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The map label for this gene is araC [C]

Identifier: 169627839

GI number: 169627839

Start: 740133

End: 741002

Strand: Direct

Name: araC [C]

Synonym: MAB_0738

Alternate gene names: 169627839

Gene position: 740133-741002 (Clockwise)

Preceding gene: 169627837

Following gene: 169627845

Centisome position: 14.61

GC content: 68.16

Gene sequence:

>870_bases
GTGCCGTCTTGGACCAACCCGACAGAACCACGGGAGGGCCTAGGTGCGGATCCGTGGCGCGCAGTAGTGCGTCCCGAAGG
GCTGTTGCCGCGAATCGATCGAGTGGTGCTGCCGGGTCGCGGACCACTGCGCGATTGGGTGGAAAGGATTTGGTCGCTCT
CCTGGGCCGAACCCGTACCGGCGGACTTCTCCGGTGTCATCGCCCACCCGACGGTACATCTCACGCTTGAGGGCGGGCCG
CCGGGCGAGATTCGGCACGGGCATCGGCTTCCGGCCGGACTGCTGCACGGGGTGGTGACCGAGAGATTTGCCGTCGATCT
GCCGGCACCCGGCTGGGTGGTCGGCTTGCATCTCAGGCCGGGAGCGATCTTCGACCTAACCGGCACCGAGGCCAGCACGT
GGACGGGTCGAGTGGTTCCCTGGGACCAGGCCTGGCCGGGCTGGGATCTGACGGCGGTATGGGAGGCGTGCGACGCGCGG
GCTCGTGCCGAGGCAATCGAGAGGGCGGCACAAGAGATGTTGGGCGGTCGGCGGCCGACCGCCGACGGTCACCGTGCTCG
CAGCGTCGAACGGTTGGTACGTACCGATCCGAGCATCGCATCGGTGGCGGATCTCGCCGCGAGGGCGGCGCTGTCCCAGC
GCTCATTGCAGCGGTTGTGTCGCAGCCACCTCGGAGTATCGCCACGCTGGCTGCTGCGGCGGGCTCGAGTGATCGATGCT
CACCAGCTGCTTTCCGAGACCGATCTCGACGTCGCGGAGGTGGCGAGCCGGTTGGGCTGGTACGACCAGGCACATCTCAC
CCGCGACTACACCAAGCTGACAGGCACACCTCCGGTGCGGCTGCGCCAGGAACGGCGCGAAGGCCGCTAA

Upstream 100 bases:

>100_bases
TAGAAACGGGCCAGTCTGGAGGCGTCGGAGCAATCGATGGTGAACGCAAGCAGTTGGGTAACAGCAGTACTCATGTGCTC
AGGCTGCCTAAGCTGAGGCG

Downstream 100 bases:

>100_bases
ACGACAAGACCGCAACTGCGCACGTCGTTCTCCGGGTGGGAGGTGCGCAGTCGCGGTCTCGACGAAGAGGCCTAGGCCAC
TCAGCTTTCGATCTTGATGT

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Helix-Turn-Helix Domain-/AraC Domain-Containing Protein; Helix-Turn-Helix Domain-Containing Protein; AraC Family Transcription Regulator; Helix-Turn-Helix AraC Domain-Containing Protein; Helix-Turn-Helix AraC Domain Protein; Regulator; Transcriptional Regulator

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MPSWTNPTEPREGLGADPWRAVVRPEGLLPRIDRVVLPGRGPLRDWVERIWSLSWAEPVPADFSGVIAHPTVHLTLEGGP
PGEIRHGHRLPAGLLHGVVTERFAVDLPAPGWVVGLHLRPGAIFDLTGTEASTWTGRVVPWDQAWPGWDLTAVWEACDAR
ARAEAIERAAQEMLGGRRPTADGHRARSVERLVRTDPSIASVADLAARAALSQRSLQRLCRSHLGVSPRWLLRRARVIDA
HQLLSETDLDVAEVASRLGWYDQAHLTRDYTKLTGTPPVRLRQERREGR

Sequences:

>Translated_289_residues
MPSWTNPTEPREGLGADPWRAVVRPEGLLPRIDRVVLPGRGPLRDWVERIWSLSWAEPVPADFSGVIAHPTVHLTLEGGP
PGEIRHGHRLPAGLLHGVVTERFAVDLPAPGWVVGLHLRPGAIFDLTGTEASTWTGRVVPWDQAWPGWDLTAVWEACDAR
ARAEAIERAAQEMLGGRRPTADGHRARSVERLVRTDPSIASVADLAARAALSQRSLQRLCRSHLGVSPRWLLRRARVIDA
HQLLSETDLDVAEVASRLGWYDQAHLTRDYTKLTGTPPVRLRQERREGR
>Mature_288_residues
PSWTNPTEPREGLGADPWRAVVRPEGLLPRIDRVVLPGRGPLRDWVERIWSLSWAEPVPADFSGVIAHPTVHLTLEGGPP
GEIRHGHRLPAGLLHGVVTERFAVDLPAPGWVVGLHLRPGAIFDLTGTEASTWTGRVVPWDQAWPGWDLTAVWEACDARA
RAEAIERAAQEMLGGRRPTADGHRARSVERLVRTDPSIASVADLAARAALSQRSLQRLCRSHLGVSPRWLLRRARVIDAH
QLLSETDLDVAEVASRLGWYDQAHLTRDYTKLTGTPPVRLRQERREGR

Specific function: This Protein Controls The Expression Of At Least Six Genes That Are Involved In The Transport And Catabolism Of L-Arabinose. It Regulates Initiation Of Transcription Of The Arabad Operon And It Also Controls Its Own Synthesis. The L- Arabinose Operon Dis

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32121; Mature: 31990

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSWTNPTEPREGLGADPWRAVVRPEGLLPRIDRVVLPGRGPLRDWVERIWSLSWAEPVP
CCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCC
ADFSGVIAHPTVHLTLEGGPPGEIRHGHRLPAGLLHGVVTERFAVDLPAPGWVVGLHLRP
CCCCCEEECCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCEEEEEEECC
GAIFDLTGTEASTWTGRVVPWDQAWPGWDLTAVWEACDARARAEAIERAAQEMLGGRRPT
CEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
ADGHRARSVERLVRTDPSIASVADLAARAALSQRSLQRLCRSHLGVSPRWLLRRARVIDA
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
HQLLSETDLDVAEVASRLGWYDQAHLTRDYTKLTGTPPVRLRQERREGR
HHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
PSWTNPTEPREGLGADPWRAVVRPEGLLPRIDRVVLPGRGPLRDWVERIWSLSWAEPVP
CCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCC
ADFSGVIAHPTVHLTLEGGPPGEIRHGHRLPAGLLHGVVTERFAVDLPAPGWVVGLHLRP
CCCCCEEECCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCEEEEEEECC
GAIFDLTGTEASTWTGRVVPWDQAWPGWDLTAVWEACDARARAEAIERAAQEMLGGRRPT
CEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
ADGHRARSVERLVRTDPSIASVADLAARAALSQRSLQRLCRSHLGVSPRWLLRRARVIDA
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
HQLLSETDLDVAEVASRLGWYDQAHLTRDYTKLTGTPPVRLRQERREGR
HHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA