| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169627363
Identifier: 169627363
GI number: 169627363
Start: 260416
End: 261498
Strand: Reverse
Name: 169627363
Synonym: MAB_0258c
Alternate gene names: NA
Gene position: 261498-260416 (Counterclockwise)
Preceding gene: 169627364
Following gene: 169627362
Centisome position: 5.16
GC content: 62.88
Gene sequence:
>1083_bases ATGAGTGATAAGTATCCCGTCATCGTTTGGGGCACAGGAGTTGTCGGCAAGCTGGTAATCCGCGAATTACTGGACCATCC GGTCTTCGAGCTGGCGGCGGTACTGGTCCACGATCCGGCCAAGGACGGGGTGGACGTCGGAACCCTGGTTGGCAGTCACC CAACCGGGCTGGCCGCCACCACCGATATCGATGCCGCGCTGGGCACCGAGGGCACTGTCGCGTACTTCGGCCCGACCGCG CAGTACGCGTTGGAGAACATCGACAACATGTCCCGCGCATTACGCAGCGGGCATAACATCGTCTCCACCGCCATGACACC GTGGGTGTACCCGCAGGTCTGTCCGCCCGAGATGCTCGCCGACATCCAGCACGCGTGCGAGGCGGGGCAGACCTCCTGCT TCACCACCGGCATCGATCCGGGCTTCGCCAACGACCTGTTCCCGATGACCCTGCTCGGCGTGGGCGGACGGGTGGATTCT GTTCTGGTACAAGAACTTCTGGACTACCAGTACTACAACGGCGATTTCAGTACCCCGATGGGGCTGGGCGCCCCCATGGA CCAACCGGCGGTGCTGGAGATCCCTGAGGTACTGATCCTGGCCTGGGGCCACACCATCCCCATGATCGCCGACGCCGTGG GGGTCAAACTCGACAAGATAGATACCGTCTACGAAAAGTGGGCTACACCAACAGAGATCAGCTACGGGTCCGCGCCAAAC ACCGGCACCATTCCCGCGGGGCATTGTGCTGCCGTCCGCTTCGAGATCCGTGGCTGGGTGGGTGGCGAGCCCAAAATCGT CATCGAACACGTGAACCGTATTACCAACGACACCGCGCCGCAGTGGCCGCGGGCGCAGTCCGTGGACAACGACGCGTACC GAATCGAGATCAAGGGCAGCCCCAACATCACCCAAGAGACCGTCTTCCGGGACGAGCGCTCCGGAGACGGCGCCATCGGC GGATGCCTGGCTACCGGAATGCGGGCGATCAACGCAATACCTGCGGTTATCGACGCTAAGCCGGGCTTTCTGACGCCACT GGATCTTCCGCTGATCGCGGGCAGGGGCACGATCCGCATTTGA
Upstream 100 bases:
>100_bases TTCGTGTCGGACCGAGCCCGAATGGTGACCGGGCAGACCCTATTCGTCAATGGTGGCGAGTTTTTCCGATGAGCGCTTGC GCGAAGAGAGTGAGCAGAGC
Downstream 100 bases:
>100_bases CCTGCATGGAGCCTCGGTCTCCCCGGGTATCGAGCTGATCCCGTCCGCGAAAAGTCGAGCTCCTACGCTTGCAATCAGCG CCCATGTAGCAAATGATGAA
Product: putative dihydropicolinate reductase
Products: NA
Alternate protein names: Dihydrodipicolinate Reductase N-Terminus Domain Protein; Oxidoreductase; Dihydrodipicolinate Reductase-Like Protein; (2r 4S)-2 4-Diaminopentanoate Dehydrogenase; Dihydropicolinate Reductase
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MSDKYPVIVWGTGVVGKLVIRELLDHPVFELAAVLVHDPAKDGVDVGTLVGSHPTGLAATTDIDAALGTEGTVAYFGPTA QYALENIDNMSRALRSGHNIVSTAMTPWVYPQVCPPEMLADIQHACEAGQTSCFTTGIDPGFANDLFPMTLLGVGGRVDS VLVQELLDYQYYNGDFSTPMGLGAPMDQPAVLEIPEVLILAWGHTIPMIADAVGVKLDKIDTVYEKWATPTEISYGSAPN TGTIPAGHCAAVRFEIRGWVGGEPKIVIEHVNRITNDTAPQWPRAQSVDNDAYRIEIKGSPNITQETVFRDERSGDGAIG GCLATGMRAINAIPAVIDAKPGFLTPLDLPLIAGRGTIRI
Sequences:
>Translated_360_residues MSDKYPVIVWGTGVVGKLVIRELLDHPVFELAAVLVHDPAKDGVDVGTLVGSHPTGLAATTDIDAALGTEGTVAYFGPTA QYALENIDNMSRALRSGHNIVSTAMTPWVYPQVCPPEMLADIQHACEAGQTSCFTTGIDPGFANDLFPMTLLGVGGRVDS VLVQELLDYQYYNGDFSTPMGLGAPMDQPAVLEIPEVLILAWGHTIPMIADAVGVKLDKIDTVYEKWATPTEISYGSAPN TGTIPAGHCAAVRFEIRGWVGGEPKIVIEHVNRITNDTAPQWPRAQSVDNDAYRIEIKGSPNITQETVFRDERSGDGAIG GCLATGMRAINAIPAVIDAKPGFLTPLDLPLIAGRGTIRI >Mature_359_residues SDKYPVIVWGTGVVGKLVIRELLDHPVFELAAVLVHDPAKDGVDVGTLVGSHPTGLAATTDIDAALGTEGTVAYFGPTAQ YALENIDNMSRALRSGHNIVSTAMTPWVYPQVCPPEMLADIQHACEAGQTSCFTTGIDPGFANDLFPMTLLGVGGRVDSV LVQELLDYQYYNGDFSTPMGLGAPMDQPAVLEIPEVLILAWGHTIPMIADAVGVKLDKIDTVYEKWATPTEISYGSAPNT GTIPAGHCAAVRFEIRGWVGGEPKIVIEHVNRITNDTAPQWPRAQSVDNDAYRIEIKGSPNITQETVFRDERSGDGAIGG CLATGMRAINAIPAVIDAKPGFLTPLDLPLIAGRGTIRI
Specific function: Unknown
COG id: COG3804
COG function: function code S; Uncharacterized conserved protein related to dihydrodipicolinate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38386; Mature: 38255
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKYPVIVWGTGVVGKLVIRELLDHPVFELAAVLVHDPAKDGVDVGTLVGSHPTGLAAT CCCCCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHEECCCCCCCEEE TDIDAALGTEGTVAYFGPTAQYALENIDNMSRALRSGHNIVSTAMTPWVYPQVCPPEMLA CCCHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCEEHHHCCCCCCCCCCCHHHHH DIQHACEAGQTSCFTTGIDPGFANDLFPMTLLGVGGRVDSVLVQELLDYQYYNGDFSTPM HHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCEEECCCCCCCC GLGAPMDQPAVLEIPEVLILAWGHTIPMIADAVGVKLDKIDTVYEKWATPTEISYGSAPN CCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCC TGTIPAGHCAAVRFEIRGWVGGEPKIVIEHVNRITNDTAPQWPRAQSVDNDAYRIEIKGS CCCCCCCCEEEEEEEEEECCCCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCC PNITQETVFRDERSGDGAIGGCLATGMRAINAIPAVIDAKPGFLTPLDLPLIAGRGTIRI CCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHEECCCCCCCCCCCEEEECCCCCCC >Mature Secondary Structure SDKYPVIVWGTGVVGKLVIRELLDHPVFELAAVLVHDPAKDGVDVGTLVGSHPTGLAAT CCCCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHEECCCCCCCEEE TDIDAALGTEGTVAYFGPTAQYALENIDNMSRALRSGHNIVSTAMTPWVYPQVCPPEMLA CCCHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCEEHHHCCCCCCCCCCCHHHHH DIQHACEAGQTSCFTTGIDPGFANDLFPMTLLGVGGRVDSVLVQELLDYQYYNGDFSTPM HHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCEEECCCCCCCC GLGAPMDQPAVLEIPEVLILAWGHTIPMIADAVGVKLDKIDTVYEKWATPTEISYGSAPN CCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCC TGTIPAGHCAAVRFEIRGWVGGEPKIVIEHVNRITNDTAPQWPRAQSVDNDAYRIEIKGS CCCCCCCCEEEEEEEEEECCCCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCC PNITQETVFRDERSGDGAIGGCLATGMRAINAIPAVIDAKPGFLTPLDLPLIAGRGTIRI CCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHEECCCCCCCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA