| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627603
Identifier: 169627603
GI number: 169627603
Start: 496789
End: 497349
Strand: Direct
Name: 169627603
Synonym: MAB_0499
Alternate gene names: NA
Gene position: 496789-497349 (Clockwise)
Preceding gene: 169627601
Following gene: 169627607
Centisome position: 9.8
GC content: 67.2
Gene sequence:
>561_bases GTGTCGTATCACCATGGCGATCTGCGAGCAGCGATACTGACGAGCGCCGCCGACATGGTGGCCCGGCGCGGCGCCACCGA GTTGTCCCTGCGGGAGTTGGCCCGCGAAGCGGGTGTCTCGCATGCCGCACCCGCGCACCACTTTGGCGACCGCCGCGGGT TGTTCACGGCATTGGCCGCCGATGGGTTCACGCGACTGGCCGATGCGCTCGATGGCGCCCATCCCGACTTTCATGCCGCG GCCCTGGCCTACGTTGAGTTCGCATTGGCCAATCCGGGCCACTATTCCGTGATGTTCGAACCGGCGCTGCTGGATTTGGC CGATGGACGGCTGGCCGAGGCGCGCGACCGTGCCGCCGCCGCCCTGGACTCCGGGATCGCGACACTGACACCGCAGCAGA CATCGGCCGACAGGATCACCGCCGCGCGTGCGGCGTGGTCCTTGGTGCATGGGTTCGTATCGTTGTGGACCACGGGGGCG CTTGCTGATTCACGCGATGACGCCGATCCGCTGCGCATCGCGTCGCAGATCGCTTACGTGTTGTTTCCCGAGGCTGGTTA G
Upstream 100 bases:
>100_bases GGCGATGAGCGGAGCCATGATTGCCCTCCGATCTTGACAGTGGCTAGATTGACGGTACTCGATATCTAGCCACTGTCAAG ATTCTGGTTATGCTGGTGCT
Downstream 100 bases:
>100_bases CCCAGAACGACTTTCGCTCCCTTGGAGCTGTAGCCGCTGTGTAGATCGATTTCCTTGGGCACAGTGCCCCGCGGCACGTC GTAGACGAGCACCGACCTTT
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; TetR-Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcription Regulator TetR Family Protein; Transcriptional Regulatory Protein; Transcriptional Regulator TetR-Family; TetR-Family Protein Transcriptional Regulator
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MSYHHGDLRAAILTSAADMVARRGATELSLRELAREAGVSHAAPAHHFGDRRGLFTALAADGFTRLADALDGAHPDFHAA ALAYVEFALANPGHYSVMFEPALLDLADGRLAEARDRAAAALDSGIATLTPQQTSADRITAARAAWSLVHGFVSLWTTGA LADSRDDADPLRIASQIAYVLFPEAG
Sequences:
>Translated_186_residues MSYHHGDLRAAILTSAADMVARRGATELSLRELAREAGVSHAAPAHHFGDRRGLFTALAADGFTRLADALDGAHPDFHAA ALAYVEFALANPGHYSVMFEPALLDLADGRLAEARDRAAAALDSGIATLTPQQTSADRITAARAAWSLVHGFVSLWTTGA LADSRDDADPLRIASQIAYVLFPEAG >Mature_185_residues SYHHGDLRAAILTSAADMVARRGATELSLRELAREAGVSHAAPAHHFGDRRGLFTALAADGFTRLADALDGAHPDFHAAA LAYVEFALANPGHYSVMFEPALLDLADGRLAEARDRAAAALDSGIATLTPQQTSADRITAARAAWSLVHGFVSLWTTGAL ADSRDDADPLRIASQIAYVLFPEAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19631; Mature: 19500
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYHHGDLRAAILTSAADMVARRGATELSLRELAREAGVSHAAPAHHFGDRRGLFTALAA CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHH DGFTRLADALDGAHPDFHAAALAYVEFALANPGHYSVMFEPALLDLADGRLAEARDRAAA HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCCHHHHHHHHHH ALDSGIATLTPQQTSADRITAARAAWSLVHGFVSLWTTGALADSRDDADPLRIASQIAYV HHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH LFPEAG EECCCC >Mature Secondary Structure SYHHGDLRAAILTSAADMVARRGATELSLRELAREAGVSHAAPAHHFGDRRGLFTALAA CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHH DGFTRLADALDGAHPDFHAAALAYVEFALANPGHYSVMFEPALLDLADGRLAEARDRAAA HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCCHHHHHHHHHH ALDSGIATLTPQQTSADRITAARAAWSLVHGFVSLWTTGALADSRDDADPLRIASQIAYV HHHCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH LFPEAG EECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA