSSSHVPARTDESEIDE
>Mature_188_residues
ALTHALLLSLAEQSGSGYELTNRFDRSIGYFYSATHQQIYRTLRRMEDDSWLHCQVVDQEGRPAKKVYTVAELGYRELSR
WIASSEGTDMRDLALKVRAATYADSDVVIEQIRAQRNAHAAALEGYLHMQKRQFPAPDQLSGAALHQYLVLRGGIRMEEG
FTDWCDEMLSALSSSHVPARTDESEIDE

Specific function: Negative transcriptional regulator of padC phenolic acid decarboxylase [H]

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018309
- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR; PF10400 Vir_act_alpha_C [H]

EC number: NA

Molecular weight: Translated: 21429; Mature: 21298

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALTHALLLSLAEQSGSGYELTNRFDRSIGYFYSATHQQIYRTLRRMEDDSWLHCQVVDQ
CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC
EGRPAKKVYTVAELGYRELSRWIASSEGTDMRDLALKVRAATYADSDVVIEQIRAQRNAH
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
AAALEGYLHMQKRQFPAPDQLSGAALHQYLVLRGGIRMEEGFTDWCDEMLSALSSSHVPA
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCC
RTDESEIDE
CCCHHCCCC
>Mature Secondary Structure 
ALTHALLLSLAEQSGSGYELTNRFDRSIGYFYSATHQQIYRTLRRMEDDSWLHCQVVDQ
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC
EGRPAKKVYTVAELGYRELSRWIASSEGTDMRDLALKVRAATYADSDVVIEQIRAQRNAH
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
AAALEGYLHMQKRQFPAPDQLSGAALHQYLVLRGGIRMEEGFTDWCDEMLSALSSSHVPA
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCC
RTDESEIDE
CCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]