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The map label for this gene is glnR [H]

Identifier: 169627845

GI number: 169627845

Start: 744288

End: 745094

Strand: Direct

Name: glnR [H]

Synonym: MAB_0744

Alternate gene names: 169627845

Gene position: 744288-745094 (Clockwise)

Preceding gene: 169627839

Following gene: 169627846

Centisome position: 14.69

GC content: 67.29

Gene sequence:

>807_bases
GTGTTGGAGGGCTCGTTGGACCTGTTGCTGTTGACCGCTGACCCAAATCCCGATGGGGTGCTGCCGTCCCTGTCGCTGCT
GGCCCATACCGTGCGACCGGTACCCAGCGAGGTGTCCTCGCTGTTAGAGGCGGGCGCCGCAGACGTGGCCATCGTCGATG
CCCGCACCGATCTGGCCTCCGCGCGGGGGCTGTGCCGGCTGCTCGGCGCGGCCGGGTCGTCGGTTCCCGTGGTCGCTGTG
GTCAACGAGGGCAGCCTGGTGGCGGTCAACGTCGACTGGGGTCTGGACGACATCCTGCTGCCCGGAACGGGCCCTGCCGA
GATCGATGCCCGGCTGCGCCTGCTGGTGGGCCGTCGCGCGGGTGCGGTCAACGTCGAGAACGCCAGCAAGGTGGTACTCG
GTGAACTGGTCATCGATGAGGGCACCTACACCGCGCGCCTACGCGGCCGCCCGCTTGATCTCACCTACAAGGAATTCGAG
CTGCTGAAGTATCTGGCGCAGCACGCCGGCCGCGTTTTCACCAGGGCTCAGCTGCTGCAAGAGGTCTGGGGATACGACTT
CTTCGGCGGTACACGCACCGTGGATGTGCACGTGCGACGGCTGCGCGCGAAGTTGGGCGGTGAATACGAATCGTTGATCG
GCACCGTACGCAACGTCGGCTACAAGGCGGTGCGCCCGCCGCGCGCCAAGGGCGAGCCCGGCCCGTCCGCGGCCGATGAC
GACGACGAGTCCGATATCGACGATCTTGACGACGACGGTACCGATCAGGACATCGCCTCCGAACCGGGGGCGATCAACGC
GGGGTGA

Upstream 100 bases:

>100_bases
CTCCCGACAGGCCCCGCCGATGCTCACACGAGCGGCTCATCCGCGCTTACCAGCAGGTGGCGCGGTACATTATGGAACAC
CTGGAGACCGAAGCACCCGG

Downstream 100 bases:

>100_bases
ATCTCCGACTAGCGTTGGCGGTATGACCGAATGGGTCCCGCTTCTCGATAATCGGCGCCAACTACAGATCCGCGAGTTGA
TTGTCGAGGCCACCCGCGCC

Product: transcriptional regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MLEGSLDLLLLTADPNPDGVLPSLSLLAHTVRPVPSEVSSLLEAGAADVAIVDARTDLASARGLCRLLGAAGSSVPVVAV
VNEGSLVAVNVDWGLDDILLPGTGPAEIDARLRLLVGRRAGAVNVENASKVVLGELVIDEGTYTARLRGRPLDLTYKEFE
LLKYLAQHAGRVFTRAQLLQEVWGYDFFGGTRTVDVHVRRLRAKLGGEYESLIGTVRNVGYKAVRPPRAKGEPGPSAADD
DDESDIDDLDDDGTDQDIASEPGAINAG

Sequences:

>Translated_268_residues
MLEGSLDLLLLTADPNPDGVLPSLSLLAHTVRPVPSEVSSLLEAGAADVAIVDARTDLASARGLCRLLGAAGSSVPVVAV
VNEGSLVAVNVDWGLDDILLPGTGPAEIDARLRLLVGRRAGAVNVENASKVVLGELVIDEGTYTARLRGRPLDLTYKEFE
LLKYLAQHAGRVFTRAQLLQEVWGYDFFGGTRTVDVHVRRLRAKLGGEYESLIGTVRNVGYKAVRPPRAKGEPGPSAADD
DDESDIDDLDDDGTDQDIASEPGAINAG
>Mature_268_residues
MLEGSLDLLLLTADPNPDGVLPSLSLLAHTVRPVPSEVSSLLEAGAADVAIVDARTDLASARGLCRLLGAAGSSVPVVAV
VNEGSLVAVNVDWGLDDILLPGTGPAEIDARLRLLVGRRAGAVNVENASKVVLGELVIDEGTYTARLRGRPLDLTYKEFE
LLKYLAQHAGRVFTRAQLLQEVWGYDFFGGTRTVDVHVRRLRAKLGGEYESLIGTVRNVGYKAVRPPRAKGEPGPSAADD
DDESDIDDLDDDGTDQDIASEPGAINAG

Specific function: Activates the transcription of the glnA gene [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786784, Length=181, Percent_Identity=32.5966850828729, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1786599, Length=130, Percent_Identity=36.1538461538462, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1788394, Length=163, Percent_Identity=33.1288343558282, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI87082012, Length=135, Percent_Identity=36.2962962962963, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1790860, Length=184, Percent_Identity=34.2391304347826, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1789402, Length=208, Percent_Identity=29.3269230769231, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1789809, Length=170, Percent_Identity=28.8235294117647, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI2367329, Length=160, Percent_Identity=31.25, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1790552, Length=187, Percent_Identity=30.4812834224599, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 28343; Mature: 28343

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEGSLDLLLLTADPNPDGVLPSLSLLAHTVRPVPSEVSSLLEAGAADVAIVDARTDLAS
CCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCHHHHH
ARGLCRLLGAAGSSVPVVAVVNEGSLVAVNVDWGLDDILLPGTGPAEIDARLRLLVGRRA
HHHHHHHHHCCCCCCCEEEEECCCCEEEEEECCCCCCEEECCCCCHHHHHHHHEEECCCC
GAVNVENASKVVLGELVIDEGTYTARLRGRPLDLTYKEFELLKYLAQHAGRVFTRAQLLQ
CEEECCCCCEEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EVWGYDFFGGTRTVDVHVRRLRAKLGGEYESLIGTVRNVGYKAVRPPRAKGEPGPSAADD
HHHCCCCCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
DDESDIDDLDDDGTDQDIASEPGAINAG
CCCCCCCCCCCCCCCCHHHCCCCCCCCC
>Mature Secondary Structure
MLEGSLDLLLLTADPNPDGVLPSLSLLAHTVRPVPSEVSSLLEAGAADVAIVDARTDLAS
CCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCHHHHH
ARGLCRLLGAAGSSVPVVAVVNEGSLVAVNVDWGLDDILLPGTGPAEIDARLRLLVGRRA
HHHHHHHHHCCCCCCCEEEEECCCCEEEEEECCCCCCEEECCCCCHHHHHHHHEEECCCC
GAVNVENASKVVLGELVIDEGTYTARLRGRPLDLTYKEFELLKYLAQHAGRVFTRAQLLQ
CEEECCCCCEEEEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EVWGYDFFGGTRTVDVHVRRLRAKLGGEYESLIGTVRNVGYKAVRPPRAKGEPGPSAADD
HHHCCCCCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
DDESDIDDLDDDGTDQDIASEPGAINAG
CCCCCCCCCCCCCCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7688332; 12000953 [H]