| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169628213
Identifier: 169628213
GI number: 169628213
Start: 1130407
End: 1131009
Strand: Reverse
Name: 169628213
Synonym: MAB_1120c
Alternate gene names: NA
Gene position: 1131009-1130407 (Counterclockwise)
Preceding gene: 169628215
Following gene: 169628211
Centisome position: 22.32
GC content: 67.0
Gene sequence:
>603_bases GTGACACACGCGGTTCAAGCATCACTGTTCGGCGCACCGCCGGTCCCGCGCCGCGAGCTGGCCGGCGGCGCATGGCTTGA GGTGCACCACGAATGGCTCGGGCGTGCGGACAATCTGATGGGCCAGTTGCTGGCACAGGTGCCCTGGCGAGCCGAGCGGC GCCGCATGTACGACCGCACCCTCGACGTGCCCCGCCTGGTCAGCTTCCACGACCTGACCTCGGGACCGCCACCGCATCCG GTGCTGGAAACCATCTGCGACCGCCTCAATGGCGAGTACACCGATGAACTCGGCGAGCCGTTTACCACCGTGGGCCTATG CCAGTACCGCGACGGCACCGACAGCGTCGCCTGGCACGGCGACACCATCGGCCGCGGCCTGCGTGAAGACACCATGGTCG CGATCGTAAGCATCGGCGCCACACGAACTTTCGCCCTGCGACCACGACTCGGCGGCGAATCGATCCGCATCAATATCGGA CACGGCGATCTGTTGGTGATGGGCGGCTCGTGCCAACGGACGTGGGAGCACGCCATCCCGAAAACGTCTAAGCCGGTGGG CCCCCGGATCAGCCTGCAGTACCGGCCTCGCGACGTGCGTTAG
Upstream 100 bases:
>100_bases AGCCGTCCCACCTCCGAATTGGCACCCAGTACAGGGACATCCGTCATGAGAAGACGTTAGCTTGCCGCGCAATCGAACGT ATGTGCGATACCATGTGGGT
Downstream 100 bases:
>100_bases GAGCGCACCGCCGCAACCGCCTTGACCAGCAGATCGGAGGCACGCTTACCGTCGGGCATGGCGGGCGGAACTTTTCCGAC GGCGATGGGACTTACCGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: 2OG-Fe(II) Oxygenase; DNA-N1-Methyladenine Dioxygenase; DNA Repair System Specific For Alkylated DNA; 2OG-Fe(II) Oxygenase Superfamily Protein; Oxidoreductase 2OG-Fe(II) Oxygenase Family; 2OG-Fe(II) Oxygenase Family Oxidoreductase; Oxidoreductase 2OG-Fe(II) Oxygenase Family Protein; CRISPR-Associated Family Protein; DNA Repair System Specific For Alkylated DNA Protein; 2OG-Fe(II) Oxygenase Family Protein; LOW QUALITY PROTEIN Alkylated DNA Repair Protein; DNA Repair System Protein; Alkylated DNA Repair Protein-Like Protein
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MTHAVQASLFGAPPVPRRELAGGAWLEVHHEWLGRADNLMGQLLAQVPWRAERRRMYDRTLDVPRLVSFHDLTSGPPPHP VLETICDRLNGEYTDELGEPFTTVGLCQYRDGTDSVAWHGDTIGRGLREDTMVAIVSIGATRTFALRPRLGGESIRINIG HGDLLVMGGSCQRTWEHAIPKTSKPVGPRISLQYRPRDVR
Sequences:
>Translated_200_residues MTHAVQASLFGAPPVPRRELAGGAWLEVHHEWLGRADNLMGQLLAQVPWRAERRRMYDRTLDVPRLVSFHDLTSGPPPHP VLETICDRLNGEYTDELGEPFTTVGLCQYRDGTDSVAWHGDTIGRGLREDTMVAIVSIGATRTFALRPRLGGESIRINIG HGDLLVMGGSCQRTWEHAIPKTSKPVGPRISLQYRPRDVR >Mature_199_residues THAVQASLFGAPPVPRRELAGGAWLEVHHEWLGRADNLMGQLLAQVPWRAERRRMYDRTLDVPRLVSFHDLTSGPPPHPV LETICDRLNGEYTDELGEPFTTVGLCQYRDGTDSVAWHGDTIGRGLREDTMVAIVSIGATRTFALRPRLGGESIRINIGH GDLLVMGGSCQRTWEHAIPKTSKPVGPRISLQYRPRDVR
Specific function: Unknown
COG id: COG3145
COG function: function code L; Alkylated DNA repair protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI21040275, Length=185, Percent_Identity=32.972972972973, Blast_Score=89, Evalue=2e-18, Organism=Homo sapiens, GI224451107, Length=219, Percent_Identity=29.2237442922374, Blast_Score=68, Evalue=6e-12, Organism=Homo sapiens, GI48717226, Length=219, Percent_Identity=29.2237442922374, Blast_Score=68, Evalue=6e-12, Organism=Homo sapiens, GI224451103, Length=219, Percent_Identity=29.2237442922374, Blast_Score=68, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22306; Mature: 22175
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHAVQASLFGAPPVPRRELAGGAWLEVHHEWLGRADNLMGQLLAQVPWRAERRRMYDRT CCCCCCCCCCCCCCCCHHHHCCCHHEEHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHH LDVPRLVSFHDLTSGPPPHPVLETICDRLNGEYTDELGEPFTTVGLCQYRDGTDSVAWHG CCCCHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCEEEEEEEECCCCCCEEECC DTIGRGLREDTMVAIVSIGATRTFALRPRLGGESIRINIGHGDLLVMGGSCQRTWEHAIP HHHHCCCCCCCEEEEEEECCCEEEEECCCCCCCEEEEEECCCCEEEECCCCHHHHHHCCC KTSKPVGPRISLQYRPRDVR CCCCCCCCEEEEEECCCCCC >Mature Secondary Structure THAVQASLFGAPPVPRRELAGGAWLEVHHEWLGRADNLMGQLLAQVPWRAERRRMYDRT CCCCCCCCCCCCCCCHHHHCCCHHEEHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHH LDVPRLVSFHDLTSGPPPHPVLETICDRLNGEYTDELGEPFTTVGLCQYRDGTDSVAWHG CCCCHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHCCCCEEEEEEEECCCCCCEEECC DTIGRGLREDTMVAIVSIGATRTFALRPRLGGESIRINIGHGDLLVMGGSCQRTWEHAIP HHHHCCCCCCCEEEEEEECCCEEEEECCCCCCCEEEEEECCCCEEEECCCCHHHHHHCCC KTSKPVGPRISLQYRPRDVR CCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA