Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

Click here to switch to the map view.

The map label for this gene is 169627304

Identifier: 169627304

GI number: 169627304

Start: 208913

End: 210406

Strand: Direct

Name: 169627304

Synonym: MAB_0199

Alternate gene names: NA

Gene position: 208913-210406 (Clockwise)

Preceding gene: 169627303

Following gene: 169627311

Centisome position: 4.12

GC content: 67.8

Gene sequence:

>1494_bases
ATGGGTTTGTTGCCGTCACGGAATTCTTTGAAGGGTCTGCGCCAGATAGGTGACGGGCTGGGCACGCTAGATCGGGAAGT
CTTCGAAGCCGTCGCGGAGTCACCGAGCCCGTTGCTTGACGCCGTCATGCCGCGCCTCACCCGCGCCGCCGACCACTCCA
AGCTGTGGATCGGAATCGGCGTCGGGCTGGCACTGTTCGGCAAGCCTGCCGCTGCCCGTGGTGCCACCCGTGGGCTGCTC
ACGTTGGCGGTGACCAGCGCCGTCACCAACCAGGTGGCCAAGCGGCTACGGCGGCGCGAGCGGCCGAACCACCTCTCGGT
GCCGCTGACGCGGCGCAGCCGGCGGGTGCCGACGTCGTCGTCATTGCCCTCAGGGCATTCGGCGAGTGCCGCGGCGTTCG
CGGTGGGAGTCGGCCTGGAAAGCCCGCCGCTGGGCTTTGGGCTCTCGCTGCTCGCCGGTTTGGTGGGGCTGTCCCGGGTG
GCGACCGGCGTCCACTACCCCGGCGACGTCTTCGCGGGATTTGGGATCGGTGCGGGACTGGCAGTCCTGGGCGCGCGCGT
GGTGCCGCCGATCGTGACGACGTCTGTTCCGACGGGCGAGCCGCTGCGGGTGGAAACACCCGCACGGCCCGGGGGCGAGG
GTGTCGTATTGGTGGTCAATCCGGCGTCCGGCGATGGCACCGGGCAGCGGATCCTGGAACAGGTGCGCAAAGCGCTGCCG
CGCACCGAAATTGTCGAGCTGAGCAAGGACGATGACGTCATCGAAGTGATGCGTGCGGCCGCGGGCCGGGCGGAGGTGCT
CGCGGTGGGAGGCGGCGACGGCACGGTGGCATGCGCTGCCGGTGTGGCGGTCGAGACCGACAGGCCGCTGGCGGTTTTCC
CCGGCGGCACCTTCAATCACTTCGCCAAGGACATCGGCTGCGAGAGCGTGGCCAAGACCGTCGACGCGATCCGACGGGGC
AGTGTCAGCCGAGTCGACCTGGTCTACCTGAACGAGCGCCAGGTGGTGATCAATACGGCGAGCATCGGTTCCTACCCCAA
GTTCGTGCAGGTCCGCGAGAAGCTCGAGCGCCGCATAGGCAAACCGCTGGCCGCCGTGTACGCGATGCTGTACGTGTTGC
GGCGCGATCACCCGGTGCGTATCCGGTTCGACAACAAGACGATTCAGACCTCACTGTTCTTTCTGGGTAATTCGGTCTAT
CTCCCGGCGGGTTTCGCGCCGTCCCTGCGCAGCCGGCTGGACGATGGCCTGATCGATGTGCGGATCCTGGAAACCGGTCG
CCGGTTCAGCGGTGTGCGGATCCTGACTGCGCTGGCACTGGGACGCTTGCAACGCAGCCCGCTCTACCACGAGCTGCAGG
TGCCCGAATTCACGTTCACCGCGGTGGATGGCCCTACCGTGCTCGCCCGCGATGGGGAAGCGGGCGACAGGTACACCGAG
GCGCACTTCACGGTGCGTTACCGGGCGCTGGCGGTGTTCCGTCCGCTGCCGTGA

Upstream 100 bases:

>100_bases
GGATCACGTGCACGTGTCCTTCCGGGCCGATGCCAAGCCCCCTGCCGTCAACTGCTGACAGACCACCCAGCCGTGCGGTG
TGCGGGATATGTTGGGCTGC

Downstream 100 bases:

>100_bases
CGGTCCACGGCGGCAGCGCCAACAGACACACGATGAAGTACGCGTAGCCCAGCGCCCACCCCGCCAGCACATCGGAGGGG
TTGTGCACGTTGAGTAGGAC

Product: phosphoesterase, PA-phosphatase related protein

Products: NA

Alternate protein names: Lipid Kinase; Diacylglycerol Kinase; Phosphoesterase PA-Phosphatase ; Phosphoesterase PA-Phosphatase Related Protein; Glycerophosphatase; Diacylglycerol Kinase Family Protein; PAP2 Superfamily Protein; Lipid Kinase YegS-Like Protein; Sphingosine/Diacylglycerol Kinase-Like; Diacylglycerol Kinase Catalytic Domain-Containing Protein; Sphingosine Kinase And Related Diacylglycerol Kinase; PA-Phosphatase-Like Phosphoesterase; Diacylglycerol Kinase Catalytic Subunit; Sphingosine Kinase; Related Diacylglycerol Kinase; Sphingosine Kinase-Like Protein; PAP2 Superfamily Domain Protein; PAP2 Superfamily Domain-Containing Protein; Sphingosine Kinase/Eukaryotic Diacylglycerol Kinase; LOW QUALITY PROTEIN Diacylglycerol Kinase; Diacylglycerol Kinase Catalytic Domain Protein

Number of amino acids: Translated: 497; Mature: 496

Protein sequence:

>497_residues
MGLLPSRNSLKGLRQIGDGLGTLDREVFEAVAESPSPLLDAVMPRLTRAADHSKLWIGIGVGLALFGKPAAARGATRGLL
TLAVTSAVTNQVAKRLRRRERPNHLSVPLTRRSRRVPTSSSLPSGHSASAAAFAVGVGLESPPLGFGLSLLAGLVGLSRV
ATGVHYPGDVFAGFGIGAGLAVLGARVVPPIVTTSVPTGEPLRVETPARPGGEGVVLVVNPASGDGTGQRILEQVRKALP
RTEIVELSKDDDVIEVMRAAAGRAEVLAVGGGDGTVACAAGVAVETDRPLAVFPGGTFNHFAKDIGCESVAKTVDAIRRG
SVSRVDLVYLNERQVVINTASIGSYPKFVQVREKLERRIGKPLAAVYAMLYVLRRDHPVRIRFDNKTIQTSLFFLGNSVY
LPAGFAPSLRSRLDDGLIDVRILETGRRFSGVRILTALALGRLQRSPLYHELQVPEFTFTAVDGPTVLARDGEAGDRYTE
AHFTVRYRALAVFRPLP

Sequences:

>Translated_497_residues
MGLLPSRNSLKGLRQIGDGLGTLDREVFEAVAESPSPLLDAVMPRLTRAADHSKLWIGIGVGLALFGKPAAARGATRGLL
TLAVTSAVTNQVAKRLRRRERPNHLSVPLTRRSRRVPTSSSLPSGHSASAAAFAVGVGLESPPLGFGLSLLAGLVGLSRV
ATGVHYPGDVFAGFGIGAGLAVLGARVVPPIVTTSVPTGEPLRVETPARPGGEGVVLVVNPASGDGTGQRILEQVRKALP
RTEIVELSKDDDVIEVMRAAAGRAEVLAVGGGDGTVACAAGVAVETDRPLAVFPGGTFNHFAKDIGCESVAKTVDAIRRG
SVSRVDLVYLNERQVVINTASIGSYPKFVQVREKLERRIGKPLAAVYAMLYVLRRDHPVRIRFDNKTIQTSLFFLGNSVY
LPAGFAPSLRSRLDDGLIDVRILETGRRFSGVRILTALALGRLQRSPLYHELQVPEFTFTAVDGPTVLARDGEAGDRYTE
AHFTVRYRALAVFRPLP
>Mature_496_residues
GLLPSRNSLKGLRQIGDGLGTLDREVFEAVAESPSPLLDAVMPRLTRAADHSKLWIGIGVGLALFGKPAAARGATRGLLT
LAVTSAVTNQVAKRLRRRERPNHLSVPLTRRSRRVPTSSSLPSGHSASAAAFAVGVGLESPPLGFGLSLLAGLVGLSRVA
TGVHYPGDVFAGFGIGAGLAVLGARVVPPIVTTSVPTGEPLRVETPARPGGEGVVLVVNPASGDGTGQRILEQVRKALPR
TEIVELSKDDDVIEVMRAAAGRAEVLAVGGGDGTVACAAGVAVETDRPLAVFPGGTFNHFAKDIGCESVAKTVDAIRRGS
VSRVDLVYLNERQVVINTASIGSYPKFVQVREKLERRIGKPLAAVYAMLYVLRRDHPVRIRFDNKTIQTSLFFLGNSVYL
PAGFAPSLRSRLDDGLIDVRILETGRRFSGVRILTALALGRLQRSPLYHELQVPEFTFTAVDGPTVLARDGEAGDRYTEA
HFTVRYRALAVFRPLP

