| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627362
Identifier: 169627362
GI number: 169627362
Start: 259932
End: 260312
Strand: Reverse
Name: 169627362
Synonym: MAB_0257c
Alternate gene names: NA
Gene position: 260312-259932 (Counterclockwise)
Preceding gene: 169627363
Following gene: 169627361
Centisome position: 5.14
GC content: 64.3
Gene sequence:
>381_bases ATGACCAGTGACCCCGGTACGACGCCGGACTCTCCGGTTGTGGACTCATCGACCGAAATCCCCGTCGGGGAGCAGGCTCC GCTACCCGCCAAGTCCGGGTCCGCCAAGCCCAAGAAGAAAGAGGACGCGGTCACGCGGACTCGTGCGGCGGCAACGTGGA CCGGCGTCATCCTGGGCCTGCTCATCCTGATCCTGCTGCTGATCTTCATCACGCAGAACATGAACACGGTCACGACGACA TTTCTGGTCTGGCATCTCAATCTGCCGCTGGGCGTGACGGTGCTCATCGCCGCCGTGGCGGGTGCACTCCTGACCGCGCT GGTGGGCATCGTGCGCATCGTGCAACTGCGACGTGCCGCGAAGAAGAACCTGCGGGCCTAG
Upstream 100 bases:
>100_bases GCATGGAGCCTCGGTCTCCCCGGGTATCGAGCTGATCCCGTCCGCGAAAAGTCGAGCTCCTACGCTTGCAATCAGCGCCC ATGTAGCAAATGATGAACCC
Downstream 100 bases:
>100_bases CTGCCGACTACAGTCGGCGCATGACGGCGCTGCCCCGGCGTGGAAGAGCCCTGGCGCTTGTCCGGAAGACCCTCAAGGAC AAGCCCGTACCGCTGGCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MTSDPGTTPDSPVVDSSTEIPVGEQAPLPAKSGSAKPKKKEDAVTRTRAAATWTGVILGLLILILLLIFITQNMNTVTTT FLVWHLNLPLGVTVLIAAVAGALLTALVGIVRIVQLRRAAKKNLRA
Sequences:
>Translated_126_residues MTSDPGTTPDSPVVDSSTEIPVGEQAPLPAKSGSAKPKKKEDAVTRTRAAATWTGVILGLLILILLLIFITQNMNTVTTT FLVWHLNLPLGVTVLIAAVAGALLTALVGIVRIVQLRRAAKKNLRA >Mature_125_residues TSDPGTTPDSPVVDSSTEIPVGEQAPLPAKSGSAKPKKKEDAVTRTRAAATWTGVILGLLILILLLIFITQNMNTVTTTF LVWHLNLPLGVTVLIAAVAGALLTALVGIVRIVQLRRAAKKNLRA
Specific function: Unknown
COG id: COG5416
COG function: function code S; Uncharacterized integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13290; Mature: 13159
Theoretical pI: Translated: 11.13; Mature: 11.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSDPGTTPDSPVVDSSTEIPVGEQAPLPAKSGSAKPKKKEDAVTRTRAAATWTGVILGL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LILILLLIFITQNMNTVTTTFLVWHLNLPLGVTVLIAAVAGALLTALVGIVRIVQLRRAA HHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKNLRA HHHCCC >Mature Secondary Structure TSDPGTTPDSPVVDSSTEIPVGEQAPLPAKSGSAKPKKKEDAVTRTRAAATWTGVILGL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LILILLLIFITQNMNTVTTTFLVWHLNLPLGVTVLIAAVAGALLTALVGIVRIVQLRRAA HHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKNLRA HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA