Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

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The map label for this gene is mshB [H]

Identifier: 169628296

GI number: 169628296

Start: 1217397

End: 1218266

Strand: Direct

Name: mshB [H]

Synonym: MAB_1203

Alternate gene names: 169628296

Gene position: 1217397-1218266 (Clockwise)

Preceding gene: 169628293

Following gene: 169628297

Centisome position: 24.03

GC content: 65.75

Gene sequence:

>870_bases
GTGACCGGATTGCGATTGATGGCGGTGCACGCCCACCCCGATGACGAGGCCAGTAAGGGCGCCGCCACCACGGCGCGGTA
TGCCGCCGAGGGCAACGAGGTCATGGTGGTGACCCTCACCGGCGGTGAACGCGGCGACATCCTGAACCCGGCCATGGACC
GTCCCGAGGTGGCCGCGAACATCGGTGCCATCCGCCGCGAGGAGATGGCCAAGGCCGCCGCCGAGCTCGGCGTGCGGCAC
CGCTGGCTGGGTTACGTGGATTCGGGACTGCCGCAGGGCGACCCGCTGCCCCCGTTGCCGTCGGATTCGTTCGCCCTGGT
GCCCATCGAGGAACCGATCGCCAAGCTGGTCGCGGTTGTCAGGGAGTTCCGCCCGCACGTCATGACGACCTACGACGAGA
ACGGCGGCTATCCGCATCCGGATCACATCCGGTGCCACGAGGTCTCGATGGCGGCCTTCGAGGCCGCGGCGGACCCGGAG
CAGTTTCCCGAGGCGGGTGAGCCGTGGACGGTCAGCAAGATCTATTACAACCACGGATTCATGCGAGCGCGTATGCAGTT
GCTCAATGACGAGTGCAAGAAGCACGGGTACAAGGGTCCGTTCGACGAATGGCTTGAGCGTTGGCCGGCCGATGACGACA
CCTTTGATCGCCGGGTGACCACGCGGGTGCCGTGCGCAGATTTCTTCGATGCCCGCGACGCGGCGCTGCGTGCGCATGCG
TCGCAAATCCCGCCCGACAGCAGCTTTTTCGCGGTCCCACGCGAGTTCGAGCGGAAATTGTGGCCCACCGAGGACTTCGA
GCTGGCGAAGTCACGCGTGCCGACGAGCACGCCCGAGGATGATCTGTTCGCAGGAGTTGAAACCAAATGA

Upstream 100 bases:

>100_bases
ACGGGTCAACGGTATGCCGGGTATACCCGAGATGAAACGATGGGGGAGGTGAGTCCTCTCCCGAGGGCAGTGAACGGACC
AGAAAGAGGCGGGCGCACGG

Downstream 100 bases:

>100_bases
TGTTGATGGACGCCGTGCTGGTGCTCGCCGACGAGAAGAGTCCGACCAATATCGGACCGGACTTCGGTAAGGCCGGTCCC
TTCGGTTTGACGGTGGTGGT

Product: LmbE-like protein

Products: NA

Alternate protein names: GlcNAc-Ins deacetylase; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [H]

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MTGLRLMAVHAHPDDEASKGAATTARYAAEGNEVMVVTLTGGERGDILNPAMDRPEVAANIGAIRREEMAKAAAELGVRH
RWLGYVDSGLPQGDPLPPLPSDSFALVPIEEPIAKLVAVVREFRPHVMTTYDENGGYPHPDHIRCHEVSMAAFEAAADPE
QFPEAGEPWTVSKIYYNHGFMRARMQLLNDECKKHGYKGPFDEWLERWPADDDTFDRRVTTRVPCADFFDARDAALRAHA
SQIPPDSSFFAVPREFERKLWPTEDFELAKSRVPTSTPEDDLFAGVETK

Sequences:

>Translated_289_residues
MTGLRLMAVHAHPDDEASKGAATTARYAAEGNEVMVVTLTGGERGDILNPAMDRPEVAANIGAIRREEMAKAAAELGVRH
RWLGYVDSGLPQGDPLPPLPSDSFALVPIEEPIAKLVAVVREFRPHVMTTYDENGGYPHPDHIRCHEVSMAAFEAAADPE
QFPEAGEPWTVSKIYYNHGFMRARMQLLNDECKKHGYKGPFDEWLERWPADDDTFDRRVTTRVPCADFFDARDAALRAHA
SQIPPDSSFFAVPREFERKLWPTEDFELAKSRVPTSTPEDDLFAGVETK
>Mature_288_residues
TGLRLMAVHAHPDDEASKGAATTARYAAEGNEVMVVTLTGGERGDILNPAMDRPEVAANIGAIRREEMAKAAAELGVRHR
WLGYVDSGLPQGDPLPPLPSDSFALVPIEEPIAKLVAVVREFRPHVMTTYDENGGYPHPDHIRCHEVSMAAFEAAADPEQ
FPEAGEPWTVSKIYYNHGFMRARMQLLNDECKKHGYKGPFDEWLERWPADDDTFDRRVTTRVPCADFFDARDAALRAHAS
QIPPDSSFFAVPREFERKLWPTEDFELAKSRVPTSTPEDDLFAGVETK

Specific function: Catalyzes the deacetylation of 1D-myo-inositol 2- acetamido-2-deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway [H]

COG id: COG2120

COG function: function code S; Uncharacterized proteins, LmbE homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MshB deacetylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003737
- InterPro:   IPR017810 [H]

Pfam domain/function: PF02585 PIG-L [H]

EC number: =3.5.1.103 [H]

Molecular weight: Translated: 32246; Mature: 32115

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGLRLMAVHAHPDDEASKGAATTARYAAEGNEVMVVTLTGGERGDILNPAMDRPEVAAN
CCCCEEEEEECCCCCCHHCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHH
IGAIRREEMAKAAAELGVRHRWLGYVDSGLPQGDPLPPLPSDSFALVPIEEPIAKLVAVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHH
REFRPHVMTTYDENGGYPHPDHIRCHEVSMAAFEAAADPEQFPEAGEPWTVSKIYYNHGF
HHHCCCEEEEEECCCCCCCCCCCEEHHHHHHHHHHCCCHHHCCCCCCCEEEEEEEECCCH
MRARMQLLNDECKKHGYKGPFDEWLERWPADDDTFDRRVTTRVPCADFFDARDAALRAHA
HHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHH
SQIPPDSSFFAVPREFERKLWPTEDFELAKSRVPTSTPEDDLFAGVETK
HCCCCCCCEEECCHHHHHHCCCCCHHHHHHHCCCCCCCCHHHCCCCCCC
>Mature Secondary Structure 
TGLRLMAVHAHPDDEASKGAATTARYAAEGNEVMVVTLTGGERGDILNPAMDRPEVAAN
CCCEEEEEECCCCCCHHCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHH
IGAIRREEMAKAAAELGVRHRWLGYVDSGLPQGDPLPPLPSDSFALVPIEEPIAKLVAVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECHHHHHHHHHHH
REFRPHVMTTYDENGGYPHPDHIRCHEVSMAAFEAAADPEQFPEAGEPWTVSKIYYNHGF
HHHCCCEEEEEECCCCCCCCCCCEEHHHHHHHHHHCCCHHHCCCCCCCEEEEEEEECCCH
MRARMQLLNDECKKHGYKGPFDEWLERWPADDDTFDRRVTTRVPCADFFDARDAALRAHA
HHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHH
SQIPPDSSFFAVPREFERKLWPTEDFELAKSRVPTSTPEDDLFAGVETK
HCCCCCCCEEECCHHHHHHCCCCCHHHHHHHCCCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA