| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628215
Identifier: 169628215
GI number: 169628215
Start: 1132351
End: 1133895
Strand: Reverse
Name: 169628215
Synonym: MAB_1122c
Alternate gene names: NA
Gene position: 1133895-1132351 (Counterclockwise)
Preceding gene: 169628217
Following gene: 169628213
Centisome position: 22.38
GC content: 65.63
Gene sequence:
>1545_bases GTGACCGCGCCCGCAACCCTGCCGCCGACCTCGGCAGCCGAGTCGGATCTCCAGTCTCCCGGGCCCCGGATACCGCCCGC GGACTTCGGGCCCACCGACCGTTTCCGGGGCTGGGTGATGACCGCCGTCATCACAGCGATAGCGGCACTGACCCGGTTCA TCAACCTTGGCGCGCTCACCGATCGCGGCACTCCCGTCTTCGACGAGAAGCACTACGTGCCGCAGGGCTGGCAGGTCGTC ACCAACAACGGCGTCGAGGACAACCCCGGCTACGGGCTCGTGGTGCATCCGCCGATCGGCAAACAGATGATCGCCATCGG CGAATGGCTGTTCGGATACGACCCATTCGGCTGGCGGTTCGCGGCGGCCCTCTCGGGCACCATCCTGGTCATGCTGGTCG CCCGGATCGCGCGACGCATCAGCCGGTCCACCATGGTGGGCGCCATCGCCGGCGTGCTGCTGATCGCCGATGGCGTCAGC TTCGTCACCGCCCGCACCGCGCTGCTGGACGTGTATCAGGCGCTCTTCGTGGTGGCCGCCTTCGGCGCGCTGATCGTCGA CAGGGACCAGGTCCGGCAGCGCCTCTACAACGCGTATCTCGAGGGGCGCATCGGCGACACGCCGTGGGGCCCTCGCCTGG GTGTGCGCTGGTGGCGTTTCGGGGCCGGCATCCTGCTCGGATTGGCCTGCGGCACAAAGTGGTCGGGGCTGTACTTCATC GCATTCTTCGGCGTGCTATGCATCGCGTTCGATATCGCTGCACGCCGCGCCTACGGCGTGCAGCGCCCCTGGGCCGGTGC GGCGGTGCGCGATCTGGGCCCCGCCTTGTACGCACTACTGATCATCCCGTTCCTGGTGTATATGGCCTCGTACTGGTCGT GGTTCGCCTCCGAGACGGGCATCAACCGGCATGCCGAAGGTCGGCAGATCGGGGTCGGCGGATGGATGCCCGATGCCCTG CGCTCGCTCTGGTACTACACCCACAGCGTCTACACGTTCCATTCCACGCTGACCAACTCGAACGGCAACCACCATCCGTG GGAGTCCAAACCGTGGACCTGGCCGATGTCGCTGCGGCCGCTGCTGTACGCCATCGAGGACAAGAACATCTCCGGGTGCG GCACCAATTCCTGTGTGCGCGCGGTGTTGTTGGTCGGCACACCGGCAATCTGGTGGCTGGCGGTTCCGGTGCTGTTGTGG GCCACGTGGGCGACCGTGGTCCGCCGGGACTGGCGATACGCGGCGGCGCTCGTCGGCTATTGCGCGGGGTGGCTGCCCTG GTTCGCGAACATCGACCGGCAGATGTACTTCTTCTACGCCACGCCCATGGTGCCGTTCCTGGTGATGATGATCGCGTTCA TCATCGGTGACTTCCTGCGCAAGCCGACGGATAACCCGGAACGAAAGAAGTTGCGAATGTTCATCGCAACGTTCTATCTG GCGCTGGTGGTCACCAATTTCGCCTGGCTGTATCCGATCCTCACCGGTGCCGCCATCTCACCGTTCATGTGGAACATGGA GATGTGGCTGCCCAGCTGGCGCTGA
Upstream 100 bases:
>100_bases AGGCGTCCGCCGGCTCACCCAGCGGCGTCGCCGCCAGCAGCAAGTTCCCCATCCGGGCAGCTTAGATGGCCGAGCAGGCT CCTCCCCTACGATCGACCGT
Downstream 100 bases:
>100_bases CCCCTCCCCTGCGCCGACACGCCGTGACATGCCGAGCGCAGCGCGCAGAACACGGCGTGTCGGCCCGCAGTGACTAGAGC AGATCGCGTGAGACCGGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 514; Mature: 513
Protein sequence:
>514_residues MTAPATLPPTSAAESDLQSPGPRIPPADFGPTDRFRGWVMTAVITAIAALTRFINLGALTDRGTPVFDEKHYVPQGWQVV TNNGVEDNPGYGLVVHPPIGKQMIAIGEWLFGYDPFGWRFAAALSGTILVMLVARIARRISRSTMVGAIAGVLLIADGVS FVTARTALLDVYQALFVVAAFGALIVDRDQVRQRLYNAYLEGRIGDTPWGPRLGVRWWRFGAGILLGLACGTKWSGLYFI AFFGVLCIAFDIAARRAYGVQRPWAGAAVRDLGPALYALLIIPFLVYMASYWSWFASETGINRHAEGRQIGVGGWMPDAL RSLWYYTHSVYTFHSTLTNSNGNHHPWESKPWTWPMSLRPLLYAIEDKNISGCGTNSCVRAVLLVGTPAIWWLAVPVLLW ATWATVVRRDWRYAAALVGYCAGWLPWFANIDRQMYFFYATPMVPFLVMMIAFIIGDFLRKPTDNPERKKLRMFIATFYL ALVVTNFAWLYPILTGAAISPFMWNMEMWLPSWR
Sequences:
>Translated_514_residues MTAPATLPPTSAAESDLQSPGPRIPPADFGPTDRFRGWVMTAVITAIAALTRFINLGALTDRGTPVFDEKHYVPQGWQVV TNNGVEDNPGYGLVVHPPIGKQMIAIGEWLFGYDPFGWRFAAALSGTILVMLVARIARRISRSTMVGAIAGVLLIADGVS FVTARTALLDVYQALFVVAAFGALIVDRDQVRQRLYNAYLEGRIGDTPWGPRLGVRWWRFGAGILLGLACGTKWSGLYFI AFFGVLCIAFDIAARRAYGVQRPWAGAAVRDLGPALYALLIIPFLVYMASYWSWFASETGINRHAEGRQIGVGGWMPDAL RSLWYYTHSVYTFHSTLTNSNGNHHPWESKPWTWPMSLRPLLYAIEDKNISGCGTNSCVRAVLLVGTPAIWWLAVPVLLW ATWATVVRRDWRYAAALVGYCAGWLPWFANIDRQMYFFYATPMVPFLVMMIAFIIGDFLRKPTDNPERKKLRMFIATFYL ALVVTNFAWLYPILTGAAISPFMWNMEMWLPSWR >Mature_513_residues TAPATLPPTSAAESDLQSPGPRIPPADFGPTDRFRGWVMTAVITAIAALTRFINLGALTDRGTPVFDEKHYVPQGWQVVT NNGVEDNPGYGLVVHPPIGKQMIAIGEWLFGYDPFGWRFAAALSGTILVMLVARIARRISRSTMVGAIAGVLLIADGVSF VTARTALLDVYQALFVVAAFGALIVDRDQVRQRLYNAYLEGRIGDTPWGPRLGVRWWRFGAGILLGLACGTKWSGLYFIA FFGVLCIAFDIAARRAYGVQRPWAGAAVRDLGPALYALLIIPFLVYMASYWSWFASETGINRHAEGRQIGVGGWMPDALR SLWYYTHSVYTFHSTLTNSNGNHHPWESKPWTWPMSLRPLLYAIEDKNISGCGTNSCVRAVLLVGTPAIWWLAVPVLLWA TWATVVRRDWRYAAALVGYCAGWLPWFANIDRQMYFFYATPMVPFLVMMIAFIIGDFLRKPTDNPERKKLRMFIATFYLA LVVTNFAWLYPILTGAAISPFMWNMEMWLPSWR
Specific function: Unknown
COG id: COG1928
COG function: function code O; Dolichyl-phosphate-mannose--protein O-mannosyl transferase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 39 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003342 [H]
Pfam domain/function: PF02366 PMT [H]
EC number: NA
Molecular weight: Translated: 57561; Mature: 57429
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPATLPPTSAAESDLQSPGPRIPPADFGPTDRFRGWVMTAVITAIAALTRFINLGALT CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC DRGTPVFDEKHYVPQGWQVVTNNGVEDNPGYGLVVHPPIGKQMIAIGEWLFGYDPFGWRF CCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCHHH AAALSGTILVMLVARIARRISRSTMVGAIAGVLLIADGVSFVTARTALLDVYQALFVVAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH FGALIVDRDQVRQRLYNAYLEGRIGDTPWGPRLGVRWWRFGAGILLGLACGTKWSGLYFI HHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHH AFFGVLCIAFDIAARRAYGVQRPWAGAAVRDLGPALYALLIIPFLVYMASYWSWFASETG HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC INRHAEGRQIGVGGWMPDALRSLWYYTHSVYTFHSTLTNSNGNHHPWESKPWTWPMSLRP CCCCCCCCEECCCCCCHHHHHHHHHHHHHHHEEEHHHCCCCCCCCCCCCCCCCCCCCCCC LLYAIEDKNISGCGTNSCVRAVLLVGTPAIWWLAVPVLLWATWATVVRRDWRYAAALVGY CEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CAGWLPWFANIDRQMYFFYATPMVPFLVMMIAFIIGDFLRKPTDNPERKKLRMFIATFYL HHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ALVVTNFAWLYPILTGAAISPFMWNMEMWLPSWR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TAPATLPPTSAAESDLQSPGPRIPPADFGPTDRFRGWVMTAVITAIAALTRFINLGALT CCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC DRGTPVFDEKHYVPQGWQVVTNNGVEDNPGYGLVVHPPIGKQMIAIGEWLFGYDPFGWRF CCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCHHH AAALSGTILVMLVARIARRISRSTMVGAIAGVLLIADGVSFVTARTALLDVYQALFVVAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH FGALIVDRDQVRQRLYNAYLEGRIGDTPWGPRLGVRWWRFGAGILLGLACGTKWSGLYFI HHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHH AFFGVLCIAFDIAARRAYGVQRPWAGAAVRDLGPALYALLIIPFLVYMASYWSWFASETG HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC INRHAEGRQIGVGGWMPDALRSLWYYTHSVYTFHSTLTNSNGNHHPWESKPWTWPMSLRP CCCCCCCCEECCCCCCHHHHHHHHHHHHHHHEEEHHHCCCCCCCCCCCCCCCCCCCCCCC LLYAIEDKNISGCGTNSCVRAVLLVGTPAIWWLAVPVLLWATWATVVRRDWRYAAALVGY CEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CAGWLPWFANIDRQMYFFYATPMVPFLVMMIAFIIGDFLRKPTDNPERKKLRMFIATFYL HHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ALVVTNFAWLYPILTGAAISPFMWNMEMWLPSWR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]