Specific function: Unknown

COG id: COG1597

COG function: function code IR; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52868; Mature: 52737

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLLPSRNSLKGLRQIGDGLGTLDREVFEAVAESPSPLLDAVMPRLTRAADHSKLWIGIG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEC
VGLALFGKPAAARGATRGLLTLAVTSAVTNQVAKRLRRRERPNHLSVPLTRRSRRVPTSS
CHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCC
SLPSGHSASAAAFAVGVGLESPPLGFGLSLLAGLVGLSRVATGVHYPGDVFAGFGIGAGL
CCCCCCCCCHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHECCCHHHHH
AVLGARVVPPIVTTSVPTGEPLRVETPARPGGEGVVLVVNPASGDGTGQRILEQVRKALP
HHHHHHHCCCCEECCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCC
RTEIVELSKDDDVIEVMRAAAGRAEVLAVGGGDGTVACAAGVAVETDRPLAVFPGGTFNH
CCEEEECCCCCHHHHHHHHCCCCEEEEEEECCCCCEEEECCEEEECCCCEEEECCCCHHH
FAKDIGCESVAKTVDAIRRGSVSRVDLVYLNERQVVINTASIGSYPKFVQVREKLERRIG
HHHHHCHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHC
KPLAAVYAMLYVLRRDHPVRIRFDNKTIQTSLFFLGNSVYLPAGFAPSLRSRLDDGLIDV
CHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEEECCEEEECCCCCHHHHHHCCCCCEEE
RILETGRRFSGVRILTALALGRLQRSPLYHELQVPEFTFTAVDGPTVLARDGEAGDRYTE
EEECCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCEEEEECCCCEEEEECCCCCCCEEH
AHFTVRYRALAVFRPLP
EEEEEEEEEEEEECCCC
>Mature Secondary Structure 
GLLPSRNSLKGLRQIGDGLGTLDREVFEAVAESPSPLLDAVMPRLTRAADHSKLWIGIG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEC
VGLALFGKPAAARGATRGLLTLAVTSAVTNQVAKRLRRRERPNHLSVPLTRRSRRVPTSS
CHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCC
SLPSGHSASAAAFAVGVGLESPPLGFGLSLLAGLVGLSRVATGVHYPGDVFAGFGIGAGL
CCCCCCCCCHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHECCCHHHHH
AVLGARVVPPIVTTSVPTGEPLRVETPARPGGEGVVLVVNPASGDGTGQRILEQVRKALP
HHHHHHHCCCCEECCCCCCCCEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCC
RTEIVELSKDDDVIEVMRAAAGRAEVLAVGGGDGTVACAAGVAVETDRPLAVFPGGTFNH
CCEEEECCCCCHHHHHHHHCCCCEEEEEEECCCCCEEEECCEEEECCCCEEEECCCCHHH
FAKDIGCESVAKTVDAIRRGSVSRVDLVYLNERQVVINTASIGSYPKFVQVREKLERRIG
HHHHHCHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHC
KPLAAVYAMLYVLRRDHPVRIRFDNKTIQTSLFFLGNSVYLPAGFAPSLRSRLDDGLIDV
CHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEEECCEEEECCCCCHHHHHHCCCCCEEE
RILETGRRFSGVRILTALALGRLQRSPLYHELQVPEFTFTAVDGPTVLARDGEAGDRYTE
EEECCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCEEEEECCCCEEEEECCCCCCCEEH
AHFTVRYRALAVFRPLP
EEEEEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA