Click here to switch to the map view.

The map label for this gene is lpqT [H]

Identifier: 169628238

GI number: 169628238

Start: 1160757

End: 1161401

Strand: Reverse

Name: lpqT [H]

Synonym: MAB_1145c

Alternate gene names: 169628238

Gene position: 1161401-1160757 (Counterclockwise)

Preceding gene: 169628240

Following gene: 169628237

Centisome position: 22.92

GC content: 66.36

Gene sequence:

>645_bases
ATGCGTAGCGCCGCGCTGGCGGCCGCAGCGGTGGCCGCATTCGCGATGATCGGATGCGGGAGTCACAACCCCGGGCAACC
CACCGGTTCCGCAAGCAGCACGCCAGAATCGGCGGCACCTCCCGCCAAGCCCGCGTCGATGAACGAGTACCTGCACAGCG
TCGGCGTCACGGTCACCCCGGTGTCACCGGAGAGCCCGGCTAATGTGCGGGTCGACGTACCACTACCCCAGGGCTGGGAG
AATCTGGGCGCACTCGACCCCGCCTATCTGATCGCCGACAAGCCCAGCGGTGCCGATCAGGGCCGAACGCCCAGCGCGGT
GGTCTATCTCATCAAACTGGGCGGCCCCTTGGATGCCCGCAAGGTCATCTCCGAACATGGATTCGCCGACGCGCAGAACA
CCCAGAACTTTCAGAAGATCGCCTCGTCCCTCGACGACTACCAGGGATACCCATCGGCTGCCATCGAAGGCACCTACGAG
AACCAGGGTGTGCGGGTGCACGCCTGGAACCGGGACGTGATCGTGCCCGATGGGCCGCTGCACTACCTGGTGCAGTTCAC
CGTGACGACCACCGAGGCCCAGTCCGCGGCGCTGTCCCAGGATGTCGCCGCGCTCACCGGCGGCCTGAAGATCACGAAGC
GCTGA

Upstream 100 bases:

>100_bases
CCGCCCGTCCAGCCGGCAGGGGGTCCCCGCGTGCTACCGAGGGTCGGCACCATCTGCGAGGTCTTCGAGAACGATTCGGT
GACAGCACTTCTCGGCCAGA

Downstream 100 bases:

>100_bases
AGCCGCTCAGCCTCTCGACGGTGATGGCCCCGACCGTTAGGGTCAGCTCCCGTGAGTAAGTCAACTGCCACATGGAGTGC
CGCCAAGCTGCCCTCATTCG

Product: putative lipoprotein LpqT precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MRSAALAAAAVAAFAMIGCGSHNPGQPTGSASSTPESAAPPAKPASMNEYLHSVGVTVTPVSPESPANVRVDVPLPQGWE
NLGALDPAYLIADKPSGADQGRTPSAVVYLIKLGGPLDARKVISEHGFADAQNTQNFQKIASSLDDYQGYPSAAIEGTYE
NQGVRVHAWNRDVIVPDGPLHYLVQFTVTTTEAQSAALSQDVAALTGGLKITKR

Sequences:

>Translated_214_residues
MRSAALAAAAVAAFAMIGCGSHNPGQPTGSASSTPESAAPPAKPASMNEYLHSVGVTVTPVSPESPANVRVDVPLPQGWE
NLGALDPAYLIADKPSGADQGRTPSAVVYLIKLGGPLDARKVISEHGFADAQNTQNFQKIASSLDDYQGYPSAAIEGTYE
NQGVRVHAWNRDVIVPDGPLHYLVQFTVTTTEAQSAALSQDVAALTGGLKITKR
>Mature_214_residues
MRSAALAAAAVAAFAMIGCGSHNPGQPTGSASSTPESAAPPAKPASMNEYLHSVGVTVTPVSPESPANVRVDVPLPQGWE
NLGALDPAYLIADKPSGADQGRTPSAVVYLIKLGGPLDARKVISEHGFADAQNTQNFQKIASSLDDYQGYPSAAIEGTYE
NQGVRVHAWNRDVIVPDGPLHYLVQFTVTTTEAQSAALSQDVAALTGGLKITKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019674 [H]

Pfam domain/function: PF10738 Lpp-LpqN [H]

EC number: NA

Molecular weight: Translated: 22234; Mature: 22234

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSAALAAAAVAAFAMIGCGSHNPGQPTGSASSTPESAAPPAKPASMNEYLHSVGVTVTP
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEE
VSPESPANVRVDVPLPQGWENLGALDPAYLIADKPSGADQGRTPSAVVYLIKLGGPLDAR
CCCCCCCCEEEECCCCCCHHHHCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCHHH
KVISEHGFADAQNTQNFQKIASSLDDYQGYPSAAIEGTYENQGVRVHAWNRDVIVPDGPL
HHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEECCCCEEECCCCE
HYLVQFTVTTTEAQSAALSQDVAALTGGLKITKR
EEEEEEEEEECHHHHHHHHHHHHHHHCCEEEECC
>Mature Secondary Structure
MRSAALAAAAVAAFAMIGCGSHNPGQPTGSASSTPESAAPPAKPASMNEYLHSVGVTVTP
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEE
VSPESPANVRVDVPLPQGWENLGALDPAYLIADKPSGADQGRTPSAVVYLIKLGGPLDAR
CCCCCCCCEEEECCCCCCHHHHCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCHHH
KVISEHGFADAQNTQNFQKIASSLDDYQGYPSAAIEGTYENQGVRVHAWNRDVIVPDGPL
HHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEECCCCEEECCCCE
HYLVQFTVTTTEAQSAALSQDVAALTGGLKITKR
EEEEEEEEEECHHHHHHHHHHHHHHHCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]