| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169628428
Identifier: 169628428
GI number: 169628428
Start: 1336894
End: 1337853
Strand: Reverse
Name: 169628428
Synonym: MAB_1335c
Alternate gene names: NA
Gene position: 1337853-1336894 (Counterclockwise)
Preceding gene: 169628430
Following gene: 169628427
Centisome position: 26.4
GC content: 67.08
Gene sequence:
>960_bases GTGAGCGGAGCAGTAGCACTTGGCCTGGCGACCATCGCGGCGGACGGATCGGTTCTGGATACCTGGTTCCCGGCCCCCGA ATTGACCGACACCCCCGGCACCCCCGGCACCGAACGGGTCTTCGAGCCCGACGCGCCCGCGGAGTTGTCCGGGCTGGCTG GCTCAGACCCCGATCGTGGCGTCGAGAAGGTGTTGGTACGCACCACGATTGGCTCGCTGGAAGACAAGCCCGTCGATGCC TACGACGCTTACCTGCGCTTGCATCTGCTCTCGCACCGTCTGATCCAGCCACACGGCGCCAGCGTGGACGGACTGTTCGG CGTGCTCACCAATGTGGTCTGGACGAACTTCGGCCCCTGCGCGGTCGAGGGATTCGAGGCGGTGCGCGCAAGGCTTAAGG CGCGCGCCGGCGCGCATAGCTCGGTCACGGTGTTCGGCATCGATAAATTCCCCCGCATGGTCGACTACGTGGTGCCCACC GGCGTGCGTATCGCCGACGCCGACCGCGTACGCCTGGGCGCGCACCTGGCGCCCGGCACGACCGTGATGCACGAGGGTTT CGTGAACTTCAACGCCGGCACGCTGGGCGCGTCGATGGTGGAGGGCCGTATCTCGGCCGGCGTTGTGGTGGGCGACGGCT CCGATATCGGCGGCGGCGCATCGATCATGGGCACCCTGTCCGGCGGCGGCAGCCAGGTGATCTCGGTCGGTCAGCGCTCG CTGCTGGGCGCCAACTCCGGTCTGGGCATCAGCCTGGGCGATGACTGCATCATCGAGGCCGGGCTGTATGTCACGGCGGG AACCAAGGTCGCTACACCGGACGGTAAGACCATCAAGGCATTGGAGCTGTCTGGCGCCAATAACCTGCTGTTCCGGCGTA ATTCGCAGACCGGCGCGGTTGAGGTGGTATCGCGCGACGGCGGCGCGTTCGAGTTGAACGCGGCGCTGCACGCCAACTAG
Upstream 100 bases:
>100_bases TCGTGACGGGACTCACTGGGGATGTCTACCAGGGCAGCCGTCAGGGCGATCGGGTCACCAGCGAGTTCAAGCGCCACCGG TTCAGGCTAGCGTGTACACC
Downstream 100 bases:
>100_bases TACTCGATGTCCCCGCCGCCGGAAGAGGCCGACTCGCCTTCGAACACCGTGGCGCAGCGATCGCGGCTGGCACGGGGCGC ACTGCTGTCACTGAAAGTGC
Product: transferase
Products: CoA; (R)-2-(succinylamino)-6-oxoheptanedioate
Alternate protein names: Transferase; Tetrahydrodipicolinate Succinylase; Tetrahydropicolinate Succinylase; Tetrahydrodipicolinate N- Succinyltransferase; Succinyltransferase; Transferase Hexapeptide Repeat Containing Protein; Succinyl-Transferase; Lysine Biosynthesis-Like Protein; Transferase Tetrahydrodipicolinate N-Succinyltransferase; Tranferase; Tetrahydrodipicolinate N-Succinyltransferase-Like Protein
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MSGAVALGLATIAADGSVLDTWFPAPELTDTPGTPGTERVFEPDAPAELSGLAGSDPDRGVEKVLVRTTIGSLEDKPVDA YDAYLRLHLLSHRLIQPHGASVDGLFGVLTNVVWTNFGPCAVEGFEAVRARLKARAGAHSSVTVFGIDKFPRMVDYVVPT GVRIADADRVRLGAHLAPGTTVMHEGFVNFNAGTLGASMVEGRISAGVVVGDGSDIGGGASIMGTLSGGGSQVISVGQRS LLGANSGLGISLGDDCIIEAGLYVTAGTKVATPDGKTIKALELSGANNLLFRRNSQTGAVEVVSRDGGAFELNAALHAN
Sequences:
>Translated_319_residues MSGAVALGLATIAADGSVLDTWFPAPELTDTPGTPGTERVFEPDAPAELSGLAGSDPDRGVEKVLVRTTIGSLEDKPVDA YDAYLRLHLLSHRLIQPHGASVDGLFGVLTNVVWTNFGPCAVEGFEAVRARLKARAGAHSSVTVFGIDKFPRMVDYVVPT GVRIADADRVRLGAHLAPGTTVMHEGFVNFNAGTLGASMVEGRISAGVVVGDGSDIGGGASIMGTLSGGGSQVISVGQRS LLGANSGLGISLGDDCIIEAGLYVTAGTKVATPDGKTIKALELSGANNLLFRRNSQTGAVEVVSRDGGAFELNAALHAN >Mature_318_residues SGAVALGLATIAADGSVLDTWFPAPELTDTPGTPGTERVFEPDAPAELSGLAGSDPDRGVEKVLVRTTIGSLEDKPVDAY DAYLRLHLLSHRLIQPHGASVDGLFGVLTNVVWTNFGPCAVEGFEAVRARLKARAGAHSSVTVFGIDKFPRMVDYVVPTG VRIADADRVRLGAHLAPGTTVMHEGFVNFNAGTLGASMVEGRISAGVVVGDGSDIGGGASIMGTLSGGGSQVISVGQRSL LGANSGLGISLGDDCIIEAGLYVTAGTKVATPDGKTIKALELSGANNLLFRRNSQTGAVEVVSRDGGAFELNAALHAN
Specific function: Unknown
COG id: COG2171
COG function: function code E; Tetrahydrodipicolinate N-succinyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.117
Molecular weight: Translated: 32646; Mature: 32515
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGAVALGLATIAADGSVLDTWFPAPELTDTPGTPGTERVFEPDAPAELSGLAGSDPDRG CCCCEEEEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHH VEKVLVRTTIGSLEDKPVDAYDAYLRLHLLSHRLIQPHGASVDGLFGVLTNVVWTNFGPC HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCH AVEGFEAVRARLKARAGAHSSVTVFGIDKFPRMVDYVVPTGVRIADADRVRLGAHLAPGT HHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCCEEEECCCCEEECCEECCCC TVMHEGFVNFNAGTLGASMVEGRISAGVVVGDGSDIGGGASIMGTLSGGGSQVISVGQRS EEEECCCEEECCCCCCHHHHCCCCCCEEEEECCCCCCCCEEEEEEECCCCHHHHHHCHHH LLGANSGLGISLGDDCIIEAGLYVTAGTKVATPDGKTIKALELSGANNLLFRRNSQTGAV HCCCCCCCEEEECCCEEEECCEEEEECCEEECCCCCEEEEEEECCCCCEEEEECCCCCEE EVVSRDGGAFELNAALHAN EEEECCCCEEEEEEEEECC >Mature Secondary Structure SGAVALGLATIAADGSVLDTWFPAPELTDTPGTPGTERVFEPDAPAELSGLAGSDPDRG CCCEEEEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHH VEKVLVRTTIGSLEDKPVDAYDAYLRLHLLSHRLIQPHGASVDGLFGVLTNVVWTNFGPC HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCH AVEGFEAVRARLKARAGAHSSVTVFGIDKFPRMVDYVVPTGVRIADADRVRLGAHLAPGT HHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCCEEEECCCCEEECCEECCCC TVMHEGFVNFNAGTLGASMVEGRISAGVVVGDGSDIGGGASIMGTLSGGGSQVISVGQRS EEEECCCEEECCCCCCHHHHCCCCCCEEEEECCCCCCCCEEEEEEECCCCHHHHHHCHHH LLGANSGLGISLGDDCIIEAGLYVTAGTKVATPDGKTIKALELSGANNLLFRRNSQTGAV HCCCCCCCEEEECCCEEEECCEEEEECCEEECCCCCEEEEEEECCCCCEEEEECCCCCEE EVVSRDGGAFELNAALHAN EEEECCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: succinyl-CoA; (R)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate; H2O
Specific reaction: succinyl-CoA + (R)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate + H2O = CoA + (R)-2-(succinylamino)-6-oxoheptanedioate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA